FC878296
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878296 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 8.478e-25 Identity = 82/256 (32.03%), Postives = 133/256 (51.95%), Query Frame = 1 Query: 133 SCSQTPYPEICNHYTATNFLSNLELDQTQFSFRDLNLKVTIDQAIH--AHKLISTMDLSSFNK--LAKLALVDCKDLYDDTVNHLNRSMSS-----SNPIDSVTWLSAAIANQETCKNGFTDFNLHSHLQSLPFMSGNFSKLLSNSLAITKSTVSS---SSIPYAYKRNGGRRLLVNGFPTWVSAADRRLLQSSGVGPKADVVVAQDGSGNYKTISEGVAAAVKLGGGSKRVVIYVKRGVYRE-NVEIKRSMKNLM 861 +C T +PE+C + L + S +DL + VT++ +H +H L S+ LS + A+ A C +L DD+V+ L+R++SS + P D TWLSAA+ N +TC GF + + N S+L+SN LAI ++ + +P +R G FP W+ +R +L+ +AD++V++DG+G KTISE + A + ++R++IYVK G Y E N+++ R NLM Sbjct: 90 ACELTRFPELC-----VDSLMDFPGSLAASSSKDL-IHVTVNMTLHHFSHALYSSASLSFVDMPPRARSAYDSCVELLDDSVDALSRALSSVVSSSAKPQDVTTWLSAALTNHDTCTEGFDGVDDGGVKDHMTAALQNLSELVSNCLAIFSASHDGDDFAGVPIQNRRLLGVEEREEKFPRWMRPKEREILEMPVSQIQADIIVSKDGNGTCKTISEAIKKAPQ--NSTRRIIIYVKAGRYEENNLKVGRKKINLM 337
BLAST of FC878296 vs. ExPASy Swiss-Prot
Match: PME35_ARATH (Probable pectinesterase/pectinesterase inhibitor 35 OS=Arabidopsis thaliana GN=PME35 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.224e-23 Identity = 84/266 (31.58%), Postives = 139/266 (52.26%), Query Frame = 1 Query: 88 FLIFSLNFAHGELITSCSQTPYPEICNHYTATNFLSNLELDQTQFSFRDLNLKVTIDQAIHAHKLISTMDLS--SFNKLAKLALVDCKDLYDDTVNHLNRSM---SSSNPIDSV-TWLSAAIANQETCKNGFTD-FNLHSHLQSLPFMSGNFSKLLSNSLAITKSTVSSSSIPYAYKRNGGRRLLVN-GFPTWVSAADRRLLQSSGVGPKADVVVAQDGSGNYKTISEGVAAAVKLGGGSKRVVIYVKRGVYRENVEIKRSMKNLM 861 FL+ +L + S + + +I H + + + F ++++++D A+ A L + LS + L + DC +L DDT++ L R + + D V TWLSAA+ NQETCK ++ + + ++ + N + LL+NSL + S SS + GGR+LL + FPTWVS++DR+LL++S + VVA DGSG + +++E +A+ K GS R VI++ G Y+EN+ I KN+M Sbjct: 20 FLVLNLLSLQTSVFAHSSNSKFTKISRHPNSDSSSRTKPSTSSNKGFLS-SVQLSLDHALFARSLAFNLTLSHRTSQTLMLDPVNDCLELLDDTLDMLYRIVVIKRKDHVNDDVHTWLSAALTNQETCKQSLSEKSSFNKEGIAIDSFARNLTGLLTNSLDMFVSDKQKSSS--SSNLTGGRKLLSDHDFPTWVSSSDRKLLEASVEELRPHAVVAADGSGTHMSVAEALASLEK---GSGRSVIHLTAGTYKENLNIPSKQKNVM 279
BLAST of FC878296 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.768e-22 Identity = 77/233 (33.05%), Postives = 114/233 (48.93%), Query Frame = 1 Query: 199 LELDQTQFSFRDLNLKVTIDQAIHAHKLISTMDLSSFNKLAKLALVDCKDLYDDTVNHLNRSMSSSN------------PIDSVTWLSAAIANQETCKNGFTDFNLHSHLQSLPFMSGNFSKLLSNSLAITKSTVSSSSIPYAYKRNGGRRLLVNGFPTWVSAADRRLLQSSGVGPKADVVVAQDGSGNYKTISEGVAAAVKLGGGSKRVVIYVKRGVYRENVEIKRSMKNLM 861 L++ T+F+ +LK TID ++S + + A+ DC DL D + + LN S+S+S D TWLSAA+ NQ+TC NGF N + G S L ++ + ++ N ++ P+WV DR+LLQ+ GV D +VAQDG+GN+ +++ V AA +R VIY+KRG Y+ENVEIK+ NLM Sbjct: 49 LKVSATEFAG---SLKDTIDAVQQVASILSQFANAFGDFRLANAISDCLDLLDFSADELNWSLSASQNQKGKNNSTGKLSSDLRTWLSAALVNQDTCSNGFEGTN--------SIVQGLISAGLGQVTSLVQELLTQ------VHPNSNQQGPNGQIPSWVKTKDRKLLQADGVS--VDAIVAQDGTGNFTNVTDAVLAAPDYS--MRRYVIYIKRGTYKENVEIKKKKWNLM 260
BLAST of FC878296 vs. ExPASy Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.309e-22 Identity = 78/222 (35.14%), Postives = 112/222 (50.45%), Query Frame = 1 Query: 244 KVTIDQAIHAHKLISTMDLSSFNKLAKLALVDCKDLYDDTVNHLNRSMSSSNP------------IDSVTWLSAAIANQETCKNGFTDFNLHSHLQSLPFMSGNFSKL---LSNSLAITKSTVSSSSI-PYAYKRNGGRRLLVNGFPTWVSAADRRLLQSSGVGPKADVVVAQDGSGNYKTISEGVAAAVKLGGGSKRVVIYVKRGVYRENVEIKRSMKNLM 861 K +D A ++S D + A+VDC DL D L+ +S+S D TW+SAA++NQ+TC +GF N ++ + ++G SK+ + N L + S S P + + FP+WV DR+LLQ+ + AD VVA DG+GN+ TIS+ V AA +KR VI+VKRGVY ENVEIK+ N+M Sbjct: 52 KTVVDAITKAVAIVSKFDKKAGKSRVSNAIVDCVDLLDSAAEELSWIISASQSPNGKDNSTGDVGSDLRTWISAALSNQDTCLDGFEGTN--GIIKKI--VAGGLSKVGTTVRNLLTMVHSPPSKPKPKPIKAQTMTKAHSGFSKFPSWVKPGDRKLLQTDNI-TVADAVVAADGTGNFTTISDAVLAAPDYS--TKRYVIHVKRGVYVENVEIKKKKWNIM 266
BLAST of FC878296 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 6.717e-22 Identity = 83/279 (29.75%), Postives = 135/279 (48.39%), Query Frame = 1 Query: 112 AHGELITSCSQTPYPEICNHYTATNFLSNLELDQTQFSFRDLNLKVTIDQAIHAHKLISTM--DLSSFNKLAKLALVDCKDLYDDTVNHLNRSMSSSNPI-----------DSVTWLSAAIANQETCKNGFTDFNLHSHLQSLPFMSG--NFSKLLSNSLAITKSTVSSSSIPY-------AYKRNGGRRLLV-------NGFPTWVSAADRRLLQSSGVGPKADVVVAQDGSGNYKTISEGVAAAVKLGGGSKRVVIYVKRGVYRENVEIKRSMKNLM 861 +H L + CS T YPE+C ++A EL +Q + +L +T H + + + AL DC + D+T++ L+ ++ + D T +S+AI NQ TC +GF+ + ++ + G + + SN+LA+ K+ + + + N R+L +G+P W+S DRRLLQ S + KAD VA DGSG++ T++ VAAA + +KR VI++K GVYRENVE+ + N+M Sbjct: 58 SHAILKSVCSSTLYPELC--FSAVAATGGKELT-SQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLETIDETLDELHVAVEDLHQYPKQKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKA-LLKGQVHVEHMCSNALAMIKNMTETDIANFELRDKSSTFTNNNNRKLKEVTGDLDSDGWPKWLSVGDRRLLQGSTI--KADATVADDGSGDFTTVAAAVAAAPEKS--NKRFVIHIKAGVYRENVEVTKKKTNIM 328
BLAST of FC878296 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.773e-22 Identity = 78/254 (30.71%), Postives = 123/254 (48.43%), Query Frame = 1 Query: 133 SCSQTPYPEICNHYTATNFLSNLELDQTQFSFRDLNLKVTIDQAIHAHKLISTMDLSSFNKLAKLALVDCKDLYDDTVNHLNRSMSS-------SNPIDSVTWLSAAIANQETCKNGFTDFNLHSHLQSLPFMSG--NFSKLLSNSLAITKSTVSS-SSIPYAYKRNGGRRLLVNGFPTWVSAADRRLLQSSGVGPKADVVVAQDGSGNYKTISEGVAAAVKLGGGSKRVVIYVKRGVY-RENVEIKRSMKNLM 861 +CS++ YP +C T +F +L D+ + N T+ + A ST+ + + A C +L DD+V+ L R++SS + D +TWLS+A+ N +TC +GF + + + S+++SN LAI V S +P R P W+ DR LL + +AD+ V++DGSG +KTI+E + A + S+R VIYVK G Y EN+++ R NLM Sbjct: 78 TCSKSLYPNLCID-TLLDFPGSLTADENELIHISFN--ATLQKFSKALYTSSTITYTQMPPRVRSAYDSCLELLDDSVDALTRALSSVVVVSGDESHSDVMTWLSSAMTNHDTCTDGFDEIEGQGGEVKDQVIGAVKDLSEMVSNCLAIFAGKVKDLSGVPVVNNRKLLGTEETEELPNWLKREDRELLGTPTSAIQADITVSKDGSGTFKTIAEAIKKAPE--HSSRRFVIYVKAGRYEEENLKVGRKKTNLM 326
BLAST of FC878296 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.146e-21 Identity = 92/268 (34.33%), Postives = 132/268 (49.25%), Query Frame = 1 Query: 124 LITSCSQTPYPEICNHYTATNFLSNLELDQT----QFSFRDLNLKVTIDQAIHAHKLISTMDLSSFNKLAKLALVDCKDLYDDTVNHLNRSMSSSNPI--------------DSVTWLSAAIANQETCKNGFTDFNLHSHL-QSLPFMSGNFSKLLSNSLAITKSTV---SSSSIPYAYKRNGGRRLL-VNGFPTWVSAADRRLLQSSGVGPKADVVVAQDGSGNYKTISEGVAAAVKLGGGSKRVVIYVKRGVYRENVEIKRSMKNL 858 L T C+ T YP C + +S L L +T + FR L+L+VT D+ L + + ++ K AL C D++D V+ +N ++SS + + D +TWLS+A+ + TC + + N +S + Q L N ++ SNSLAI + S S IP GRRLL N FP WV RRLLQ+ + P V VA DGSG+ +T++E V K G VIYVK G Y ENV +K+ N+ Sbjct: 459 LRTVCNVTNYPASC-----ISSISKLPLSKTTTDPKVLFR-LSLQVTFDELNSIVGLPKKLAEETNDEGLKSALSVCADVFDLAVDSVNDTISSLDEVISGGKKNLNSSTIGDLITWLSSAVTDIGTCGDTLDEDNYNSPIPQKLKSAMVNSTEFTSNSLAIVAQVLKKPSKSRIPVQ-----GRRLLNSNSFPNWVRPGVRRLLQAKNLTP--HVTVAADGSGDVRTVNEAVWRVPK--KGKTMFVIYVKAGTYVENVLMKKDKWNV 711
BLAST of FC878296 vs. ExPASy Swiss-Prot
Match: PME13_ARATH (Probable pectinesterase/pectinesterase inhibitor 13 OS=Arabidopsis thaliana GN=PME13 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.553e-21 Identity = 86/256 (33.59%), Postives = 135/256 (52.73%), Query Frame = 1 Query: 130 TSCSQTPYPEICNHYTATNFLSNLELDQTQFSFRDLNLKVTIDQAIHAHKLISTMDLSSFNKLAKLALVDCKDLYDD----TVNHLNR-SMSSSNPIDSV-----TWLSAAIANQETCKNGFTDFNLHSHLQSLPFMSGNFSKLL-SNSLAITKS-TVSSSSIPYAYKRNGGRRLLVNGFPTWVSAADRRLLQSSGV-GPKADVVVAQDGSGNYKTISEGVAAAVKLGGGSKRVVIYVKRGVYRENVEIKRSMKNL 858 T CS T Y +IC LD + V D + K++S L + N+ K A+ CK L +D TV LN+ +++ N + V +WLSA ++ QETC +GF + NL S +++ S N S++L SNSLA+ K+ T + S + +R+ L++G P+WVS DRR+L++ V K + VA+DGSG++ TI++ + A + G R +IYVK+G+Y E V + + NL Sbjct: 111 TLCSSTLYMQICEKTLKNRTDKGFALDNPTTFLKSAIEAVNEDLDLVLEKVLS---LKTENQDDKDAIEQCKLLVEDAKEETVASLNKINVTEVNSFEKVVPDLESWLSAVMSYQETCLDGFEEGNLKSEVKT----SVNSSQVLTSNSLALIKTFTENLSPVMKVVERH-----LLDGIPSWVSNDDRRMLRAVDVKALKPNATVAKDGSGDFTTINDALRAMPEKYEG--RYIIYVKQGIYDEYVTVDKKKANL 352
BLAST of FC878296 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.334e-21 Identity = 84/260 (32.31%), Postives = 130/260 (50.00%), Query Frame = 1 Query: 136 CSQTPYPEICNHYTATNFLSNLELDQTQFSFRDLNLKVTIDQ-AIHAHKLISTMDLSSFNKLAKLALVDCKDLYDDTVNHLNRSMS----------SSNPIDSV-TWLSAAIANQETCKNGFTDFN---LHSHLQSLPFMSGNFSKLLSNSLAITKSTV---SSSSIPYAYKRNGGRRLLVNGFPTWVSAADRRLLQSSGVGPKADVVVAQDGSGNYKTISEGVAAAVKLGGGSKRVVIYVKRGVYRENVEIKRSMKNLM 861 C T YP C +++ + L + F+ L+L+V ID+ + KL + + + +L K A+ C ++ D ++ LN S+S SS + +V TWLSAA+ +Q+TC + + N LQ + N ++ SNSLAI + S P + RRLL GFP W+ AA+RRLL+ D VVA+DGSG +KTI E + K +R +YVK G Y EN+++ ++ N+M Sbjct: 81 CDTTRYPSSC--FSSISSLPESNTTDPELLFK-LSLRVAIDELSSFPSKLRANAEQDA--RLQK-AIDVCSSVFGDALDRLNDSISALGTVAGRIASSASVSNVETWLSAALTDQDTCLDAVGELNSTAARGALQEIETAMRNSTEFASNSLAIVTKILGLLSRFETPIHH-----RRLL--GFPEWLGAAERRLLEEKNNDSTPDAVVAKDGSGQFKTIGEALKLVKK--KSEERFSVYVKEGRYVENIDLDKNTWNVM 325
BLAST of FC878296 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.687e-21 Identity = 86/279 (30.82%), Postives = 126/279 (45.16%), Query Frame = 1 Query: 100 SLNFAHGELITSCSQTPYPEICNHYTATNFLSNLELDQTQFSFRDLNLKVTIDQAIHAHKLISTMDLSSFNKLA---KLALVDCKDLYDDTVNHLNRSMS--------SSNPIDSVTWLSAAIANQETCKNGFTDFNLHSHLQSLPFMSGNFSKLLSNSLAITKSTVSSSSIPYAYKR---------NGGRRLLVNGFPTWVSAADRRLLQSSGVG-----PKADVVVAQDGSGNYKTISEGVAAAVKLGGGSKRVVIYVKRGVYRENVEIKRSMKNLM 861 SLN + C TPYP+ C +T+ ++ + SF L+ + +A L+S +S N L + +L DCKDL+ T + L RS+S S D+ +LSAA+ N+ TC L+ L SG L S T +S+S +R N R L+ FP WV D R L+ S G P +VVA DG+GN+ TI+E ++ A + + RV+IYVK GVY EN++I N++ Sbjct: 29 SLNPHETSATSFCKNTPYPDAC--FTSLKLSISINISPNILSFLLQTLQTALSEAGKLTDLLSGAGVS--NNLVEGQRGSLQDCKDLHHITSSFLKRSISKIQDGVNDSRKLADARAYLSAALTNKITC------------LEGLESASGPLKPKLVTSFTTTYKHISNSLSALPKQRRTTNPKTGGNTKNRRLLGLFPDWVYKKDHRFLEDSSDGYDEYDPSESLVVAADGTGNFSTINEAISFAPNM--SNDRVLIYVKEGVYDENIDIPIYKTNIV 289 The following BLAST results are available for this feature:
BLAST of FC878296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878296 ID=FC878296; Name=FC878296; organism=Citrus clementina; type=EST; length=862bpback to top |