FC878289

Overview
NameFC878289
Unique NameFC878289
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length928
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878289 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.896e-33
Identity = 87/255 (34.12%), Postives = 134/255 (52.55%), Query Frame = 3
Query:  192 AETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREY---AGKKLFDPIRWGTSFNVNVDKTLFWRDYLKIHVHP-----QFNAPQNPLGFSKTIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDG--KWILVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNG 926
            ++ +P+I    +      +R +    +  AC  WG F+VI+HGV   L  +M R +  FF L  E K  Y    GKK      +  S ++  +    WR+ +    +P         P+ P G+   ++ Y +R+  L+  L+  + E++GLE   + KA     D  Q +VVN YP CPQP++ +GL  H+D G +T+L+Q+   GL    DG   WI V P  G+FVVN+GDH   +SNG++K+  H+AVVNG
Sbjct:   40 SDAVPLISLHGIDGA---RRAQIRDRVAAACEDWGIFQVIDHGVDADLIADMTRLAREFFALPAEDKLRYDMSGGKKG----GFIVSSHLQGEAVQDWREIVTYFSYPVKARDYGRWPEKPAGWCAVVERYSERLMGLSCNLMGVLSEAMGLETEALAKAC---VDMDQKVVVNFYPRCPQPDLTLGLKRHTDPGTITLLLQDLVGGLQATRDGGKNWITVQPISGAFVVNLGDHGHFMSNGRFKNADHQAVVNG 284          
BLAST of FC878289 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.896e-33
Identity = 82/243 (33.74%), Postives = 140/243 (57.61%), Query Frame = 3
Query:  195 ETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQK-REYAGKKLFDPIRWGTSFNVNVDKTLFWRDYLKIHVHPQFNAPQNPLGFSKTIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHV-GLHVRHDGKWILVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAV 917
            E  PII+   L      +R  T++ I +AC  WGFFE++NHG+P+ + D + + ++  +    EQ+ +E    K  + ++   + +++ + T F R    + V      P     + + ++++ KR+ +LA ELL  + E+LGLE+ Y++KA       +    V+ YPPCP+P+++ GL  H+D G + +L Q+D V GL +  D +WI V P   S V+N+GD +E+++NGKYKSV HR +
Sbjct:    2 ENFPIINLENLCGA---ERDATMEMIKDACENWGFFELVNHGIPHEVMDTVEKFTKGHYKKCMEQRFKELVASKGLEAVQAEVT-DLDWESTFFLRH---LPVSNISEVPDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVPHRVI 237          
BLAST of FC878289 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 4.223e-33
Identity = 88/251 (35.06%), Postives = 126/251 (50.20%), Query Frame = 3
Query:  189 EAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVP----NTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRWGTSFNVNVDKTLFWRDYLKIHVHPQFNAPQNP--LGFSKTIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWILVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVN 923
            E   +P+ID S L  G+ E+R K  +AI  A  +WGFF+VINHG+       +R E IR     FD   + ++  AG       RWGT    ++ + L W +   +   P  +   N      S T++++      LA  L + + E  G   S+ ++     T     L +N YPPCP+P  V GL PH+D   LTIL Q+   GL +  D +WI V P P + ++NIGD  +  SNG YKSV HR + N
Sbjct:   38 EEVELPVIDVSRLIDGAEEEREKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKKSKSEKFSAGS-----YRWGTPSATSI-RQLSWSEAFHV---PMTDISDNKDFTTLSSTMEKFASESEALAYMLAEVLAEKSGQNSSFFKENCVRNTC---YLRMNRYPPCPKPSEVYGLMPHTDSDFLTILYQDQVGGLQLIKDNRWIAVKPNPKALIINIGDLFQAWSNGMYKSVEHRVMTN 276          
BLAST of FC878289 vs. ExPASy Swiss-Prot
Match: FLS_EUSGR (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.223e-33
Identity = 84/248 (33.87%), Postives = 131/248 (52.82%), Query Frame = 3
Query:  201 IPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIR-WGTSFNVNVDKTLFWRDYLKIHVHP------QFNAPQNPLGFSKTIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWILVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVN 923
            +P+ID S           K +  +  A  +WG F+V+NHG+PN +  ++    + FF+L  E+K   A  +    I  +GT     VD    W D+L   + P      QF  P+NP  + +  +EY KR++ + + L K +   L LE +  +     + D   L+ +N YPPCP+P++ +G+  H+D   +T+L+ N+  GL V  DG W      P + +V+IGD +EI+SNGKYKSV HR  VN
Sbjct:   43 VPVIDLS------DSDEKKIVGLVSEASKEWGIFQVVNHGIPNEVIRKLQEVGKHFFELPQEEKELIAKPEGSQSIEGYGTRLQKEVDGKKGWVDHLFHKIWPPSAINYQF-WPKNPPAYREANEEYAKRLQLVVDNLFKYLSLGLDLEPNSFKDGAGGD-DLVYLMKINYYPPCPRPDLALGVA-HTDMSAITVLVPNEVPGLQVYKDGHWYDCKYIPNALIVHIGDQVEIMSNGKYKSVYHRTTVN 281          
BLAST of FC878289 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3)

HSP 1 Score: 141.739 bits (356), Expect = 5.515e-33
Identity = 85/269 (31.60%), Postives = 136/269 (50.56%), Query Frame = 3
Query:  132 SVPSKYFFEKDLNDDCINSEAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRWGTSFNVNVDKTLFWRDYLKIH----VHPQFNA-PQNPLGFSKTIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWILVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVN 923
            S+P  + F  D       +   ++PIID   L+ G  E R    ++I  A  + GFF+V+NHGV   +  +M    E FF L    K     ++   P R  +    +     +WRD L++     V    N  P  P G    I+++  + R++  ELL+ + E +G++  Y +  +   +  + +L +N YP CP P+  +G PPH D  L+T+L+     GL V + G WI V+P P +FVVN G  +E+++NG  KS+ HRA+ N
Sbjct:   13 SLPESFVFASDKVPPATKAVV-SLPIID---LSCGRDEVR----RSILEAGKELGFFQVVNHGVSKQVMRDMEGMCEQFFHLPAADKASLYSEERHKPNRLFSGATYDTGGEKYWRDCLRLACPFPVDDSINEWPDTPKGLRDVIEKFTSQTRDVGKELLRLLCEGMGIQADYFEGDL---SGGNVILNINHYPSCPNPDKALGQPPHCDRNLITLLLPGAVNGLEVSYKGDWIKVDPAPNAFVVNFGQQLEVVTNGLLKSIEHRAMTN 270          
BLAST of FC878289 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 7.203e-33
Identity = 90/257 (35.02%), Postives = 138/257 (53.70%), Query Frame = 3
Query:  183 NSEAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREY---AGKKLFDPIRWGTSFNVNVDKTLFWRDYLKIHVHPQ-----FNAPQNPLGFSKTIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHD-GK-WILVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVN 923
            N  +  IPII    +   + + R +    I  AC  WG F+V++HGV   +  +M   ++ FF L  E+K  +    GKK      +  S ++  +    WR+ +    +P         P  P G+    Q+Y +++ ELA +LL  + E++GLE+  + KA     D  Q +VVN YP CP+P++ +GL  H+D G +T+L+Q+   GL    D GK WI V P  G+FVVN+GDH   LSNG++K+  H+AVVN
Sbjct:   35 NQFSNEIPIISLEGIDDETGK-RAEICDKIVKACEDWGVFQVVDHGVDAEVISQMTTFAKEFFALPPEEKLRFDMSGGKKG----GFIVSSHLQGEVVQDWREIVTYFSYPTRARDYSRWPDKPEGWIAVTQKYSEKLMELACKLLDVLSEAMGLEKEALTKAC---VDMDQKVVVNFYPKCPEPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVN 283          
BLAST of FC878289 vs. ExPASy Swiss-Prot
Match: FL3H_CALCH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 7.203e-33
Identity = 88/257 (34.24%), Postives = 135/257 (52.53%), Query Frame = 3
Query:  183 NSEAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREY---AGKKLFDPIRWGTSFNVNVDKTLFWRDYLKIHVHP-----QFNAPQNPLGFSKTIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDG--KWILVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVN 923
            N+ +  IP+I  + +      +R +    I  AC  WG F+V++HGV   L  +M   +  FF L  ++K  +    GKK      +  S ++  +    WR+ +    +P         P  P  +    +EY K +  LA +LL+ + E++GLE+  + KA     D  Q +VVN YP CPQP++ +GL  H+D G +T+L+Q+   GL    DG   WI V P  G+FVVN+GDH   LSNG++K+  H+AVVN
Sbjct:   32 NTFSNEIPVISLAGIDGC---RRAEICDEIVKACEDWGIFQVVDHGVDTKLLSDMTGLARDFFHLPTQEKLRFDMTGGKKG----GFIVSSHLQGEAVQDWREIVTYFSYPIKARDYSRWPDKPNEWRAVTEEYSKVLMGLACKLLEVLSEAMGLEKEALTKAC---VDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGESWITVKPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVN 278          
BLAST of FC878289 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 7.203e-33
Identity = 82/243 (33.74%), Postives = 136/243 (55.97%), Query Frame = 3
Query:  195 ETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQK-REYAGKKLFDPIRWGTSFNVNVDKTLFWRDYLKIHVHPQFNAPQNPLGFSKTIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHV-GLHVRHDGKWILVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAV 917
            E  PII+   L     E R  T++ I +AC  WGFFE+++HG+P    D + R ++  +    EQ+ +E    K  + ++   + +++ + T + R   K ++      P     +   ++E+  ++ +LA +LL  + E+LGLE+ Y++KA            V+ YPPCP PE++ GL  H+D G L +L Q+D V GL +  DG+WI V P   S V+N+GD +E+++NGKY+SV HR +
Sbjct:    2 ENFPIINLEGLNG---EGRKATMEKIKDACENWGFFELVSHGIPTEFLDTVERLTKEHYRQCLEQRFKELVASKGLEAVKTEVN-DMDWESTFYLRHLPKSNIS---EVPDLEDQYRNVMKEFALKLEKLAEQLLDLLCENLGLEKGYLKKAFYGTNGPTFGTKVSNYPPCPNPELIKGLRAHTDAGGLILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVINLGDQLEVITNGKYRSVEHRVI 237          
BLAST of FC878289 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.605e-32
Identity = 85/279 (30.47%), Postives = 143/279 (51.25%), Query Frame = 3
Query:  117 SGRLTSVPSKYFFEKDLNDDCINSEAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRWGTSFNVNVDKTLFWRDYLKIHVHPQFNA----------PQNPLGFSKTIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWILVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVN 923
            SGR   +PS++ + +  +     +E   +P+ID   + SG P    +  + +G AC + GFF+V+NHG+   L  +  R  ++FF +   +K+  A ++  +   + +SF       L W++ L     P   A           ++     +    YC  +  L+ E+++ + ESLG+  ++ ++  +    +  ++ +N YPPC +P   +G  PH D   LTIL Q++  GL V  +G+W  + P   +FVVNIGD    LSNG+YKS LHRAVVN
Sbjct:   12 SGR-ADIPSQFIWPEGESPTPDAAEELHVPLIDIGGMLSGDPRATAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDAFFTMPLPEKQR-ALRRPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFE---GNDSIMRLNYYPPCQRPMETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVN 285          
BLAST of FC878289 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.096e-32
Identity = 85/247 (34.41%), Postives = 136/247 (55.06%), Query Frame = 3
Query:  195 ETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRWGTSFNVNVDKTLFWRDYLKIHVHPQFNAPQNPL---GFSKTIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLL--VVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHV-GLHVRHDGKWILVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAV 917
            ++ P+I+   L     ++R  T++ I +AC  WGFFE++NH +P  L DE+ R ++  +    EQ+     K+L      G   + N    + W     I   P  N  + P       K ++E+ +++ +LA ++L  + E+LGLE+ Y++ A    T         V+ YPPCP+PE+  GL  H+D G L +L Q+D V GL +  DG+W+ V P   S V+N+GD +E+++NGKYKSV+HR V
Sbjct:    2 DSFPVINMEKLEG---QERAATMKLINDACENWGFFELVNHSIPVELMDEVERLTKEHYKKCMEQRF----KELMASKVEGAVVDAN---DMDWESTFFIRHLPVSNLSEIPDLTDEHRKVMKEFAEKLEKLAEQVLDLLCENLGLEKGYLKMAFAGTTTGLPTFGTKVSNYPPCPRPELFKGLRAHTDAGGLILLFQDDRVAGLQLLKDGEWVDVPPMNHSIVINLGDQVEVITNGKYKSVMHRVV 238          
The following BLAST results are available for this feature:
BLAST of FC878289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
FL3H_HORVU1.896e-3334.12Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
ACCO4_PETHY1.896e-3333.741-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
G2OX8_ARATH4.223e-3335.06Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis th... [more]
FLS_EUSGR4.223e-3333.87Flavonol synthase/flavanone 3-hydroxylase OS=Eusto... [more]
IDS3_HORVU5.515e-3331.602'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vu... [more]
FL3H_PETHY7.203e-3335.02Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
FL3H_CALCH7.203e-3334.24Naringenin,2-oxoglutarate 3-dioxygenase OS=Callist... [more]
ACCO_PRUMU7.203e-3333.741-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
GAO1B_WHEAT1.605e-3230.47Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN... [more]
ACCO_PERAE2.096e-3234.411-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA24CD02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA24CD02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878289 ID=FC878289; Name=FC878289; organism=Citrus clementina; type=EST; length=928bp
TCTTATTATACAGGACTAGCAAATTCTATAGATAGTTTCATAATATTTAT
ACAGAAGCCTTCACACCTTGGAATACATATATATGAAAAATGTTTTGTGT
GAAAGGATTAAGCGAATCAGGTCGTCTCACATCTGTTCCTTCTAAGTATT
TCTTTGAAAAAGATCTTAATGATGATTGCATAAACTCAGAAGCAGAAACA
ATCCCCATCATAGACTTTTCCATGCTTACTTCTGGTTCTCCGGAACAACG
TTACAAGACAATCCAAGCCATCGGCAATGCATGCCTCAAATGGGGTTTCT
TTGAGGTAATTAATCATGGAGTACCGAACACATTGCGAGATGAGATGATA
AGGGCAAGTGAAAGTTTCTTCGATCTGTCGGACGAGCAAAAGAGAGAGTA
CGCAGGAAAGAAGCTGTTTGATCCAATAAGATGGGGGACAAGCTTCAACG
TTAATGTCGACAAGACATTATTCTGGAGGGATTACCTGAAGATCCACGTC
CATCCCCAGTTCAATGCTCCTCAAAACCCTCTTGGCTTCAGTAAAACCAT
ACAAGAATATTGCAAAAGAGTTCGAGAATTGGCCAATGAATTACTGAAAG
GGATTATGGAAAGCTTAGGATTGGAAGAAAGCTATATACAAAAGGCAATG
GATCTTGAGACAGACTCTCATCAGTTGCTTGTCGTCAATTTATACCCTCC
TTGTCCACAGCCAGAAGTAGTGATGGGGCTGCCTCCTCATTCGGATCATG
GCCTCTTAACCATCCTTATGCAGAATGACCATGTAGGTCTTCACGTACGG
CACGATGGCAAATGGATTCTCGTCAATCCTCCACCCGGCTCTTTCGTAGT
CAACATAGGAGACCACATGGAGATACTAAGTAACGGAAAGTACAAAAGCG
TGTTGCACAGAGCAGTAGTGAACGGGCA
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