FC878285
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878285 vs. ExPASy Swiss-Prot
Match: DHAS_CORFL (Aspartate-semialdehyde dehydrogenase OS=Corynebacterium flavum GN=asd PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 7.016e-27 Identity = 65/169 (38.46%), Postives = 100/169 (59.17%), Query Frame = 2 Query: 266 QEFLSVLSDRDFPYRSIKMLASKRSAGKQLSFQDKAYTVEELT---EDSFDGVDIALFSAGGSISKKFGPIAVEKGSIVVDNSSAFRMVENVPLVIPEVNPEAMSGIKVGMGKGALIANPNCSTIICLMAATPLHRRAKVTRMVVSTYQXXXXXXXXXMEELELQTREV 763 Q ++L +R+FP +++ AS RSAG+++ F+ VE++T E+S G+D+ALFSAGG+ SK++ P+ G+ VVDNSSA+R + VPL++ EVNP + G +IANPNC+T+ + PLH A + ++ VS+YQ +E L Q V Sbjct: 15 QVMRTLLEERNFPADTVRFFASPRSAGRKIEFRGTEIEVEDITQATEESLKGIDVALFSAGGTASKQYAPLFAAAGATVVDNSSAWRKDDEVPLIVSEVNPSDKDSLVKG-----IIANPNCTTMAAMPVLKPLHDAAGLVKLHVSSYQAVSGSGLAGVETLAKQVAAV 178
BLAST of FC878285 vs. ExPASy Swiss-Prot
Match: DHAS_CORML (Aspartate-semialdehyde dehydrogenase OS=Corynebacterium melassecola GN=asd PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.548e-26 Identity = 64/169 (37.87%), Postives = 99/169 (58.58%), Query Frame = 2 Query: 266 QEFLSVLSDRDFPYRSIKMLASKRSAGKQLSFQDKAYTVEELT---EDSFDGVDIALFSAGGSISKKFGPIAVEKGSIVVDNSSAFRMVENVPLVIPEVNPEAMSGIKVGMGKGALIANPNCSTIICLMAATPLHRRAKVTRMVVSTYQXXXXXXXXXMEELELQTREV 763 Q ++L +R+FP +++ AS RSAG+++ F+ VE++T E+S +D+ALFSAGG+ SK++ P+ G+ VVDNSSA+R + VPL++ EVNP + G +IANPNC+T+ + PLH A + ++ VS+YQ +E L Q V Sbjct: 15 QVMRTLLEERNFPADTVRFFASPRSAGRKIEFRGTEIEVEDITQATEESLKDIDVALFSAGGTASKQYAPLFAAAGATVVDNSSAWRKDDEVPLIVSEVNPSDKDSLVKG-----IIANPNCTTMAAMPVLKPLHDAAGLVKLHVSSYQAVSGSGLAGVETLAKQVAAV 178
BLAST of FC878285 vs. ExPASy Swiss-Prot
Match: DHAS_CORGL (Aspartate-semialdehyde dehydrogenase OS=Corynebacterium glutamicum GN=asd PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.548e-26 Identity = 64/169 (37.87%), Postives = 99/169 (58.58%), Query Frame = 2 Query: 266 QEFLSVLSDRDFPYRSIKMLASKRSAGKQLSFQDKAYTVEELT---EDSFDGVDIALFSAGGSISKKFGPIAVEKGSIVVDNSSAFRMVENVPLVIPEVNPEAMSGIKVGMGKGALIANPNCSTIICLMAATPLHRRAKVTRMVVSTYQXXXXXXXXXMEELELQTREV 763 Q ++L +R+FP +++ AS RSAG+++ F+ VE++T E+S +D+ALFSAGG+ SK++ P+ G+ VVDNSSA+R + VPL++ EVNP + G +IANPNC+T+ + PLH A + ++ VS+YQ +E L Q V Sbjct: 15 QVMRTLLEERNFPADTVRFFASPRSAGRKIEFRGTEIEVEDITQATEESLKDIDVALFSAGGTASKQYAPLFAAAGATVVDNSSAWRKDDEVPLIVSEVNPSDKDSLVKG-----IIANPNCTTMAAMPVLKPLHDAAGLVKLHVSSYQAVSGSGLAGVETLAKQVAAV 178
BLAST of FC878285 vs. ExPASy Swiss-Prot
Match: DHAS_MYCTU (Aspartate-semialdehyde dehydrogenase OS=Mycobacterium tuberculosis GN=asd PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.483e-24 Identity = 67/169 (39.64%), Postives = 98/169 (57.99%), Query Frame = 2 Query: 266 QEFLSVLSDRDFPYRSIKMLASKRSAGKQLSFQDKAYTVEELTEDSFDGVDIALFSAGGSISKKFGPIAVEKGSIVVDNSSAFRMVENVPLVIPEVNPEAMSGIKVGMGKGALIANPNCSTIICLMAATPLHRRAKVTRMVVSTYQXXXXXXXXXMEELELQTREVLEG 772 Q ++L +RDFP +++ AS RS G++L+F+ + VE+ G+DIALFSAG ++SK P G V+DNSSA+R +VPLV+ EVN E + + KG +IANPNC+T+ + LH A++ R+VVS+YQ + EL Q R V+ G Sbjct: 16 QVMRTLLDERDFPASAVRFFASARSQGRKLAFRGQEIEVEDAETADPSGLDIALFSAGSAMSKVQAPRFAAAGVTVIDNSSAWRKDPDVPLVVSEVNFERDAHRR---PKG-IIANPNCTTMAAMPVLKVLHDEARLVRLVVSSYQAVSGSGLAGVAELAEQARAVIGG 180
BLAST of FC878285 vs. ExPASy Swiss-Prot
Match: DHAS_MYCBO (Aspartate-semialdehyde dehydrogenase OS=Mycobacterium bovis GN=asd PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.483e-24 Identity = 67/169 (39.64%), Postives = 98/169 (57.99%), Query Frame = 2 Query: 266 QEFLSVLSDRDFPYRSIKMLASKRSAGKQLSFQDKAYTVEELTEDSFDGVDIALFSAGGSISKKFGPIAVEKGSIVVDNSSAFRMVENVPLVIPEVNPEAMSGIKVGMGKGALIANPNCSTIICLMAATPLHRRAKVTRMVVSTYQXXXXXXXXXMEELELQTREVLEG 772 Q ++L +RDFP +++ AS RS G++L+F+ + VE+ G+DIALFSAG ++SK P G V+DNSSA+R +VPLV+ EVN E + + KG +IANPNC+T+ + LH A++ R+VVS+YQ + EL Q R V+ G Sbjct: 16 QVMRTLLDERDFPASAVRFFASARSQGRKLAFRGQEIEVEDAETADPSGLDIALFSAGSAMSKVQAPRFAAAGVTVIDNSSAWRKDPDVPLVVSEVNFERDAHRR---PKG-IIANPNCTTMAAMPVLKVLHDEARLVRLVVSSYQAVSGSGLAGVAELAEQARAVIGG 180
BLAST of FC878285 vs. ExPASy Swiss-Prot
Match: USG_AZOVI (USG-1 protein homolog OS=Azotobacter vinelandii GN=usg PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.583e-17 Identity = 52/182 (28.57%), Postives = 91/182 (50.00%), Query Frame = 2 Query: 275 LSVLSDRDFPYRSIKMLASKRSAGKQLSFQDKAYTVEELTEDSFDGVDIALFSAGGSISKKFGPIAVEKGSIVVDNSSAFRMVENVPLVIPEVNPEAMSGIKVGMGKGALIANPNCSTIICLMAATPLHRRAKVTRMVVSTYQXXXXXXXXXMEELELQTREVLEGKPPTCKIFSQQYAFNL 820 + +L +RDFP + +LAS SAGK +SF+ + V+ + F V + F+AG ++++++ A G ++VD S A + + P V+ EVNP+ + ++ + +P + +A PL + + V+ + EL QT E+L G+PP + F +Q AFNL Sbjct: 21 VEILEERDFPVGQLHLLASPASAGKSVSFKGRNLRVKSIEAFDFAQVRLVFFAAGQAVTRQYASQARAAGCMLVDLSGALPL-QQAPRVVAEVNPQVLEKLEA----PCQVTSPASQVVALALALAPLRPLVRWRHLGVTACLPVSSLGREGVAELARQTTELLNGRPPKPRFFDRQIAFNL 197
BLAST of FC878285 vs. ExPASy Swiss-Prot
Match: DHAS_METJA (Aspartate-semialdehyde dehydrogenase OS=Methanocaldococcus jannaschii GN=asd PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.572e-16 Identity = 53/164 (32.32%), Postives = 90/164 (54.88%), Query Frame = 2 Query: 266 QEFLSVLSDRDFPYRSIKMLASKRSAGKQLS-----FQDKAY--TVEELT-------EDSFDGVDIALFSAGGSISKKFGPIAVEKGSIVVDNSSAFRMVENVPLVIPEVNPEAMSGIKVGMGK----GALIANPNCSTIICLMAATPLHRRAKVTRMVVSTYQ 703 Q F+ +L+D + + AS+RSAGK+ FQD+ ++++ + F+ VDI + ++KKF P ++G ++ N+SA+RM E+VPLVIPEVN + + I++ K GA+I NPNCSTI ++ P+ + + + ++T Q Sbjct: 22 QRFVQLLADHPM-FELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFEDVDIVFSALPSDLAKKFEPEFAKEGKLIFSNASAYRMEEDVPLVIPEVNADHLELIEIQREKRGWDGAIITNPNCSTICAVITLKPIMDKFGLEAVFIATMQ 184
BLAST of FC878285 vs. ExPASy Swiss-Prot
Match: USG_ECOLI (USG-1 protein OS=Escherichia coli (strain K12) GN=usg PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.766e-15 Identity = 57/186 (30.65%), Postives = 91/186 (48.92%), Query Frame = 2 Query: 266 QEFLSVLSDRDFPYRSIKMLASKRSAGKQLSFQDKAYTVEELTEDSFDGVDIALFSAGGSISKKFGPIAVEKGSIVVDNSSAFRMVENVPLVIPEVNPEAMSGIKVGMGKGALIANPNCSTIICLMAATPLHRRAKVTRMVVSTYQXXXXXXXXXMEELELQTREVLEGKP-PTCKIFSQQYAFNL 820 + L L++R FP I LA SAG+QL F K TV++ E + +A F AG + + A G +V+D+S F + +VPLV+PEVNP ++ + +IA P+ T L A PL + ++R+ V++ ++ L Q+ ++L G P F +Q AFN+ Sbjct: 18 EALLETLAERQFPVGEIYALARNESAGEQLRFGGKTITVQDAAEFDWTQAQLAFFVAGKEATAAWVEEATNSGCLVIDSSGLFALEPDVPLVVPEVNPFVLTDYR----NRNVIAVPDSLTSQLLAALKPLIDQGGLSRISVTSLISASAQGKKAVDALAGQSAKLLNGIPIDEEDFFGRQLAFNM 199
BLAST of FC878285 vs. ExPASy Swiss-Prot
Match: DHAS_METTH (Aspartate-semialdehyde dehydrogenase OS=Methanobacterium thermoautotrophicum GN=asd PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.531e-13 Identity = 56/162 (34.57%), Postives = 78/162 (48.15%), Query Frame = 2 Query: 266 QEFLSVLSDRDFPYRSIKMLASKRSAGKQLSFQDKAYTVEELTEDSFD------------GVDIALFSAGGSISKKFGPIAVEKGSIVVDNSSAFRMVENVPLVIPEVNPEAMSGIKVGMGK----GALIANPNCSTIICLMAATPLHRRAKVTRMVVSTYQ 703 Q F+ +L D+ + + AS RSAGK Y E+ E D VDI + +++K P EK IV N+SA RM +VPLVIPEVNPE + I+V + G ++ NPNCSTI + P++ + R+ VST Q Sbjct: 15 QRFIQML-DKHPEFELTTLAASSRSAGKPYGEVANWYLDCEMPESVRDMEVVETDPSAVGDVDILFSALPADVARKVEPKFAEK-YIVASNASAMRMEPDVPLVIPEVNPEFLDLIEVQQRRRGWDGFIVTNPNCSTIALTLTLKPIYDAYTIKRVYVSTMQ 174
BLAST of FC878285 vs. ExPASy Swiss-Prot
Match: DHAS_ARCFU (Aspartate-semialdehyde dehydrogenase OS=Archaeoglobus fulgidus GN=asd PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.191e-12 Identity = 47/146 (32.19%), Postives = 78/146 (53.42%), Query Frame = 2 Query: 266 QEFLSVLSDRDFPYRSIKMLASKRSAGKQLSFQ----------DKAYTVEELTED-SFDGVDIALFSAGGSISKKFGPIAVEKGSIVVDNSSAFRMVENVPLVIPEVNPEAMSGIKVGMGK----GALIANPNCSTIICLMAATPL 658 Q+F+ +L++ + ++ + AS+R GK+ + D A +E + D DI + I+++ P E G +V N+SA+RM E+VPLVIPEVNPE + I+V G ++ NPNC+TI+ +++ PL Sbjct: 16 QKFIQMLAEHPW-FKLTSLAASERRVGKKYGEEVDWIVSREVPDIAKDIEMVPMDPKHVDADIVFSALPSDIAREVEPKFAEAGFVVASNASAYRMAEDVPLVIPEVNPEHLGLIEVQKKNRGWDGFIVTNPNCTTIVLVLSLKPL 160 The following BLAST results are available for this feature:
BLAST of FC878285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878285 ID=FC878285; Name=FC878285; organism=Citrus clementina; type=EST; length=870bpback to top |