FC878222
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878222 vs. ExPASy Swiss-Prot
Match: AT2C1_PONAB (Calcium-transporting ATPase type 2C member 1 OS=Pongo abelii GN=ATP2C1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.364e-13 Identity = 42/139 (30.22%), Postives = 77/139 (55.40%), Query Frame = 1 Query: 304 MLEADIKQGISSHEVEQRRKRYGWNEIT-TEKENLFIKFLGFFTGPVLYVMELAVLLAAGLRDWIDFGVIIGILLLNAVVGWYQEKQAADVVASLKGDIAMKATVVRDGQESDIKARELVPGDIIIIEEGESVPADARL 717 +L+AD++ G++ EV RR +GWNE +E E L+ K++ F P++ ++ + +++ + + D I +L+ V + QE ++ + L + + VR+G+ AR+LVPGD + + G+ VPAD RL Sbjct: 37 ILQADLQNGLNKCEVSHRRAFHGWNEFDISEDEPLWKKYISQFKNPLIMLLLASAVISVLMHQFDDAVSITVAILIVVTVAFVQEYRSEKSLEELSKLVPPECHCVREGKLEHTLARDLVPGDTVCLSVGDRVPADLRL 175
BLAST of FC878222 vs. ExPASy Swiss-Prot
Match: AT2C1_HUMAN (Calcium-transporting ATPase type 2C member 1 OS=Homo sapiens GN=ATP2C1 PE=1 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 4.364e-13 Identity = 42/139 (30.22%), Postives = 77/139 (55.40%), Query Frame = 1 Query: 304 MLEADIKQGISSHEVEQRRKRYGWNEIT-TEKENLFIKFLGFFTGPVLYVMELAVLLAAGLRDWIDFGVIIGILLLNAVVGWYQEKQAADVVASLKGDIAMKATVVRDGQESDIKARELVPGDIIIIEEGESVPADARL 717 +L+AD++ G++ EV RR +GWNE +E E L+ K++ F P++ ++ + +++ + + D I +L+ V + QE ++ + L + + VR+G+ AR+LVPGD + + G+ VPAD RL Sbjct: 37 ILQADLQNGLNKCEVSHRRAFHGWNEFDISEDEPLWKKYISQFKNPLIMLLLASAVISVLMHQFDDAVSITVAILIVVTVAFVQEYRSEKSLEELSKLVPPECHCVREGKLEHTLARDLVPGDTVCLSVGDRVPADLRL 175
BLAST of FC878222 vs. ExPASy Swiss-Prot
Match: AT2C1_BOVIN (Calcium-transporting ATPase type 2C member 1 OS=Bos taurus GN=ATP2C1 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.700e-13 Identity = 44/148 (29.73%), Postives = 79/148 (53.38%), Query Frame = 1 Query: 304 MLEADIKQGISSHEVEQRRKRYGWNEIT-TEKENLFIKFLGFFTGPVLYVMELAVLLAAGLRDWIDFGVIIGILLLNAVVGWYQEKQAADVVASLKGDIAMKATVVRDGQESDIKARELVPGDIIIIEEGESVPADARLICDYDAPED 744 +L+AD++ G++ EV RR +GWNE +E E L+ K++ F P++ ++ + +++ + + D I +L+ V + QE ++ + L + + VR+G+ AR+LVPGD + + G+ VPAD RL D D Sbjct: 71 ILQADLQNGLNKCEVSHRRAFHGWNEFDISEDEPLWKKYISQFKNPLIMLLLASAVISVLMHQFDDAVSITVAILIVVTVAFVQEYRSEKSLEELSKLMPPECHCVREGKLEHTLARDLVPGDTVCLSVGDRVPADLRLFEAVDLSVD 218
BLAST of FC878222 vs. ExPASy Swiss-Prot
Match: AT2C2_MOUSE (Calcium-transporting ATPase type 2C member 2 OS=Mus musculus GN=Atp2c2 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.444e-13 Identity = 48/169 (28.40%), Postives = 87/169 (51.48%), Query Frame = 1 Query: 316 DIKQGISSHEVEQRRKRYGWNEITTEK-ENLFIKFLGFFTGPVLYVMELAVLLAAGLRDWIDFGVIIGILLLNAVVGWYQEKQAADVVASLKGDIAMKATVVRDGQESDIKARELVPGDIIIIEEGESVPADARLICDYDAPEDFATYKELREQHALNPEEDPAGSEDA 819 D+ G+S V QRR +GWNE T+ E ++ K+L F P++ ++ + +++ +++ D I +L+ VG+ QE ++ + L + + +RDG+ + AR+LVPGDI+ + G+ +PAD RL D L ++ + E +P G D+ Sbjct: 70 DLDSGLSEFAVAQRRLVHGWNEFVTDNAEPVWKKYLDQFRNPLILLLLGSSVVSVLTKEYEDAVSIALAVLIVVTVGFIQEYRSEKSLEELTKLVPPECNCLRDGKLRHMLARDLVPGDIVSLSMGDRIPADIRLTEVTDL---------LVDESSFTGEVEPCGKTDS 229
BLAST of FC878222 vs. ExPASy Swiss-Prot
Match: ATC1_ANOGA (Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type OS=Anopheles gambiae GN=Ca-P60A PE=3 SV=5) HSP 1 Score: 73.9442 bits (180), Expect = 1.270e-12 Identity = 50/159 (31.45%), Postives = 90/159 (56.60%), Query Frame = 1 Query: 298 DEMLE---ADIKQGISSHEVEQRRKRYGWNEITTEK-ENLFIKFLGFFTGPVLYVMELAVLLA---------AGLRDWIDFGVIIGILLLNAVVGWYQEKQAADVVASLKGDIAMKATVVRDGQES--DIKARELVPGDIIIIEEGESVPADARLICDY 729 DE+L D ++G+S +V++ +K+YG NE+ E+ + L+ L F ++ ++ LA +++ G+ +++ VI+ IL+ NAVVG +QE+ A + +LK V+R + I+A+E+VPGD++ + G+ +PAD RLI Y Sbjct: 10 DEVLSHFRVDPERGLSLDQVKEYQKKYGPNELPAEEGKTLWQLVLEQFDDLLVKILLLAAIISFVLALFEEHEGVEAFVEPFVILLILIANAVVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKIRAKEIVPGDVVEVSVGDKIPADIRLIKIY 168
BLAST of FC878222 vs. ExPASy Swiss-Prot
Match: AT2C2_RAT (Calcium-transporting ATPase type 2C member 2 OS=Rattus norvegicus GN=Atp2c2 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.166e-12 Identity = 41/135 (30.37%), Postives = 76/135 (56.30%), Query Frame = 1 Query: 316 DIKQGISSHEVEQRRKRYGWNEITTEK-ENLFIKFLGFFTGPVLYVMELAVLLAAGLRDWIDFGVIIGILLLNAVVGWYQEKQAADVVASLKGDIAMKATVVRDGQESDIKARELVPGDIIIIEEGESVPADARL 717 D+ G+S V QRR +GWNE T+ E ++ K+L F P++ ++ + +++ +++ D I +L+ VG+ QE ++ + L + + +RDG+ + AR+LVPGD++ + G+ +PAD RL Sbjct: 70 DLDSGLSEFAVAQRRLVHGWNEFVTDNTEPVWKKYLDQFRNPLILLLLGSSVVSVLTKEYEDAISIALAVLIVVTVGFIQEYRSEKSLEELTKLVPPECNCLRDGKLRHMLARDLVPGDVVSLSMGDRIPADIRL 204
BLAST of FC878222 vs. ExPASy Swiss-Prot
Match: ATC_ARTSF (Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type OS=Artemia sanfranciscana PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.829e-12 Identity = 50/151 (33.11%), Postives = 84/151 (55.63%), Query Frame = 1 Query: 316 DIKQGISSHEVEQRRKRYGWNEITTEK-ENLFIKFLGFFTGPVLYVMELAVLL-------------AAGLRDWIDFGVIIGILLLNAVVGWYQEKQAADVVASLKGDIAMKATVVRDGQES--DIKARELVPGDIIIIEEGESVPADARLI 720 D ++G++ +V++ +++YG NE+ E+ ++L L F ++ ++ LA ++ A L +++ VI+ IL+ NAVVG +QEK A + +LK V+R + IKAR+LVPGDI+ I G+ +PAD RLI Sbjct: 19 DPERGLALEQVKKNQEKYGPNELPAEEGKSLLTLILEQFDDLLVKILLLAAIISLVLALFEEHDDEAEQLTAYVEPFVILLILIANAVVGVWQEKNAESAIEALKEYEPEMGKVIRADKTGIQKIKARDLVPGDIVEISVGDKIPADLRLI 169
BLAST of FC878222 vs. ExPASy Swiss-Prot
Match: AT2C2_HUMAN (Calcium-transporting ATPase type 2C member 2 OS=Homo sapiens GN=ATP2C2 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.829e-12 Identity = 40/135 (29.63%), Postives = 74/135 (54.81%), Query Frame = 1 Query: 316 DIKQGISSHEVEQRRKRYGWNEITTEK-ENLFIKFLGFFTGPVLYVMELAVLLAAGLRDWIDFGVIIGILLLNAVVGWYQEKQAADVVASLKGDIAMKATVVRDGQESDIKARELVPGDIIIIEEGESVPADARL 717 D+ G+S V QRR +GWNE + E ++ K+L F P++ ++ + L++ +++ D I +L+ V + QE ++ + L + + +R+G+ + ARELVPGD++ + G+ +PAD RL Sbjct: 72 DLHTGLSEFSVTQRRLAHGWNEFVADNSEPVWKKYLDQFKNPLILLLLGSALVSVLTKEYEDAVSIATAVLVVVTVAFIQEYRSEKSLEELTKMVPPECNCLREGKLQHLLARELVPGDVVSLSIGDRIPADIRL 206
BLAST of FC878222 vs. ExPASy Swiss-Prot
Match: ATC1_YEAST (Calcium-transporting ATPase 1 OS=Saccharomyces cerevisiae GN=PMR1 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.231e-12 Identity = 50/143 (34.97%), Postives = 77/143 (53.85%), Query Frame = 1 Query: 301 EMLEADIKQGI-SSHEVEQRRKRYGWNEITTEK-ENLFIKFLGFFTGPVLYVMELAVLLAAGLRDWIDFGVIIGILLLNAV-VGWYQEKQAADVVASLKGDIAMKATVVRDGQESDIKARELVPGDIIIIEEGESVPADARLI 720 E L+ D G+ SS+E RR YG NEIT E E+LF KFL F + ++ + + + ID V I + + V VG+ QE ++ + +L + + ++R GQES + A LVPGD++ G+ +PAD R+I Sbjct: 48 EKLDTDKNGGLRSSNEANNRRSLYGPNEITVEDDESLFKKFLSNFIEDRMILLLIGSAVVSLFMGNIDDAVSITLAIFIVVTVGFVQEYRSEKSLEALNKLVPAECHLMRCGQESHVLASTLVPGDLVHFRIGDRIPADIRII 190
BLAST of FC878222 vs. ExPASy Swiss-Prot
Match: AT2A3_MOUSE (Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Mus musculus GN=Atp2a3 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 8.231e-12 Identity = 50/145 (34.48%), Postives = 82/145 (56.55%), Query Frame = 1 Query: 328 GISSHEVEQRRKRYGWNEITTEK-ENLFIKFLGFFTGPVLYVMELAVLLAAGLRDWIDFG-----------VIIGILLLNAVVGWYQEKQAADVVASLKGDIAMKATVVRDGQES--DIKARELVPGDIIIIEEGESVPADARLI 720 G+S +V R+RYG NE+ TE+ ++L+ + F ++ ++ LA L++ L W + G VI+ IL+ NA+VG +QE+ A + +LK V+R ++ I+AR++VPGDI+ + G+ VPAD RLI Sbjct: 23 GLSLEQVTDARERYGPNELPTEEGKSLWELVVEQFEDLLVRILLLAALVSFVLA-WFEEGEETTTAFVEPLVIMLILVANAIVGVWQERNAESAIEALKEYEPEMGKVIRSDRKGVQRIRARDIVPGDIVEVAVGDKVPADLRLI 166 The following BLAST results are available for this feature:
BLAST of FC878222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878222 ID=FC878222; Name=FC878222; organism=Citrus clementina; type=EST; length=862bpback to top |