FC878289
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878289 vs. ExPASy Swiss-Prot
Match: G3OX2_ARATH (Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA4H PE=1 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 3.575e-32 Identity = 99/287 (34.49%), Postives = 151/287 (52.61%), Query Frame = 3 Query: 108 LSESGRLTSVPSKYFFEKDLNDDCINSEA---ETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYA----GKKLFDPIRWGTSFNVNVDKTLFWRDYLKIHVHPQFNA----PQNPLGFSKTIQEYCKRVRELANELLKGIMESLGLEESYIQKA---MDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHV-RHDGKWILVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVN 923 LS S+P Y + DD + S + ET+P+ID S + + +G+AC WG F++ NHGVP+ L D++ + S F L ++K + A G + R + FN + W + + P + P + L + + I+EY + +++LA +L+ + SLG+EE IQ A D + + ++ +N YP CP+P+ MGL H+D L+TIL QN+ GL V R D W+ P PGS VVN+GD + IL+NG + SVLHRA VN Sbjct: 18 LSNPPDFKSLPDSYTWTP--KDDLLFSASASDETLPLIDLSDIHVAT---------LVGHACTTWGAFQITNHGVPSRLLDDIEFLTGSLFRLPVQRKLKAARSENGVSGYGVARIASFFNKKM-----WSEGFTVIGSPLHDFRKLWPSHHLKYCEIIEEYEEHMQKLAAKLMWFALGSLGVEEKDIQWAGPNSDFQ-GTQAVIQLNHYPKCPEPDRAMGLAAHTDSTLMTILYQNNTAGLQVFRDDVGWVTAPPVPGSLVVNVGDLLHILTNGIFPSVLHRARVN 287
BLAST of FC878289 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.669e-32 Identity = 85/249 (34.14%), Postives = 132/249 (53.01%), Query Frame = 3 Query: 189 EAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRWGTSFNVNVDKTLFWRDYLKIHVHPQFNAPQNPL---GFSKTIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLL--VVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHV-GLHVRHDGKWILVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAV 917 E+ + P+I+ +L QR + + +AC WG +E++NHG+ + L + + ++ + EQ+ + K D + N++ + T F R P N Q P T++E+ + LA LL + E LGLE+ Y++K +D V+ YPPCP+PE++ GL H+D G + +L Q+D V GL + DG+WI V P S VVNIGD +E+++NGKYKSVLHR V Sbjct: 2 ESGSFPVINMELLQGS---QRPAAMALLRDACENWGLYELLNHGISHELMNRVETVNKEHYRRFREQRFKEFASKTLDTVENVEPENLDWESTFFLRHL------PTSNISQIPDLDDDCRSTMKEFALELENLAERLLDLLCEDLGLEKGYLKKVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWIDVPPVRHSIVVNIGDQLEVITNGKYKSVLHRVV 241
BLAST of FC878289 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 6.098e-32 Identity = 85/279 (30.47%), Postives = 142/279 (50.90%), Query Frame = 3 Query: 117 SGRLTSVPSKYFFEKDLNDDCINSEAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRWGTSFNVNVDKTLFWRDYLKIHVHPQFNA----------PQNPLGFSKTIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWILVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVN 923 SGR +PS++ + + + +E +P+ID + SG P + + +G AC + GFF+V+NHG+ L + R ++FF + +K+ A + + + +SF L W++ L P A ++ + YC + L+ E+++ + ESLG+ ++ ++ + + ++ +N YPPC +P +G PH D LTIL Q++ GL V +G+W + P +FVVNIGD LSNG+YKS LHRAVVN Sbjct: 12 SGR-ADIPSQFIWPEGESPTPDAAEELHVPLIDIGGMLSGDPAAAAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQR-ALRHPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFE---GNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVN 285
BLAST of FC878289 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 6.098e-32 Identity = 78/240 (32.50%), Postives = 137/240 (57.08%), Query Frame = 3 Query: 204 PIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQK-REYAGKKLFDPIRWGTSFNVNVDKTLFWRDYLKIHVHPQFNAPQNPLGFSKTIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHV-GLHVRHDGKWILVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAV 917 PII+ + + R K ++ I +AC WGFFE++NHG+P+ D + + + + E++ +E K + + + +++ + T F R + ++ + + + K ++E+ K++ LA ELL + E+LGLE+ Y++KA V+ YPPCP+P+++ GL H+D G + +L Q+D V GL + DG WI V P + VVN+GD +E+++NG+YKSV+HR + Sbjct: 5 PIINLENIND---DGRAKILEQIEDACQNWGFFELVNHGIPHEFLDMVEKMTRDHYKKCMEERFKETVLSKGLEAAQAEVN-DMDWESTFFLRHLPESNISQMSDLDEE---YKKIMKEFAKKLENLAEELLDLLCENLGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGNWIDVPPMRHAIVVNLGDQLEVITNGRYKSVMHRVL 237
BLAST of FC878289 vs. ExPASy Swiss-Prot
Match: FL3H_MALDO (Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.964e-32 Identity = 89/257 (34.63%), Postives = 137/257 (53.31%), Query Frame = 3 Query: 183 NSEAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREY---AGKKLFDPIRWGTSFNVNVDKTLFWRDYLKIHVHPQFNA-----PQNPLGFSKTIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHV-RHDGK-WILVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVN 923 N + IPII + + +R + + I AC WG F++++HGV L EM + FF L E+K + GKK + S ++ + WR+ + +P + P P + + ++Y + LA +LL + E++GL+ + KA D Q +VVN YP CPQP++ +GL H+D G +T+L+Q+ GL R DGK WI V P G+FVVN+GDH +LSNG++K+ H+AVVN Sbjct: 33 NDFSNEIPIISLAGIDEVEG-RRGEICKKIVAACEDWGIFQIVDHGVDAELISEMTGLAREFFALPSEEKLRFDMSGGKKG----GFIVSSHLQGEAVQDWREIVTYFSYPIRHRDYSRWPDKPEAWREVTKKYSDELMGLACKLLGVLSEAMGLDTEALTKAC---VDMDQKVVVNFYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDDGKTWITVQPVEGAFVVNLGDHGHLLSNGRFKNADHQAVVN 281
BLAST of FC878289 vs. ExPASy Swiss-Prot
Match: ACCO2_DORSP (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Doritaenopsis sp. GN=ACO2 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.964e-32 Identity = 84/249 (33.73%), Postives = 134/249 (53.82%), Query Frame = 3 Query: 189 EAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRWGTSFNVNVDKTLFWRDYLKIHVHPQFNAPQNPL---GFSKTIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLL--VVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHV-GLHVRHDGKWILVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAV 917 E+ + P+I+ +L QR + + +AC WGFFE++NHG+ + L + + ++ + EQ+ + K D + N++ + T F R P N Q P T++E+ + + +LA LL + E LGLE+ Y+++ +D V+ YPPCP+P+++ GL H+D G + +L Q+D V GL + D +WI V P S VVNIGD +E+++NGKYKSVLHR V Sbjct: 2 ESGSFPVINMELLQGS---QRPAAMALLRDACENWGFFELLNHGISHELMNRVEAVNKEHYRRFREQRFKEFASKTLDSVENVDPDNLDWESTFFLRHL------PTSNISQIPDLDDDCRATMKEFARELEKLAERLLDLLCEDLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDREWIEVPPLRYSIVVNIGDQLEVITNGKYKSVLHRVV 241
BLAST of FC878289 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 1.040e-31 Identity = 89/276 (32.25%), Postives = 141/276 (51.09%), Query Frame = 3 Query: 132 SVPSKYFFEKDLNDDCINSEAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRWGTSFNVNVDKTLFWRDYLKIHVHPQFNAPQN-------PLG-----FSKTIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWILVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVN 923 ++P+++ + D IN +P+ID L S P + I AC K GFF V+NHG+ L + + FFD+ +K+ +K + + + +SF L W++ L + ++ LG F K QEYC+ + L+ ++++ + SLG++ Y ++ + E DS ++ +N YPPC +P++ +G PH D LTIL Q+ GL V + +W + P P +FVVNIGD LSN +YKS LHRAVVN Sbjct: 39 NIPNQFIWPDD-EKPSINVLELDVPLIDLQNLLS-DPSSTLDASRLISEACKKHGFFLVVNHGISEELISDAHEYTSRFFDMPLSEKQRVL-RKSGESVGYASSFTGRFSTKLPWKETLSFRFCDDMSRSKSVQDYFCDALGHGFQPFGKVYQEYCEAMSSLSLKIMELLGLSLGVKRDYFREFFE-ENDS--IMRLNYYPPCIKPDLTLGTGPHCDPTSLTILHQDHVNGLQVFVENQWRSIRPNPKAFVVNIGDTFMALSNDRYKSCLHRAVVN 308
BLAST of FC878289 vs. ExPASy Swiss-Prot
Match: G3OX4_ARATH (Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.040e-31 Identity = 98/296 (33.11%), Postives = 144/296 (48.65%), Query Frame = 3 Query: 120 GRLTSVPSKYFFEKDLNDDCINSEA--------ETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKK-------------LFDPIRWGTSFNVNVDKTLFWRDYLKIHVHPQFNA--PQNPLGFSKTIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQL----LVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHV-RHDGKWILVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVN 923 G L ++P + ++ D + + E+IP+ID S +P+ IG+A WG F++ NHG+ L D++ S++ FD+ E+K E A F+ W F + D +R++ FN P + + IQEY + +LA+ LL I+ SLG+ I+ A LE ++ + +N YP CP+PE MGL H+D +LTIL Q++ GL V R + W+ V P PG VVNIGD ILSNGK SV+HRA VN Sbjct: 14 GSLQTLPESFTWKLTAADSLLRPSSAVSFDAVEESIPVIDLS-----NPD----VTTLIGDASKTWGAFQIANHGISQKLLDDIESLSKTLFDMPSERKLEAASSDKGVSGYGEPRISPFFEKKMWSEGFTIADDS---YRNH--------FNTLWPHDHTKYCGIIQEYVDEMEKLASRLLYCILGSLGVTVEDIEWAHKLEKSGSKVGRGAIRLNHYPVCPEPERAMGLAAHTDSTILTILHQSNTGGLQVFREESGWVTVEPAPGVLVVNIGDLFHILSNGKIPSVVHRAKVN 289
BLAST of FC878289 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.040e-31 Identity = 78/243 (32.10%), Postives = 133/243 (54.73%), Query Frame = 3 Query: 204 PIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRW-GTSFNVNVDKTLFWRDYLKIHVHPQFNAPQNPL---GFSKTIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHV-GLHVRHDGKWILVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAV 917 PIID L + + +R + I +AC WGFF+V+NH + + L D++ R ++ E +++ +K D ++ G + + W + P N + P + K ++E+ ++ L+ +LL + E+LGLE++Y++ A V+ YPPCP+P+++ GL H+D G + +L Q+D V GL + DG W+ V P S VVN+GD +E+++NGKYKSV+HR + Sbjct: 8 PIIDMEKLNNYNGVERSLVLDQIKDACHNWGFFQVVNHSLSHELMDKVER-------MTKEHYKKFREQKFKDMVQTKGLVSAESQVNDIDWESTFYLRHRPTSNISEVPDLDDQYRKLMKEFAAQIERLSEQLLDLLCENLGLEKAYLKNAFYGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGHWVDVPPMKHSIVVNLGDQLEVITNGKYKSVMHRVI 243
BLAST of FC878289 vs. ExPASy Swiss-Prot
Match: G3OX1_ARATH (Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA4 PE=1 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 1.358e-31 Identity = 96/255 (37.65%), Postives = 135/255 (52.94%), Query Frame = 3 Query: 195 ETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQK----REYAGKKLFDPIRWGTSFNVNVDKTLFWRDYLKIHVHPQFNA----PQNPLGFSKTIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETD---SHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHV-RHDGKWILVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVN 923 E IP+ID P+ IG+AC WG F++ NHGVP L ++ + S F L ++K R G + R + FN + W + I P + PQ+ L + ++EY + +++LA++L+ + SLG+ E I+ A L +D + L +N YP CP+P+ MGL H+D LLTIL QN+ GL V R D W+ V P PGS VVN+GD ILSNG +KSVLHRA VN Sbjct: 55 ENIPLIDLD-----HPD----ATNQIGHACRTWGAFQISNHGVPLGLLQDIEFLTGSLFGLPVQRKLKSARSETGVSGYGVARIASFFNKQM-----WSEGFTITGSPLNDFRKLWPQHHLNYCDIVEEYEEHMKKLASKLMWLALNSLGVSEEDIEWA-SLSSDLNWAQAALQLNHYPVCPEPDRAMGLAAHTDSTLLTILYQNNTAGLQVFRDDLGWVTVPPFPGSLVVNVGDLFHILSNGLFKSVLHRARVN 294 The following BLAST results are available for this feature:
BLAST of FC878289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878289 ID=FC878289; Name=FC878289; organism=Citrus clementina; type=EST; length=928bpback to top |