FC878247

Overview
NameFC878247
Unique NameFC878247
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length838
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC878247 vs. ExPASy Swiss-Prot
Match: ZFAN5_HUMAN (AN1-type zinc finger protein 5 OS=Homo sapiens GN=ZFAND5 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.352e-11
Identity = 25/40 (62.50%), Postives = 33/40 (82.50%), Query Frame = 2 
Query:  593 NRCITCRRRVGLTGFKCRCGSVFCGTHRYPEQHACSFDFK 712
            NRC  CR++VGLTGF CRCG++FCG HRY ++H C +D+K
Sbjct:  152 NRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYK 191
The following BLAST results are available for this feature:
BLAST of FC878247 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
ZFAN5_HUMAN1.352e-1162.50AN1-type zinc finger protein 5 OS=Homo sapiens GN=... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA96BB01RM1 IVIA1 Citrus clementina cDNA clone IC0AAA96BB01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878247 ID=FC878247; Name=FC878247; organism=Citrus clementina; type=EST; length=838bp
AGAAGGTGTTGGGAATCTGCAGTCAGGGCCGGGAATCCTCCCCTCAAAAG
GAAAAGAAGAGTTTCTTTTTCCGCGGAGCTGCCTTCCTTCATAAAAAGAG
AAACCCTGCTTTCCTTTCTTTGCCAAAACTCCTTTGCCTTCCTTTCTTTC
TTTCTTTCTTTCCAAAATCCCAATTGCCAAACAGAAGATAAAGACTAATG
CTCCTTATATATTTCCTTTCCAGTCGTCCCTCTTTTGAAAAATCAATCAA
TTTCAGCAAATTATTCCTGAAAATATTGTTTACAGGTTGAAGATGGCGGA
AGAGCACAGATGTCAAGCACCCCGTTTGTGCGTGAACAACTGCGGATTTT
TCGGGAGCCCAACAACTCAAAATCTCTGCTCCAAATGTTTTCGCGATCTT
CAGTTGAAAGCACAACAATCTTCCTCGGCCAAACACGCCCTTAACCAAAC
CCTGATTTCTTCGTCGTCGTCGTCGCCGTCGCCGTCGGTTGATTTGTCTC
TGCGCGAGAGACCGGCGACGGATGTGGAGGTAGCGGCAGAGGCGGAGAAG
CCGCCGGCTGAGGTGGCCGCTCCGGTGCAGTCGACGGCGGCGAACAGGTG
CATAACTTGCAGGAGGCGCGTGGGGCTCACGGGGTTCAAGTGCAGGTGCG
GGTCGGTGTTCTGCGGGACCCACAGGTACCCGGAGCAGCACGCGTGCTCG
TTCGATTTCAAAGAGATGGGCAAAGAGCTGATTGCAGACAAACCCAAGAC
ACAAGAATGGGCAATGAAAGATAGGGATGCTGAGGCAGAGCCATTAAACC
TTTAATTGGTGGACTGAGGACACAAACCACCGGTGATT
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