FC878236
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878236 vs. ExPASy Swiss-Prot
Match: PDE12_MOUSE (2',5'-phosphodiesterase 12 OS=Mus musculus GN=Pde12 PE=2 SV=2) HSP 1 Score: 61.2326 bits (147), Expect = 4.771e-14 Identity = 41/109 (37.61%), Postives = 58/109 (53.21%), Query Frame = 1 Query: 352 VSYNILGDKNA---FKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRYF---DILNVMEKTGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKE 660 VSYNIL D A F LY ++ + R+ LI +EL G N D+IC+QEVDR ++ +E G G ++ + +G A F++ KFRLL Q I F+E Sbjct: 297 VSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDRAVFSDSLVPALEAFGLEGVFRIK---QHEGLATFYRKSKFRLLSQHDISFQE 402 HSP 2 Score: 37.7354 bits (86), Expect = 4.771e-14 Identity = 25/91 (27.47%), Postives = 44/91 (48.35%), Query Frame = 2 Query: 641 QALNLKSLAFVKMWHNFPLLR----QMRNTKSRRVLVGNIHVLYNPNRGEVKLGQI-CFLSSRAQIVAEKWGNIPVVLAGDFNITLQSAIY 898 + L L LA K+ +L+ Q S+++ V N H+ ++P G ++L Q+ L + + + IPV+ GDFN T + +Y Sbjct: 415 EKLALNPLAQEKVLQRSSVLQISVLQSTTDSSKKICVANTHLYWHPKGGYIRLIQMEVALVHIRHVSRDLYPGIPVIFCGDFNSTPSTGMY 505
BLAST of FC878236 vs. ExPASy Swiss-Prot
Match: CN6LA_XENLA (CCR4-NOT transcription complex subunit 6-like-A OS=Xenopus laevis GN=cnot6l-A PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.783e-14 Identity = 46/144 (31.94%), Postives = 78/144 (54.17%), Query Frame = 1 Query: 283 PDVLRH--WIDA-DPNPISSQERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVD--RYFDI-LNVMEKTGYAGCYKRRTG---------DNVDGCAMFWKADKFRLLEQTSIEFKEFGL 669 P+ L H WI + + I F+V+ YN+L DK A R LY + W RK+ I E+I + DII +QEV+ +YF + + +E+ GY G + ++ +VDGCA+F++ +KF L+++ ++EF + + Sbjct: 161 PEQLPHRPWITLKERDQILPSVSFTVMCYNVLCDKYAT--RQLYGYCPSWALNWEYRKKGIMDEIISCDADIISLQEVETEQYFTLFMPALEERGYDGFFSPKSRAKIMSDQEKKHVDGCAIFFRTEKFSLVQKHTVEFNQIAM 302 HSP 2 Score: 31.187 bits (69), Expect = 4.783e-14 Identity = 19/77 (24.68%), Postives = 35/77 (45.45%), Query Frame = 2 Query: 698 LRQMRNTKSRRVLVGNIHVLYNPNRGEVKLGQICFLSSRAQIVAEKW-----------GNIPVVLAGDFNITLQSAI 895 ++ +++ + ++V N H+ ++P +VKL Q S + + EK +IP VL D N L S + Sbjct: 338 MKPHHSSEKQLLMVANAHMHWDPEYSDVKLIQTMMFVSELKSIIEKAACRPGSPTPDPNSIPFVLCADLNSLLDSGV 414
BLAST of FC878236 vs. ExPASy Swiss-Prot
Match: NOCT_HUMAN (Nocturnin OS=Homo sapiens GN=CCRN4L PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 7.206e-14 Identity = 57/197 (28.93%), Postives = 92/197 (46.70%), Query Frame = 1 Query: 283 PDVLRHWIDADPNPISSQERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRYFDILN-VMEKTGYAG---------CYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGLREN---VAQ-LSAFEADAQH-----KIKKSTGW*HTRSL*SKPRGSEIRSNLFSFLKG 816 P R ++D + S+ V+ +NIL + +D + E +KW RK LI +E++ PDI+C+QEVD YFD ++ + GY G C + DGCA+F+ ++F+L+ +I L+ N +AQ L E+ Q +K TGW RS +G ++ NL + +G Sbjct: 123 PRFQRDFVDLRTDCPSTHPPIRVMQWNILAQALG-EGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQEVDHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLKARTGWERFRS----AQGCDLLQNLQNITQG 314
BLAST of FC878236 vs. ExPASy Swiss-Prot
Match: CCR4_CANAL (Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Candida albicans GN=CCR4 PE=3 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 8.001e-14 Identity = 42/120 (35.00%), Postives = 64/120 (53.33%), Query Frame = 1 Query: 331 SQERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVD-RYFD--ILNVMEKTGYAGCYKRRT---------GDNVDGCAMFWKADKFRLLEQTSIEF 654 S + F+V+SYN L A +Y+ ++W+ RK L+ +E++ N DI+CMQEV+ + F L VM GY G + +T VDGCA F+K DKF L+ + + E+ Sbjct: 452 SSDNFTVLSYNTLCQHYATPK--MYKFTPSWALQWDYRKNLLEKEVLNYNTDIVCMQEVETKTFQEFWLPVMTANGYKGYFFSKTRSKTMSETDSKKVDGCATFFKNDKFSLIHKQNFEY 569 HSP 2 Score: 33.8834 bits (76), Expect = 8.001e-14 Identity = 22/81 (27.16%), Postives = 40/81 (49.38%), Query Frame = 2 Query: 686 NFPLLRQMRNTKS-RRVLVGNIHVLYNPNRGEVKLGQICFLSSRAQIVAEKWG---------NIPVVLAGDFNITLQSAIY 898 N L+ +++ +S ++ V N H+ ++P +VK Q+ L Q + +K+ N +V+ GDFN SA+Y Sbjct: 594 NIALISYLQHKESGEKIAVVNTHLHWDPAFNDVKALQVGILLEELQGIIKKYRHTNSNEDIKNSSIVVCGDFNSVKDSAVY 674
BLAST of FC878236 vs. ExPASy Swiss-Prot
Match: PDE12_BOVIN (2',5'-phosphodiesterase 12 OS=Bos taurus GN=PDE12 PE=1 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 8.051e-14 Identity = 44/129 (34.11%), Postives = 62/129 (48.06%), Query Frame = 1 Query: 352 VSYNILGDKNA---FKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRYF---DILNVMEKTGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGLRENVAQLSAFEADAQHK 720 VSYNIL D A F LY ++ + R+ LI +EL G N D+IC+QEVDR ++ +E G G ++ + +G A F++ KF LL Q I F E A ++D HK Sbjct: 298 VSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDRCVFTDSLMPALEAFGLEGVFRIK---QHEGLATFYRKSKFSLLSQHDIAFHE-----------ALQSDPLHK 412 HSP 2 Score: 39.6614 bits (91), Expect = 8.051e-14 Identity = 19/66 (28.79%), Postives = 35/66 (53.03%), Query Frame = 2 Query: 704 QMRNTKSRRVLVGNIHVLYNPNRGEVKLGQICF-LSSRAQIVAEKWGNIPVVLAGDFNITLQSAIY 898 Q S+++ V N H+ ++P G ++L Q+ L+ + + + IPV+ GDFN T + +Y Sbjct: 441 QSTKDSSKKICVANTHLYWHPKGGYIRLIQMAVALAHIRHVSCDLYPGIPVIFCGDFNSTPSTGMY 506
BLAST of FC878236 vs. ExPASy Swiss-Prot
Match: CCR4_EMENI (Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Emericella nidulans GN=ccr4 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.043e-13 Identity = 47/142 (33.10%), Postives = 66/142 (46.48%), Query Frame = 1 Query: 283 PDVLRHWIDADPNPISSQERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDR------------YFDILNVMEKTGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGLR 672 P R W+ D +S ++ SV+SYN L D +A + Y R + W R+ I EL +PDIIC+QE+D+ Y D V G A + VDGCA F+K KF LL++ I F + +R Sbjct: 289 PPPARDWLVLDETAATSPDKVSVLSYNTLCDSSATQSHYGYAPSRV--LSWEFRRETILNELRAHDPDIICLQEIDQGSYNEFFREQLAYSDYKGVFWPRGRAMGMQEEDAKGVDGCATFFKGSKFILLDKQVINFGQTAVR 428 HSP 2 Score: 25.409 bits (54), Expect = 1.043e-13 Identity = 16/47 (34.04%), Postives = 24/47 (51.06%), Query Frame = 2 Query: 710 RNTKSRRVLVGNIHVLYNPNRGEVKLGQICFLSSRAQIVAEKWGNIP 850 R T SR ++V N H+ ++P +VKL Q L +EK+ P Sbjct: 457 RQTGSRFIIV-NAHLYWDPAFKDVKLIQTAILMEEITKHSEKYAKWP 502
BLAST of FC878236 vs. ExPASy Swiss-Prot
Match: CCR4_ASPCL (Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Aspergillus clavatus GN=ccr4 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.760e-13 Identity = 49/148 (33.11%), Postives = 68/148 (45.95%), Query Frame = 1 Query: 265 PFDEPSPDVLRHWIDADPNPISSQERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDR------------YFDILNVMEKTGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGLR 672 P P PD R W+ D +S E+ +V+SYN L D +A + Y R + W R+ LI EL DI+C+QE+D+ Y D V G A + VDGCA F+K KF LL++ I F + +R Sbjct: 274 PVHLPPPD--RDWVVLDETASASTEKITVLSYNTLCDSSATQSHYGYAPARV--LSWEFRRELILSELRSHGSDIVCLQEIDQGSYNEYFREQLAYNDYKGVYWPRGRAMGMQEEDAKGVDGCATFFKGSKFILLDKQLINFGQTAVR 417 HSP 2 Score: 24.2534 bits (51), Expect = 1.760e-13 Identity = 15/47 (31.91%), Postives = 24/47 (51.06%), Query Frame = 2 Query: 710 RNTKSRRVLVGNIHVLYNPNRGEVKLGQICFLSSRAQIVAEKWGNIP 850 R T SR ++V N H+ ++P +VKL Q L ++E + P Sbjct: 446 RQTGSRFIVV-NAHLYWDPAFKDVKLIQTAILMEEITKLSETYAKWP 491
BLAST of FC878236 vs. ExPASy Swiss-Prot
Match: CCR4_ASPOR (Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Aspergillus oryzae GN=ccr4 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.622e-13 Identity = 50/150 (33.33%), Postives = 73/150 (48.67%), Query Frame = 1 Query: 265 PFDEPSPDVLRHWIDADPNPISSQERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDR-----YFDILNVMEKTGYAGCY---------KRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGLR 672 P + P PD R W+ D +S E+ +V+SYN L D +A + Y R + W R+ +I EL + DI+C+QEVD+ YF + GY G Y + +VDGCA F+K KF LL++ I F + +R Sbjct: 354 PENPPPPD--RDWVILDETAGTSTEKITVLSYNALCDSSATQSHFGYTPSRA--LSWEFRRDVILSELRSHDSDIVCLQEVDQGSYNGYFR--EQLAYNGYKGVYWPRGRAMGMQEEEAKSVDGCATFFKGTKFILLDKQMINFGQTAVR 497 HSP 2 Score: 23.0978 bits (48), Expect = 2.622e-13 Identity = 12/41 (29.27%), Postives = 20/41 (48.78%), Query Frame = 2 Query: 728 RVLVGNIHVLYNPNRGEVKLGQICFLSSRAQIVAEKWGNIP 850 R +V N H+ ++P +VKL Q L ++E + P Sbjct: 531 RFIVVNAHLYWDPAFKDVKLIQTAILMEEITKLSETYAKWP 571 HSP 3 Score: 21.9422 bits (45), Expect = 2.622e-13 Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 2 Query: 845 IPVVLAGDFNITLQSAIY 898 IP+ + GDFN + SA Y Sbjct: 607 IPLFMCGDFNSSPGSAAY 624
BLAST of FC878236 vs. ExPASy Swiss-Prot
Match: CCR4_ASPNC (Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=ccr4 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.450e-13 Identity = 51/151 (33.77%), Postives = 69/151 (45.70%), Query Frame = 1 Query: 265 PFDEPSPDVLRHWIDADPNPISSQ---ERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDR------------YFDILNVMEKTGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGLR 672 P P PD R WI D SS E+ +V+S+N L D +A Y R + W R+ LI EL + DIIC+QE+D+ Y D V G A + +VDGCA F+K KF LL++ I F + +R Sbjct: 274 PVHLPPPD--RDWIILDETASSSNSPTEKITVLSHNALCDSSATPSHFGYTPSRV--LSWEFRRELILSELRSHDSDIICLQEIDQGSYNGFFREQLAYNDYKGVYWPRGRAMGMQEEEAKSVDGCATFFKGSKFILLDKQMINFGQTAVR 420 HSP 2 Score: 27.335 bits (59), Expect = 8.450e-13 Identity = 21/81 (25.93%), Postives = 31/81 (38.27%), Query Frame = 2 Query: 728 RVLVGNIHVLYNPNRGEVKLGQICFLSSRAQIVAEKWG------------------------NIPVVLAGDFNITLQSAIY 898 R +V N H+ ++P +VKL Q L ++EK+ IP+ + GDFN SA Y Sbjct: 454 RFIVVNAHLYWDPAFKDVKLIQTAILMEEITKLSEKYAKFPPCTDKTAFRFSEAEVEYASGDQIPLFMCGDFNSAPGSAAY 534
BLAST of FC878236 vs. ExPASy Swiss-Prot
Match: CCR4_ENCCU (Probable glucose-repressible alcohol dehydrogenase transcriptional effector homolog OS=Encephalitozoon cuniculi GN=CCR4 PE=3 SV=1) HSP 1 Score: 53.5286 bits (127), Expect = 8.516e-13 Identity = 41/136 (30.15%), Postives = 64/136 (47.06%), Query Frame = 1 Query: 295 RHWIDADPNPISSQERFSVVSYNILGDKNAFKHRDLYQN---VRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRY--FDILN--VMEKTGYAGCYKRR-------TGDNVDGCAMFWKADKFRLLEQTSIEFKE 660 R WI+ + + SV ++NIL N + R Y + E+ R+ + QE++ N DI+C+QE++ Y FD + + Y R NVDGCA+FW+ KFRL+ Q I+F + Sbjct: 156 RLWIECTGKNVFYGDTVSVGTFNILS--NIYATRMTYAPSWVINSEF-----RREGVLQEIVLYNVDILCLQEIELYSFFDFYKEQLEMRCNYDSIIYPRGRVKSVPDKKNVDGCAIFWRRSKFRLIAQFPIDFHQ 284 HSP 2 Score: 41.2022 bits (95), Expect = 8.516e-13 Identity = 19/64 (29.69%), Postives = 36/64 (56.25%), Query Frame = 2 Query: 707 MRNTKSRRVLVGNIHVLYNPNRGEVKLGQICFLSSRAQIVAEKWGNIPVVLAGDFNITLQSAIY 898 + ++VLV N H+ ++P+ ++KL Q+ L + V+ + N ++L GDFN S++Y Sbjct: 314 LERPNGQQVLVMNTHIFWDPDYPDIKLLQVLLLVEEIKRVSSRHPNACLLLQGDFNSLRSSSVY 377 The following BLAST results are available for this feature:
BLAST of FC878236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878236 ID=FC878236; Name=FC878236; organism=Citrus clementina; type=EST; length=899bpback to top |