FC878290
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878290 vs. ExPASy Swiss-Prot
Match: RSSA_YARLI (40S ribosomal protein S0 OS=Yarrowia lipolytica GN=RPS0 PE=3 SV=2) HSP 1 Score: 246.128 bits (627), Expect = 2.020e-64 Identity = 116/193 (60.10%), Postives = 150/193 (77.72%), Query Frame = 1 Query: 112 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 687 DIQ +LAA+ H+G+KN Q YVFK+R DG+ IIN+GKTWEK+Q+AAR+I A+ NP D++ SAR YGQRAVLKFA + A AIAGR TPG+FTN + SF EPRLLI+TDPRTDHQ IKEA+ NIP IA DTDSP+ +VD+ IP NNKG+HS+G ++W+++R VL++RG + + +W VM DL+FYR Sbjct: 12 DIQNLLAAQTHIGSKNVQVQNIPYVFKQRADGVNIINVGKTWEKIQLAARIIAAVPNPADVVAISARTYGQRAVLKFANHCGATAIAGRFTPGSFTNYITRSFKEPRLLIVTDPRTDHQAIKEASYVNIPVIALVDTDSPVEFVDVAIPCNNKGRHSVGLVWWMISREVLRLRGALEDRNTEWSVMPDLYFYR 204
BLAST of FC878290 vs. ExPASy Swiss-Prot
Match: RSSA2_SCHPO (40S ribosomal protein S0-B OS=Schizosaccharomyces pombe GN=rps0b PE=1 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 2.638e-64 Identity = 121/201 (60.20%), Postives = 152/201 (75.62%), Query Frame = 1 Query: 85 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 687 P L+ + DI+ +LAA+ H+G+KN + +ME YV+KRR+DGI+IINLGKTWEKL +AARVI IENP D+ V S+RPYG RAVLKFA +T A AIAGR TPG FTN + ++ EPRL+I+TDPR D Q IKEA+ NIP IA CDTDS + +VD+ IP NNKG SIG ++LLAR VL++RG I W+VM DL+FYR Sbjct: 8 PSVLNATDDDIKNLLAADSHIGSKNLEVRMENYVWKRRSDGIHIINLGKTWEKLVLAARVIATIENPADVCVISSRPYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREPRLIIVTDPRADAQAIKEASFVNIPVIALCDTDSILNHVDVAIPINNKGYKSIGLAWYLLAREVLRLRGNISRTTAWEVMPDLYFYR 208
BLAST of FC878290 vs. ExPASy Swiss-Prot
Match: RSSA_TOXGO (40S ribosomal protein SA OS=Toxoplasma gondii PE=2 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 4.500e-64 Identity = 121/201 (60.20%), Postives = 150/201 (74.63%), Query Frame = 1 Query: 91 QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHK--WDVMVDLFFYR 687 +LS +E I ML + H+GTKN + +M YVFK ++GI++INL KTWEK+ MAARVIVAIENP D++V SARPYG RAVLKF++Y A AIAGR TPG TNQ+ F EPRLLI+TDPRTD Q ++E+A N+P IA CDTDSP+ +VDI IP NNKGK SI ++WLLAR VL +RG + P WDVMVD+F +R Sbjct: 8 KLSLQEDSIAKMLICKAHIGTKNVEHKMRPYVFKSTSEGIHLINLAKTWEKILMAARVIVAIENPADVLVISARPYGSRAVLKFSQYVGAQAIAGRWTPGMLTNQITQKFMEPRLLIVTDPRTDAQAVRESAYANVPVIALCDTDSPLEHVDICIPCNNKGKESIALMYWLLAREVLYLRGEL-PSRSVPWDVMVDMFLWR 207
BLAST of FC878290 vs. ExPASy Swiss-Prot
Match: RSSA_DICDI (40S ribosomal protein SA OS=Dictyostelium discoideum GN=rpsA PE=1 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 2.233e-63 Identity = 122/201 (60.70%), Postives = 146/201 (72.64%), Query Frame = 1 Query: 85 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 687 P L+ + DI MLA + HLG N D +ME Y +KR+++G +IINL KTWEK+Q+AARVIVAIENP DI V SA+P GQRAVLKFA + A A +GR TPGTFTNQ+Q+ F EPRLLI+ DP D QP+ EA+ NIPTIA CDT S + VDI IP NN+GK+SI +FWLLAR VL +RGTI W V VDLF YR Sbjct: 5 PAALNPHQDDILKMLACQTHLGGNNVDVEMESYTWKRKDNGHFIINLAKTWEKIQLAARVIVAIENPADISVISAKPLGQRAVLKFANFIGATAFSGRFTPGTFTNQIQSKFTEPRLLIVADPLLDKQPLMEASYVNIPTIALCDTTSCLDGVDIAIPCNNRGKNSIALMFWLLAREVLYLRGTIPRNTTWSVKVDLFIYR 205
BLAST of FC878290 vs. ExPASy Swiss-Prot
Match: RSSA_CHLVR (40S ribosomal protein SA OS=Chlorohydra viridissima PE=2 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 4.975e-63 Identity = 121/198 (61.11%), Postives = 147/198 (74.24%), Query Frame = 1 Query: 94 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 687 LS KE D+ LAA VHLG+ N + YVFKR++DGI+IINL KTWEKL +AAR+I +IENP D+ V S+RPYG RAVLKFA+ T A IAGR TPGTFTNQ+Q F EPRLLI TDP+ D+Q + EA+ NIP IA C+TDSP+R+VD IP NN+G SIG ++W+LAR VL +RG I W+VM DLFFYR Sbjct: 8 LSLKEEDVVKFLAAGVHLGSTNVGSSCQGYVFKRKSDGIHIINLRKTWEKLILAARIIASIENPADVCVISSRPYGTRAVLKFAQSTGAIPIAGRFTPGTFTNQIQKRFREPRLLISTDPQHDNQALTEASYVNIPVIALCNTDSPLRFVDCAIPCNNRGIQSIGTMWWILAREVLHLRGIISRKTPWNVMPDLFFYR 205
BLAST of FC878290 vs. ExPASy Swiss-Prot
Match: RSSA_USTMA (40S ribosomal protein S0 OS=Ustilago maydis GN=RPS0 PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 5.500e-62 Identity = 113/201 (56.22%), Postives = 149/201 (74.13%), Query Frame = 1 Query: 85 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 687 P L+ E DI ++LAA+ H+GTKN D QM Y++KRR DGI+++N+GKTWEK+ AAR++ AIENP DI V S R YG RAVLKFA T A AIAGR TPG+FTN + SF EPR++++TDPR DHQ I+EA+ NIP I+F D+DSP+++VD+ IP N +G+HS+G L+WLL R VL+++ G VM D+FFYR Sbjct: 5 PAALNPTEEDISLLLAAQTHIGTKNADKQMAPYIYKRRADGIHLLNIGKTWEKIVFAARILAAIENPADICVISGRQYGHRAVLKFAAQTGATAIAGRFTPGSFTNYITRSFKEPRVIVVTDPRVDHQAIREASYVNIPCISFVDSDSPLKFVDVAIPGNVRGRHSVGLLWWLLCRTVLRIK-----GGDLSVMPDMFFYR 200
BLAST of FC878290 vs. ExPASy Swiss-Prot
Match: RSSA_BRUMA (40S ribosomal protein SA OS=Brugia malayi GN=Bm1_41245 PE=3 SV=2) HSP 1 Score: 235.343 bits (599), Expect = 3.565e-61 Identity = 116/200 (58.00%), Postives = 148/200 (74.00%), Query Frame = 1 Query: 103 KEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG--TIRPGHKWD---VMVDLFFYR 687 KE D +LA + H+G NCDFQME+YV+KRR DGI+II+L KTWEKL +AAR I AI+NPGD+ V SARPY QRA+LKFA +T + I GR TPG TNQ+Q F EPRLLI++DPR DHQ + EA+ +P I+FC+TDSP++++DI IP NNKG SIG ++WLLAR VL ++G T + G D +M DL+FYR Sbjct: 11 KEEDAIKLLACQTHVGAANCDFQMEQYVWKRRADGIHIIHLRKTWEKLLLAARAIAAIDNPGDVCVVSARPYAQRALLKFAAHTGSTPIFGRFTPGCLTNQIQKQFKEPRLLIVSDPRVDHQAVTEASYVGVPVISFCNTDSPLKFIDIAIPCNNKGVQSIGLMWWLLAREVLLIKGKMTRQTGFVLDDKEIMPDLYFYR 210
BLAST of FC878290 vs. ExPASy Swiss-Prot
Match: RSSA_THEAN (40S ribosomal protein SA OS=Theileria annulata GN=TA10185 PE=3 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 4.656e-61 Identity = 111/204 (54.41%), Postives = 147/204 (72.06%), Query Frame = 1 Query: 76 ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 687 A +L+ E I+MML A+VH+GTKN + +M +YV+ R +G+++INL T EKL++AAR IV + NP +++V SARPYG RAVLKF+ Y +H IAGR PGT TNQ+ F EPRLL+ TDPRTD Q +KE++ ++P IA CDTDSP+ YVDI IP NNKGK SI ++WLLAR VL +R ++ WDV+VD FF+R Sbjct: 2 AAPTSKLTPDEDSIRMMLTAKVHIGTKNVENKMRKYVYSRTQEGVHLINLAHTLEKLKVAARAIVTVSNPEEVVVVSARPYGSRAVLKFSHYVGSHPIAGRWIPGTLTNQITQKFIEPRLLVATDPRTDAQSLKESSYVSLPVIALCDTDSPLNYVDIAIPCNNKGKESIALMYWLLAREVLYLRDQLKRWMPWDVLVDTFFWR 205
BLAST of FC878290 vs. ExPASy Swiss-Prot
Match: RSSA_LACTC (40S ribosomal protein S0 OS=Lachancea thermotolerans (strain CBS 6340) GN=RPS0 PE=3 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 7.942e-61 Identity = 113/193 (58.55%), Postives = 145/193 (75.13%), Query Frame = 1 Query: 112 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVMVDLFFYR 687 D Q++LAA VHLG+KN E YVFK R DG+ ++N+GKTWEK+ +AAR+I AI NP D++ S+R YGQRAVLKF+ +T A AIAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKE++ NIP IA D DSP YVD+ IP NNKGKHSIG +++LLAR VL++RG+ + W +M DL+FYR Sbjct: 13 DAQLLLAANVHLGSKNVQVHQEPYVFKTRPDGVNVVNVGKTWEKIVLAARIIAAIPNPEDVVAISSRTYGQRAVLKFSAHTGATAIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKESSYVNIPVIALTDLDSPSEYVDVAIPCNNKGKHSIGLIWYLLAREVLRLRGSLVDRTQPWSIMPDLYFYR 205
BLAST of FC878290 vs. ExPASy Swiss-Prot
Match: RSSA_THEPA (40S ribosomal protein SA OS=Theileria parva GN=TP04_0748 PE=3 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 1.037e-60 Identity = 110/204 (53.92%), Postives = 147/204 (72.06%), Query Frame = 1 Query: 76 ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 687 A +L+ E I+MML A+VH+GTKN + +M +YV+ R +G+++INL T EKL++AAR IV + NP +++V SARPYG RAVLKF+ Y +H IAGR PGT TNQ+ F EPRLL+ TDPRTD Q ++E++ ++P IA CDTDSP+ YVDI IP NNKGK SI ++WLLAR VL +R ++ WDV+VD FF+R Sbjct: 2 AAPTSKLTPDEDSIRMMLTAKVHIGTKNVENKMRKYVYSRTQEGVHLINLAHTLEKLKVAARAIVTVSNPEEVVVVSARPYGSRAVLKFSHYVGSHPIAGRWIPGTLTNQITQKFIEPRLLVATDPRTDAQSLRESSYVSLPVIALCDTDSPLNYVDIAIPCNNKGKESIALMYWLLAREVLYLRDQLKRWMPWDVLVDTFFWR 205 The following BLAST results are available for this feature:
BLAST of FC878290 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878290 ID=FC878290; Name=FC878290; organism=Citrus clementina; type=EST; length=904bpback to top |