FC878238
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878238 vs. ExPASy Swiss-Prot
Match: NFYA_DICDI (Nuclear transcription factor Y subunit alpha OS=Dictyostelium discoideum GN=nfyA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.311e-17 Identity = 48/88 (54.55%), Postives = 57/88 (64.77%), Query Frame = 2 Query: 590 VYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFL----NTKQLNDNAANSAEKGMNSGADGSKGSTN 841 +YVNAKQY IL+RR +RAK E E K+ K RK Y HESRHQHA+RR RGCGGRFL K NAAN+A N A + +T+ Sbjct: 231 LYVNAKQYNRILKRRAARAKLESENKLPKTRKAYQHESRHQHAIRRQRGCGGRFLTKADQAKLDAQNAANAAAAAANPNASSTSTTTS 318
BLAST of FC878238 vs. ExPASy Swiss-Prot
Match: HAP2_SCHPO (Transcriptional activator hap2 OS=Schizosaccharomyces pombe GN=hap2 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.570e-15 Identity = 45/93 (48.39%), Postives = 61/93 (65.59%), Query Frame = 2 Query: 590 VYVNAKQYRGILRRRQSRAKAELEKKVIKA-RKPYLHESRHQHAMRRARGCGGRFLNTKQLND-NAANSAEKGMNSGADGSKGSTNGTGSVDS 862 +YVNAKQY IL+RR++RAK E + ++ +KPYLHESRH+HAMRR RG GGRFL +++ A +AE N G+ G N T + D+ Sbjct: 10 LYVNAKQYHRILKRREARAKLEERLRGVQTTKKPYLHESRHKHAMRRPRGPGGRFLTADKVSKLRAQEAAEAAANGGSTGD--DVNATNANDA 100
BLAST of FC878238 vs. ExPASy Swiss-Prot
Match: HAP2_YEAST (Transcriptional activator HAP2 OS=Saccharomyces cerevisiae GN=HAP2 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.663e-15 Identity = 42/78 (53.85%), Postives = 53/78 (67.95%), Query Frame = 2 Query: 593 YVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKQLNDNAANSAEKGMNSGADGS 826 YVNAKQY IL+RR +RAK E + ++ + RKPYLHESRH+HAMRR RG GGRFL ++ A S + G + D S Sbjct: 162 YVNAKQYYRILKRRYARAKLEEKLRISRERKPYLHESRHKHAMRRPRGEGGRFLTAAEI--KAMKSKKSGASDDPDDS 237
BLAST of FC878238 vs. ExPASy Swiss-Prot
Match: NFYA_RAT (Nuclear transcription factor Y subunit alpha OS=Rattus norvegicus GN=Nfya PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.357e-14 Identity = 38/59 (64.41%), Postives = 46/59 (77.97%), Query Frame = 2 Query: 590 VYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKQ 766 +YVNAKQY IL+RRQ+RAK E E K+ K R+ YLHESRH+HAM R RG GGRF + K+ Sbjct: 259 LYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARKRGEGGRFFSPKE 317
BLAST of FC878238 vs. ExPASy Swiss-Prot
Match: NFYA_MOUSE (Nuclear transcription factor Y subunit alpha OS=Mus musculus GN=Nfya PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.357e-14 Identity = 38/59 (64.41%), Postives = 46/59 (77.97%), Query Frame = 2 Query: 590 VYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKQ 766 +YVNAKQY IL+RRQ+RAK E E K+ K R+ YLHESRH+HAM R RG GGRF + K+ Sbjct: 264 LYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARKRGEGGRFFSPKE 322
BLAST of FC878238 vs. ExPASy Swiss-Prot
Match: NFYA_HUMAN (Nuclear transcription factor Y subunit alpha OS=Homo sapiens GN=NFYA PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.357e-14 Identity = 38/59 (64.41%), Postives = 46/59 (77.97%), Query Frame = 2 Query: 590 VYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKQ 766 +YVNAKQY IL+RRQ+RAK E E K+ K R+ YLHESRH+HAM R RG GGRF + K+ Sbjct: 265 LYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARKRGEGGRFFSPKE 323
BLAST of FC878238 vs. ExPASy Swiss-Prot
Match: NFYA_BOVIN (Nuclear transcription factor Y subunit alpha OS=Bos taurus GN=NFYA PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.357e-14 Identity = 38/59 (64.41%), Postives = 46/59 (77.97%), Query Frame = 2 Query: 590 VYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKQ 766 +YVNAKQY IL+RRQ+RAK E E K+ K R+ YLHESRH+HAM R RG GGRF + K+ Sbjct: 259 LYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARKRGEGGRFFSPKE 317
BLAST of FC878238 vs. ExPASy Swiss-Prot
Match: HAP2_KLULA (Transcriptional activator HAP2 OS=Kluyveromyces lactis GN=HAP2 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.022e-14 Identity = 37/59 (62.71%), Postives = 45/59 (76.27%), Query Frame = 2 Query: 593 YVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKQL 769 YVNAKQY IL+RR +RAK E K+ + R+PYLHESRH+HAMRR RG GGRFL ++ Sbjct: 188 YVNAKQYYRILKRRYARAKLEENLKISRERRPYLHESRHKHAMRRPRGQGGRFLTAAEM 246 The following BLAST results are available for this feature:
BLAST of FC878238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878238 ID=FC878238; Name=FC878238; organism=Citrus clementina; type=EST; length=863bpback to top |