FC878287
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878287 vs. ExPASy Swiss-Prot
Match: MTNA_CALS8 (Methylthioribose-1-phosphate isomerase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=mtnA PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.479e-46 Identity = 112/279 (40.14%), Postives = 154/279 (55.20%), Query Frame = 1 Query: 91 YRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXV---EVFNLNAFSGTAADAASFLGNKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSI 918 + L +LDQRKLP E Y D + AI++M++RG + E+ N S + L YL +SRPTAVNL A ++K++ +A + + ++ ++ A+ + +D + NK IG +G N L ++LTHCN G+LAT GYGTALGVIR G Y ETRP+ QG+RLTAFEL D IP LMK G++ VIVGADR+A NGDT NKIGTYSL++ AK H I FY++AP+++I Sbjct: 6 FENDKLIVLDQRKLPFEKEYFVCSTYQDVYIAIKDMIIRGAPLIGIVAAYGVVLGFKEIIEKNMDSAKIYEI-------LNYLANSRPTAVNLFWALERMKKVFEEARNLSK--SQIYSLLMQEAKKIEDEDKSINKKIGEHG-----NTLIKEGANILTHCNAGALATGGYGTALGVIREAFFAGKNIHVYVDETRPYLQGARLTAFELSEDGIPNTVICDNMAGYLMKLGKIDCVIVGADRIALNGDTANKIGTYSLSVLAKHHGIPFYISAPISTI 270
BLAST of FC878287 vs. ExPASy Swiss-Prot
Match: MTNA_THEEB (Methylthioribose-1-phosphate isomerase OS=Thermosynechococcus elongatus (strain BP-1) GN=mtnA PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.932e-46 Identity = 120/292 (41.10%), Postives = 162/292 (55.48%), Query Frame = 1 Query: 52 SVSTDNNSLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFL---GNKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSI 918 +V+ + ++ + + +QL+DQ +LP + EI +A+ +AIR M+VRG L A +D FL N L +RPTAVNL A +L + T E Q +E A+ + ++DV T +AIG G L + K +LTHCN G+LATAGYGTALGV+RA + G LER Y ETRP QG++LTA+E V + IP M+ G + AV+VGADR+A NGDT NKIGTYS+AL AK HNI F+VAAPL++I Sbjct: 2 AVTANVGTIFPVVWAGDRVQLIDQTRLPEQYELREITTAAEMATAIRTMIVRGAPAIGVAAAFGMV-----LGAREYRGSDREGFLIHLENIASQLRQTRPTAVNLFWAIDRLLAAAQQPTPTLEELQ---QHLLETAQTIAREDVQTCQAIGKNGLGVLPKTPE--KLRLLTHCNAGALATAGYGTALGVVRAAWAAGRLERLYADETRPRLQGAKLTAWECVQEGIPVTLIADTMAAHCMQRGMIDAVVVGADRIALNGDTANKIGTYSVALAAKAHNIPFFVAAPLSTI 283
BLAST of FC878287 vs. ExPASy Swiss-Prot
Match: MTNA_DESHD (Methylthioribose-1-phosphate isomerase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=mtnA PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.932e-46 Identity = 113/272 (41.54%), Postives = 151/272 (55.51%), Query Frame = 1 Query: 103 SLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGNKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSI 918 SL++LDQ +LP+E Y + AI +M VRG + +SG AD + + L +RPTAVNL A ++++ + + A E + QA + AE + +DD N+ IG +G N + ++ ++LTHCN G+LAT YGTALGVIRA G Y ETRPF QG+RLTA EL++D IP LM+ G + VIVGADR+AANGDT NKIGTYSLA+ A H I FYVAAP ++I Sbjct: 10 SLKILDQTRLPVEIKYRMAATYEEVAEAIEKMEVRGAPAIGAAAAYGYALGAIG---YSGELADLPAHMEKVQHRLAETRPTAVNLFWALRRMEDRL-RDQHEAKELAEIRQALVAEAENIAEDDRRVNRLIGEHG-----NAIVTAEANILTHCNAGALATVEYGTALGVIRAAQQAGKKVHVYAGETRPFLQGARLTALELMNDHIPVTLIADNMAGFLMQQGNIDLVIVGADRIAANGDTANKIGTYSLAVLAHAHGIPFYVAAPTSTI 272
BLAST of FC878287 vs. ExPASy Swiss-Prot
Match: MTNA_XYLFA (Methylthioribose-1-phosphate isomerase OS=Xylella fastidiosa GN=mtnA PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 3.296e-46 Identity = 113/271 (41.70%), Postives = 152/271 (56.09%), Query Frame = 1 Query: 106 LQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGNKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSI 918 L+LLDQRKLP Y+E S D AIR ++VRG + + A G +A L L+ L ++RPTAVNL+ A+++ +S A A QA AE + ++D+ N+ +G+YGA+ + VLTHCNTGSLATAG+GTALGVIRA ++G + R + ETRP+ QG+RLT +EL D I LMK G+V VIVGADR+ ANGD NKIGTY LA+ A+ H + F V A ++ Sbjct: 25 LKLLDQRKLPFVVEYVECHSSEDVTQAIRALIVRGAPAIGIVAGWGAVLAAREIEAVDGI--EALRKLEPALQRLHAARPTAVNLAWVLARMRRTLSAAHADWR------QAMAREAESIAREDLTANRCMGAYGAALIP-----IGSGVLTHCNTGSLATAGFGTALGVIRAGIAQGRIARVFAGETRPWLQGARLTVWELQQDGIDVTLIADSAAAHLMKSGQVQWVIVGADRICANGDAANKIGTYQLAITARHHGVKFMVVASAATV 282
BLAST of FC878287 vs. ExPASy Swiss-Prot
Match: MTNA_THEPX (Methylthioribose-1-phosphate isomerase OS=Thermoanaerobacter sp. (strain X514) GN=mtnA PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 3.296e-46 Identity = 115/292 (39.38%), Postives = 158/292 (54.11%), Query Frame = 1 Query: 76 LQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGNK-----------LEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSI 918 ++SI ++ L L+DQRKLP E + D AI+EMVVRG A G A FL LE + +SRPTAVNL A ++K++I K E ++QA + A+ + +D+ TNK + +G N++ +LTHCNTG+LAT GYGTALGVIR H G Y ETRP QGS+LTA+ELV + IP L++DG++ ++VGADR+A NGDT NKIGT+ L++ AK +N+ FYV AP ++I Sbjct: 4 IKSIEFKNEVLYLIDQRKLPNSYEIFECKTYRDVNFAIKEMVVRG-------------APAIGAAAAYGVVLAAKEFLKEDREIFFEKIEEALEVIANSRPTAVNLMWAVKRMKKVIEKNKEL--ELIDIYQALKKEADSIYLEDIETNKKMAKFG-----NEVIKENAVILTHCNTGALATVGYGTALGVIREAHYSGKNIFVYADETRPRLQGSKLTAWELVQEGIPAKLIADSVAATLIRDGKIDVILVGADRIALNGDTANKIGTFMLSVIAKVYNVPFYVVAPTSTI 275
BLAST of FC878287 vs. ExPASy Swiss-Prot
Match: MTNA_THEP3 (Methylthioribose-1-phosphate isomerase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=mtnA PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 3.296e-46 Identity = 115/292 (39.38%), Postives = 158/292 (54.11%), Query Frame = 1 Query: 76 LQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGNK-----------LEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSI 918 ++SI ++ L L+DQRKLP E + D AI+EMVVRG A G A FL LE + +SRPTAVNL A ++K++I K E ++QA + A+ + +D+ TNK + +G N++ +LTHCNTG+LAT GYGTALGVIR H G Y ETRP QGS+LTA+ELV + IP L++DG++ ++VGADR+A NGDT NKIGT+ L++ AK +N+ FYV AP ++I Sbjct: 4 IKSIEFKNEVLYLIDQRKLPNSYEIFECKTYRDVNFAIKEMVVRG-------------APAIGAAAAYGVVLAAKEFLKEDREIFFEKIEEALEVIANSRPTAVNLMWAVKRMKKVIEKNKEL--ELIDIYQALKKEADSIYLEDIETNKKMAKFG-----NEVIKENAVILTHCNTGALATVGYGTALGVIREAHYSGKNIFVYADETRPRLQGSKLTAWELVQEGIPAKLIADSVAATLIRDGKIDVILVGADRIALNGDTANKIGTFMLSVIAKVYNVPFYVVAPTSTI 275
BLAST of FC878287 vs. ExPASy Swiss-Prot
Match: MTNA_XYLFM (Methylthioribose-1-phosphate isomerase OS=Xylella fastidiosa (strain M12) GN=mtnA PE=3 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 4.304e-46 Identity = 112/271 (41.33%), Postives = 152/271 (56.09%), Query Frame = 1 Query: 106 LQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGNKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSI 918 L+LLDQRKLP Y+E S D AIR ++VRG + + A G +A L L+ L ++RPTAVNL+ A+++ +S A A + AE + ++D+ N+ +G+YGA+ + VLTHCNTGSLATAG+GTALGVIRA ++G + R + ETRP+ QG+RLT +EL D I LMK G+V VIVGADR+ ANGDT NKIGTY LA+ A+ H + F V A ++ Sbjct: 25 LKLLDQRKLPFVVEYVECHSSEDVTQAIRTLIVRGAPAIGIVAGWGAVLAAREIEAVDGI--EALRKLEPALQRLHAARPTAVNLAWVLARMRRTLSAAHADWRQVMEC------EAESIAREDITANRCMGAYGAALIP-----IGSGVLTHCNTGSLATAGFGTALGVIRAGIAQGRIARVFAGETRPWLQGARLTVWELQQDGIDATLIADSAAAHLMKSGQVQWVIVGADRICANGDTANKIGTYQLAITARHHGVKFMVVASAATV 282
BLAST of FC878287 vs. ExPASy Swiss-Prot
Match: MTNA_PSEAE (Methylthioribose-1-phosphate isomerase OS=Pseudomonas aeruginosa GN=mtnA PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 5.621e-46 Identity = 116/282 (41.13%), Postives = 159/282 (56.38%), Query Frame = 1 Query: 76 LQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGNKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKD-DVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSI 918 +++I +R G+L+LLDQR LP E ++LE +A+ AIR+MVVRG V A D + L L SRPTAVNL A ++++ + + E + A +EA I + + D N + G ++ Q + S ++LTHCNTG+LAT G+GTALGVIRA H EG++ R Y ETRP+ QGSRLTA+EL ++ IP LMK ++ VIVGADR+ ANGD NKIGTY LA+ A H + F V AP ++I Sbjct: 11 VKAIEWRDGTLRLLDQRLLPQEEVWLEHESAAEVAKAIRDMVVRGAPAIGISAAYGI---VLGARARLAQGGDWRAALEEDFRLLADSRPTAVNLFWALNRMRDRLERM----KEGDQPL-AVLEAEAISIHESDREANLTMAQLGMELIRKQ-QGSPQNILTHCNTGALATGGFGTALGVIRAAHLEGLVNRIYADETRPWLQGSRLTAWELANEGIPVSLNVDSAAAHLMKTENITWVIVGADRITANGDVANKIGTYQLAVNAMHHGVRFMVVAPSSTI 283
BLAST of FC878287 vs. ExPASy Swiss-Prot
Match: MTNA_PSEAB (Methylthioribose-1-phosphate isomerase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=mtnA PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 5.621e-46 Identity = 116/282 (41.13%), Postives = 159/282 (56.38%), Query Frame = 1 Query: 76 LQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGNKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKD-DVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSI 918 +++I +R G+L+LLDQR LP E ++LE +A+ AIR+MVVRG V A D + L L SRPTAVNL A ++++ + + E + A +EA I + + D N + G ++ Q + S ++LTHCNTG+LAT G+GTALGVIRA H EG++ R Y ETRP+ QGSRLTA+EL ++ IP LMK ++ VIVGADR+ ANGD NKIGTY LA+ A H + F V AP ++I Sbjct: 11 VKAIEWRDGTLRLLDQRLLPQEEVWLEHESAAEVAKAIRDMVVRGAPAIGISAAYGI---VLGARARLAQGGDWRAALEEDFRLLADSRPTAVNLFWALNRMRDRLERM----KEGDQPL-AVLEAEAISIHESDREANLTMAQLGMELIRKQ-QGSPQNILTHCNTGALATGGFGTALGVIRAAHLEGLVNRIYADETRPWLQGSRLTAWELANEGIPVSLNVDSAAAHLMKTENITWVIVGADRITANGDVANKIGTYQLAVNAMHHGVRFMVVAPSSTI 283
BLAST of FC878287 vs. ExPASy Swiss-Prot
Match: MTNA_PSEA8 (Methylthioribose-1-phosphate isomerase OS=Pseudomonas aeruginosa (strain LESB58) GN=mtnA PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 5.621e-46 Identity = 116/282 (41.13%), Postives = 159/282 (56.38%), Query Frame = 1 Query: 76 LQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGNKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKD-DVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSI 918 +++I +R G+L+LLDQR LP E ++LE +A+ AIR+MVVRG V A D + L L SRPTAVNL A ++++ + + E + A +EA I + + D N + G ++ Q + S ++LTHCNTG+LAT G+GTALGVIRA H EG++ R Y ETRP+ QGSRLTA+EL ++ IP LMK ++ VIVGADR+ ANGD NKIGTY LA+ A H + F V AP ++I Sbjct: 11 VKAIEWRDGTLRLLDQRLLPQEEVWLEHESAAEVAKAIRDMVVRGAPAIGISAAYGI---VLGARARLAQGGDWRAALEEDFRLLADSRPTAVNLFWALNRMRDRLERM----KEGDQPL-AVLEAEAISIHESDREANLTMAQLGMELIRKQ-QGSPQNILTHCNTGALATGGFGTALGVIRAAHLEGLVNRIYADETRPWLQGSRLTAWELANEGIPVSLNVDSAAAHLMKTENITWVIVGADRITANGDVANKIGTYQLAVNAMHHGVRFMVVAPSSTI 283 The following BLAST results are available for this feature:
BLAST of FC878287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 213
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878287 ID=FC878287; Name=FC878287; organism=Citrus clementina; type=EST; length=920bpback to top |