FC878232
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878232 vs. ExPASy Swiss-Prot
Match: GPI8_PONAB (GPI-anchor transamidase OS=Pongo abelii GN=PIGK PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.354e-22 Identity = 73/255 (28.63%), Postives = 119/255 (46.67%), Query Frame = 3 Query: 21 TMTRLASGVLITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHP------HGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEESS 767 +++R AS + LL++ +A + +A +FF +G WAVL+ S ++NYRH A+ Y+ +++ G+ D +I++ + DD+A N NP+P + +H +GDD V DY +VTVENF V+ G T S +++ S +I I+ + HGG G L S I EL D ++ Y L+F ++ C+ S++E NI A +S E S Sbjct: 6 SLSRAASTLAAVLLLSFGSVAASH---------IEDQAEQFFRSGHTN------------NWAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNPRNPKPATVFSHKNMELNVYGDD----VEVDYRSYEVTVENFLRVLTGRIPPSTPRSKRLL-SDDRSNILIYMTGHGGNGFLKFQDSEEITNIELADAFEQMWQKRRYNELLFIIDTCQGASMYERFYSP--NIMALASSQVGEDS 232
BLAST of FC878232 vs. ExPASy Swiss-Prot
Match: GPI8_YEAST (GPI-anchor transamidase OS=Saccharomyces cerevisiae GN=GPI8 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.380e-22 Identity = 60/199 (30.15%), Postives = 107/199 (53.77%), Query Frame = 3 Query: 204 WAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINH-PHGDDVY-KGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEESSWGTYCPGEI 794 WAVL++ S ++NYRH A++ Y+ +++ G+ D II+ + DD+A N N PG + N+ H D+Y V DY G +VTVENF ++ T S +++ + N +IFI+ + HGG L + I ++++ D ++ + Y + F ++ C++ +++ NI A +S +ESS+ + EI Sbjct: 39 WAVLVSTSRFWFNYRHMANVLSMYRTVKRLGIPDSQIILMLSDDVACNSRNLFPGSVFNNKDHAIDLYGDSVEVDYRGYEVTVENFIRLLTDRWTEDHPKSKRLL-TDENSNIFIYMTGHGGDDFLKFQDAEEIASEDIADAFQQMYEKKRYNEIFFMIDTCQANTMYSKFYSP--NILAVGSSEMDESSYSHHSDVEI 234
BLAST of FC878232 vs. ExPASy Swiss-Prot
Match: GPI8_HUMAN (GPI-anchor transamidase OS=Homo sapiens GN=PIGK PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 9.758e-22 Identity = 74/250 (29.60%), Postives = 116/250 (46.40%), Query Frame = 3 Query: 36 ASGVLITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHP------HGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEESS 767 A+ VL T+L+ G S + +A +FF +G WAVL+ S ++NYRH A+ Y+ +++ G+ D +I++ + DD+A N NP+P + +H +GDD V DY +VTVENF V+ G T S +++ S +I I+ + HGG G L S I EL D ++ Y L+F ++ C+ S++E NI A +S E S Sbjct: 10 AATVLATVLLLSFGSVAASH--------IEDQAEQFFRSGHTN------------NWAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNPRNPKPATVFSHKNMELNVYGDD----VEVDYRSYEVTVENFLRVLTGRIPPSTPRSKRLL-SDDRSNILIYMTGHGGNGFLKFQDSEEITNIELADAFEQMWQKRRYNELLFIIDTCQGASMYERFYSP--NIMALASSQVGEDS 232
BLAST of FC878232 vs. ExPASy Swiss-Prot
Match: GPI8_BOVIN (GPI-anchor transamidase OS=Bos taurus GN=PIGK PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.758e-22 Identity = 63/194 (32.47%), Postives = 99/194 (51.03%), Query Frame = 3 Query: 204 WAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHP------HGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEESS 767 WAVL+ S ++NYRH A+ Y+ +++ G+ D +I++ + DD+A N NP+P + +H +GDD V DY +VTVENF V+ G + T S +++ S +I I+ + HGG G L S I EL D ++ Y L+F ++ C+ S++E NI A +S E S Sbjct: 46 WAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNPRNPKPATVYSHKNMELNVYGDD----VEVDYRSYEVTVENFLRVLTGRIPSSTPRSKRLL-SDDRSNILIYMTGHGGNGFLKFQDSEEITNIELADAFEQMWQKRRYNELLFIIDTCQGASMYERFYSP--NIMALASSQVGEDS 232
BLAST of FC878232 vs. ExPASy Swiss-Prot
Match: GPI8_PIG (GPI-anchor transamidase OS=Sus scrofa GN=PIGK PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 6.325e-21 Identity = 63/194 (32.47%), Postives = 97/194 (50.00%), Query Frame = 3 Query: 204 WAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHP------HGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEESS 767 WAVL+ S ++NYRH A+ Y+ +++ G+ D +I++ + DD+A N NP+P + +H +GDD V DY VTVENF V+ G T S +++ S +I I+ + HGG G L S I EL D ++ Y L+F ++ C+ S++E NI A +S E S Sbjct: 46 WAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNPRNPKPATVYSHKNMELNVYGDD----VEVDYRSYVVTVENFLRVLTGRIPPSTPRSKRLL-SDDRSNILIYMTGHGGNGFLKFQDSEEITNIELADAFEQMWQKRRYNELLFIIDTCQGASMYERFYSP--NIMALASSQVGEDS 232
BLAST of FC878232 vs. ExPASy Swiss-Prot
Match: GPI8_CAEEL (Putative GPI-anchor transamidase OS=Caenorhabditis elegans GN=T05E11.6 PE=1 SV=3) HSP 1 Score: 99.3673 bits (246), Expect = 3.139e-20 Identity = 58/210 (27.62%), Postives = 108/210 (51.43%), Query Frame = 3 Query: 150 NGGGGAKVNDDDDSVG--TRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVY-KGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEESSW 770 N G K+++ D+ G WAVL+ S ++NYRH +++ Y +++ G+ D NII+ + +D+ N NPRPG + G ++Y V DY GE+VTVE+F V+ G T S +++ + ++ I+ + HGG + S + +L ++ Y ++ ++C S S++E + + N+ + ++S E S+ Sbjct: 19 NTGLQLKIDELFDTPGHTNNWAVLVCTSKFWFNYRHVSNVLALYHSIKRLGIPDSNIIMMLAEDVPCNSRNPRPGTVYAARAGTNLYGSDVEVDYRGEEVTVESFIRVLTGRHHPATPRSKRLL-TDHQSNVLIYLTGHGGDSFMKFQDSEELTNVDLAYAIQTMFEDNRYHEMLVIADSCRSASMYEWI--DSPNVLSLSSSLTHEESY 225
BLAST of FC878232 vs. ExPASy Swiss-Prot
Match: GPI8_SCHPO (GPI-anchor transamidase OS=Schizosaccharomyces pombe GN=gpi8 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.722e-18 Identity = 55/206 (26.70%), Postives = 106/206 (51.46%), Query Frame = 3 Query: 183 DDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVII-NHPHGDDVY-KGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEESSWGTYCPGEI 794 + S WAVL++ S ++NYRH A++ Y+ +++ G+ D II+ + DD A N N PG + N D+Y + + DY G +VTVE F ++ T S +++ + +I I+ + HGG G + + + +++L D +++ H Y ++F ++ C++ S++ + N+ A +S SS+ + +I Sbjct: 20 ESSHTNNWAVLISTSRFWFNYRHTANVLGIYRSVKRLGIPDSQIILMIADDYACNSRNLFPGTVFDNADRALDLYGEEIEIDYKGYEVTVEAFIRLLTERVPENTPASKRLL-TNERSNILIYMTGHGGDGFIKFQDAEELSSEDLADAIEQIHQHKRYNEILFMVDTCQANSLYTKIYSP--NVLAIGSSEVGTSSYSHHADIDI 222 The following BLAST results are available for this feature:
BLAST of FC878232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878232 ID=FC878232; Name=FC878232; organism=Citrus clementina; type=EST; length=928bpback to top |