FC878222
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878222 vs. ExPASy Swiss-Prot
Match: ATC1_SCHPO (Calcium-transporting ATPase 1 OS=Schizosaccharomyces pombe GN=pmr1 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.404e-11 Identity = 45/141 (31.91%), Postives = 79/141 (56.03%), Query Frame = 1 Query: 307 LEADIKQGISS-HEVEQRRKRYGWNEITTE-KENLFIKFLGFFTGPVLYVMELAVLLAAGLRDWIDFGVIIGILLLNAV-VGWYQEKQAADVVASLKGDIAMKATVVRDGQESDIKARELVPGDIIIIEEGESVPADARLI 720 LE D+ G+SS E+ +R K +G N++ E +EN+ ++FL F L ++ A + ID + I + ++ V VG+ QE ++ + +L + V+R G+ I A +LVPGD++I++ G+ VPAD R++ Sbjct: 17 LETDMYNGLSSLQEITRRNKVHGDNDLKVEDEENMVVQFLKQFVKDPLILLLFASSAISVTLGNIDDAISIALAIVIVVTVGFVQEYRSEQSLKALNNLVPHYCNVIRSGKTEHIVASKLVPGDLVILQIGDRVPADLRIV 157
BLAST of FC878222 vs. ExPASy Swiss-Prot
Match: AT2A3_RAT (Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus GN=Atp2a3 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.834e-11 Identity = 49/145 (33.79%), Postives = 82/145 (56.55%), Query Frame = 1 Query: 328 GISSHEVEQRRKRYGWNEITTEK-ENLFIKFLGFFTGPVLYVMELAVLLAAGLRDWIDFG-----------VIIGILLLNAVVGWYQEKQAADVVASLKGDIAMKATVVRDGQES--DIKARELVPGDIIIIEEGESVPADARLI 720 G++ +V R+RYG NE+ TE+ ++L+ + F ++ ++ LA L++ L W + G VI+ IL+ NA+VG +QE+ A + +LK V+R ++ I+AR++VPGDI+ + G+ VPAD RLI Sbjct: 23 GLTLEQVTDARERYGPNELPTEEGKSLWELVVEQFEDLLVRILLLAALVSFVLA-WFEEGEETTTAFVEPLVIMLILVANAIVGVWQERNAESAIEALKEYEPEMGKVIRSDRKGVQRIRARDIVPGDIVEVAVGDKVPADLRLI 166
BLAST of FC878222 vs. ExPASy Swiss-Prot
Match: AT2A3_CHICK (Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Gallus gallus GN=ATP2A3 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.834e-11 Identity = 49/145 (33.79%), Postives = 80/145 (55.17%), Query Frame = 1 Query: 328 GISSHEVEQRRKRYGWNEITTE-KENLFIKFLGFFTGPVLYVMELAVLLAAGLRDWIDFG-----------VIIGILLLNAVVGWYQEKQAADVVASLKGDIAMKATVVRDGQES--DIKARELVPGDIIIIEEGESVPADARLI 720 G+S +V + R++YG NE+ E +++L+ L F ++ ++ +A L+ L W + G VII IL+ NAVVG +QE+ A + +LK V+R + I+AR++VPGDI+ + G+ VPAD R+I Sbjct: 23 GLSPEQVRRNREKYGPNELPAEERKSLWELVLEQFEDLLVRILLMAAFLSFILA-WFEEGEESTTAFVEPIVIIMILIANAVVGVWQERNAESAIEALKEYEPEMGKVIRADRSGVQRIRARDIVPGDIVEVAVGDKVPADIRII 166
BLAST of FC878222 vs. ExPASy Swiss-Prot
Match: AT2A3_HUMAN (Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Homo sapiens GN=ATP2A3 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.395e-11 Identity = 50/145 (34.48%), Postives = 82/145 (56.55%), Query Frame = 1 Query: 328 GISSHEVEQRRKRYGWNEITTEK-ENLFIKFLGFFTGPVLYVMELAVLLAAGLRDWIDFG-----------VIIGILLLNAVVGWYQEKQAADVVASLKGDIAMKATVVRDGQES--DIKARELVPGDIIIIEEGESVPADARLI 720 G+S +V R+RYG NE+ +E+ ++L+ L F ++ ++ LA L++ L W + G VI+ IL+ NA+VG +QE+ A + +LK V+R ++ I+AR++VPGDI+ + G+ VPAD RLI Sbjct: 23 GLSPAQVTGARERYGPNELPSEEGKSLWELVLEQFEDLLVRILLLAALVSFVLA-WFEEGEETTTAFVEPLVIMLILVANAIVGVWQERNAESAIEALKEYEPEMGKVIRSDRKGVQRIRARDIVPGDIVEVAVGDKVPADLRLI 166
BLAST of FC878222 vs. ExPASy Swiss-Prot
Match: AT2A1_RANES (Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rana esculenta GN=ATP2A1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.128e-11 Identity = 51/145 (35.17%), Postives = 81/145 (55.86%), Query Frame = 1 Query: 328 GISSHEVEQRRKRYGWNEITTEK-ENLFIKFLGFFTGPVLYVMELAVLLAAGLRDWIDFG-----------VIIGILLLNAVVGWYQEKQAADVVASLKGDIAMKATVVRDGQES--DIKARELVPGDIIIIEEGESVPADARLI 720 G+S +V++ ++G NE+ E+ ++L+ F ++ ++ LA +++ L W + G VI+ IL+ NAVVG +QE+ A D + +LK V R ++S IKARELVPGDI+ + G+ VPAD RLI Sbjct: 23 GLSLDQVKKNFDKFGPNELPAEEGKSLWELVAEQFEDLLVRILLLAAIISFVLA-WFEEGEETVTAFVEPFVILLILIANAVVGVWQERNAEDAIEALKEYEPEMGKVYRSDRKSVQRIKARELVPGDIVEVAVGDKVPADIRLI 166
BLAST of FC878222 vs. ExPASy Swiss-Prot
Match: ATP4A_XENLA (Potassium-transporting ATPase alpha chain 1 OS=Xenopus laevis GN=atp4a PE=2 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 5.335e-11 Identity = 49/179 (27.37%), Postives = 88/179 (49.16%), Query Frame = 1 Query: 298 DEMLEADIKQGISSHEVEQRRKRYGWNEITTEKENL-FIKFLGFFTGPV---LYVMELAVLLAAGLR---------DWIDFGV-IIGILLLNAVVGWYQEKQAADVVASLKGDIAMKATVVRDGQESDIKARELVPGDIIIIEEGESVPADARLICDYDAPEDFATYKELREQHALNPE 792 ++ + +G+ S + R G NE+ K +IKF G + ++V + L+A G+ D + + +I ++++ G+YQE ++ +++AS K + +ATVVRDG + I A +LV GD++ I+ G+ VPAD R+I D ++ E +PE Sbjct: 59 EQKYTTSVSKGLKSAFAAEVILRDGPNELKPPKGTPEYIKFARQLAGGLQCLMWVAAVICLIAFGIEESQGDLTSADNLYLAITLIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVVRDGDKFQINANQLVVGDLVEIKGGDRVPADIRIITSQGCKVDNSSLTGESEPQTRSPE 237
BLAST of FC878222 vs. ExPASy Swiss-Prot
Match: AT1A1_CATCO (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Catostomus commersoni GN=atp1a1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.335e-11 Identity = 48/173 (27.75%), Postives = 89/173 (51.45%), Query Frame = 1 Query: 316 DIKQGISSHEVEQRRKRYGWNEIT----TEKENLFIK--FLGF----FTGPVLYVMELAVLLAAG---LRDWIDFGVIIG-ILLLNAVVGWYQEKQAADVVASLKGDIAMKATVVRDGQESDIKARELVPGDIIIIEEGESVPADARLICDYDAPEDFATYKELREQHALNPE 792 D+ +G+S+ E+ R G N +T T + F K F GF +TG VL + +L A D + GV++ ++++ +YQ+ +++ ++ S K + +A VVRDG++ I A E+V GD++ ++ G+ +PAD R+I + D ++ E +P+ Sbjct: 61 DLSKGLSNSRAEEILARDGPNALTPPPTTPEWVKFCKQMFGGFSMLLWTGAVLCFLAYGILAAMEDEPANDNLYLGVVLSAVVIITGCFSYYQDAKSSKIMDSFKNLVPQQALVVRDGEKKQINAEEVVIGDLVEVKGGDRIPADLRIISSHGCKVDNSSLTGESEPQTRSPD 233
BLAST of FC878222 vs. ExPASy Swiss-Prot
Match: ATC1_DUNBI (Cation-transporting ATPase CA1 OS=Dunaliella bioculata GN=CA1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.968e-11 Identity = 48/148 (32.43%), Postives = 76/148 (51.35%), Query Frame = 1 Query: 316 DIKQGISSHEVEQRRKRYGWNEITTEKENLFIKFLGFFTGPVLYVMELAVLLAAGLRDWI--------------DFGVIIGILLLNAVVGWYQEKQAADVVASLKGDIAMKATVVRDGQESDIKARELVPGDIIIIEEGESVPADARL 717 D+ +G+S +V+Q R +YG N++ E+ K + +L + +LL A + D+I + VI+ IL+ NA VG E+ A + LK A ATV+R+GQ I + ++VPGDI+ + G VPAD R+ Sbjct: 42 DLDRGLSDRDVQQARIKYGRNQMEAEQSTPLWKLILKQFDDLL----VKILLGAAIVDFIIAISEGESIQSGLIEPMVILLILVANATVGVVTERNAEKAIEQLKSYEADDATVLRNGQLQLIPSADIVPGDIVELAVGNKVPADTRV 185
BLAST of FC878222 vs. ExPASy Swiss-Prot
Match: AT2A1_MAKNI (Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Makaira nigricans GN=atp2a1 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 9.100e-11 Identity = 45/145 (31.03%), Postives = 81/145 (55.86%), Query Frame = 1 Query: 328 GISSHEVEQRRKRYGWNEITTEK-ENLFIKFLGFFTGPVLYVMELAVLLAAGLRDWIDFG-----------VIIGILLLNAVVGWYQEKQAADVVASLKGDIAMKATVVRDGQES--DIKARELVPGDIIIIEEGESVPADARLI 720 G+S + ++ ++G+NE+ E+ ++++ + F ++ ++ LA ++ L W + G VI+ IL+ NA+VG +QE+ A D + +LK V R ++S IKARE+VPGDI+ + G+ VPAD R++ Sbjct: 23 GLSPDQFKKNLDKFGYNELPAEEGKSIWDLIVEQFEDLLVRILLLAACISFVLA-WFEEGEETITAFVEPFVILLILIANAIVGVWQERNAEDAIEALKEYEPEMGKVYRSDRKSVQRIKAREIVPGDIVEVSVGDKVPADIRIV 166
BLAST of FC878222 vs. ExPASy Swiss-Prot
Match: AT1A_HYDAT (Sodium/potassium-transporting ATPase subunit alpha OS=Hydra attenuata PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.100e-11 Identity = 40/153 (26.14%), Postives = 83/153 (54.25%), Query Frame = 1 Query: 304 MLEADIKQGISSHEVEQRRKRYGWNEITTEKENL-FIKFLGFFTGP---VLYVMELAVLLAAGLR---------DWIDFGVIIGIL-LLNAVVGWYQEKQAADVVASLKGDIAMKATVVRDGQESDIKARELVPGDIIIIEEGESVPADARLI 720 M E +++G+S + V + +R G N +T K+ ++KF G +L++ + A G+R D + G+++ ++ ++ +YQE +++ ++ S K I +A V+RDG++ I A + V GD++ ++ G+ +PAD R++ Sbjct: 60 MYETSLEKGLSENIVARNLERDGLNALTPPKQTPEWVKFCKQMFGGFSMLLWIGAILCFFAFGIRAVRDTNPNMDELYLGIVLSVVVIITGCFSYYQESKSSKIMESFKKMIPQEALVLRDGKKITINAEQCVVGDVVFVKFGDRIPADIRIV 212 The following BLAST results are available for this feature:
BLAST of FC878222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878222 ID=FC878222; Name=FC878222; organism=Citrus clementina; type=EST; length=862bpback to top |