FC878296
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878296 vs. ExPASy Swiss-Prot
Match: PME28_ARATH (Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.427e-21 Identity = 88/298 (29.53%), Postives = 140/298 (46.98%), Query Frame = 1 Query: 43 LVSMDKLVLIQLFIHFLIF-----SLNFAHGELITS-------CSQTPYPEICN---HYTATNFLSNLELDQTQFSFRDLNLKVTIDQAIHAHKLISTMDLSSFNKLAKLALVDCKDLYDDTVNHLNRSMSSS-----NPIDSVT-----WLSAAIANQETCKNGFTDFNLHSHLQSLPFMSGNFSKLLSNSLAITKSTVSSSSIPYAYKRNGGRRLLVNGFPTWVSAADRRLLQSSGVGPKADVVVAQDGSGNYKTISEGVAAAVKLGGGSKRVVIYVKRGVYRENVEIKRSMKNLM 861 ++S+ ++LI + + I S N E+ TS C+ T Y E C A + LEL +T F+ T+ Q K TM + AK+AL CK+L D + L++S + +D WLSA I++++TC +GF ++ +++ +L N LA+ + +S+ RRLL FP+W+ A RRLL + K D+VVAQDGSG YKTI+E + K + V+++K G+Y+E V++ RSM +L+ Sbjct: 18 IISISSVLLISMVVAVTIGVSVNKSDNAGDEEITTSVKAIKDVCAPTDYKETCEDTLRKDAKDTSDPLELVKTAFN-------ATMKQISDVAKKSQTMIELQKDPRAKMALDQCKELMDYAIGELSKSFEELGKFEFHKVDEALVKLRIWLSATISHEQTCLDGFQGTQGNAG-ETIKKALKTAVQLTHNGLAMV-TEMSNYLGQMQIPEMNSRRLLSQEFPSWMDARARRLLNAPMSEVKPDIVVAQDGSGQYKTINEALNFVPK--KKNTTFVVHIKEGIYKEYVQVNRSMTHLV 304
BLAST of FC878296 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.655e-20 Identity = 80/260 (30.77%), Postives = 123/260 (47.31%), Query Frame = 1 Query: 136 CSQTPYPEICNHY---TATNFLSNLELDQTQFSFRDLNLKVTIDQAIHAHKLISTMDLSSFNKLAKLALVDCKDLYDDTVNHLNRSMSSSNP----------IDSVTWLSAAIANQETCKNGFTDFNLHSHLQSLPFMSGNFSKLLSNSLAITKST---VSSSSIPYAYKRNGGRRLLVNGFPTWVSAADRRLLQSSGV--GPKADVVVAQDGSGNYKTISEGVAAAVKLGGGSKRVVIYVKRGVYRENVEIKRSMKNLM 861 C+ T Y + C N +EL +T F+ VT+ Q A K T+ + ++AL CK+L D ++ L+ S I+ WLSAAI+++ETC GF ++ +++ +L N LAI V IP RRLL GFP+WV R+LLQ++ K D+VVAQDGSG YKTI+E + K + V+++K G+Y+E V++ ++M +L+ Sbjct: 62 CAPTDYRKTCEDTLIKNGKNTTDPMELVKTAFN-------VTMKQITDAAKKSQTIMELQKDSRTRMALDQCKELMDYALDELSNSFEELGKFEFHLLDEALINLRIWLSAAISHEETCLEGFQGTQGNAG-ETMKKALKTAIELTHNGLAIISEMSNFVGQMQIPGL----NSRRLLAEGFPSWVDQRGRKLLQAAAAYSDVKPDIVVAQDGSGQYKTINEALQFVPK--KRNTTFVVHIKAGLYKEYVQVNKTMSHLV 307
BLAST of FC878296 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.655e-20 Identity = 91/270 (33.70%), Postives = 128/270 (47.41%), Query Frame = 1 Query: 136 CSQTPYPEICNHYTATNFLSNLELDQTQFSFRDLNLKVTIDQAIHAHKLISTMDLSSFNKLAKLALVDCKDLYDDTVNHLN------------RSMSSSNPIDSVTWLSAAIANQETC-------KNGFTDFNLHSHLQSLPFMSGNFSKLLSNSLAITK---STVSSSSIPYAYKRNGGRRLLVN------GFPTWVSAADRRLLQSSGVGPKADVVVAQDGSGNYKTISEGVAAAVKLGGGSKRVVIYVKRGVYRENVEIKRSMKNLM 861 CS T +PE C + SN +T F L+LKV ID+ L + + ++ K AL C DL +D ++ LN +++SSS D TWLSA + + ETC K T++ + Q+L ++ SNSLAI S +S IP + RRL+ + F W A RRLLQ++G+ P DV VA DG+G+ T++E VA K K VIYVK G Y ENV + +S N+M Sbjct: 77 CSVTRFPESCISSISKLPSSNTTDPETLFK---LSLKVIIDELDSISDLPEKLSKETEDERIKSALRVCGDLIEDALDRLNDTVSAIDDEEKKKTLSSSKIEDLKTWLSATVTDHETCFDSLDELKQNKTEYANSTITQNLKSAMSRSTEFTSNSLAIVSKILSALSDLGIPIHRR----RRLMSHHHQQSVDFEKW---ARRRLLQTAGLKP--DVTVAGDGTGDVLTVNEAVAKVPK--KSLKMFVIYVKSGTYVENVVMDKSKWNVM 332
BLAST of FC878296 vs. ExPASy Swiss-Prot
Match: PME16_ARATH (Probable pectinesterase/pectinesterase inhibitor 16 OS=Arabidopsis thaliana GN=PME16 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.072e-19 Identity = 65/179 (36.31%), Postives = 96/179 (53.63%), Query Frame = 1 Query: 337 DCKDLYDDTVNHLNRSMSSSNPIDSVTWLSAAIANQETCKNGFTD-FNLHSHLQSLPFMSGNFSKLLSNSLAITKSTVSSSSIPYAYKRNGGRRLLVNG--FPTWV-SAADRRLLQSSGVGPKADVVVAQDGSGNYKTISEGVAAAVKLGGGSKRVVIYVKRGVYRENVEIKRSMKNLM 861 DC +L DDT++ L+R + ++ D TWLSAA+ NQ+TC+ + + H ++ F++ N + LL++SL + S S R+LL FPT+V S+ RRLL++ D VVA DGSG +KTI E + + L R IY+K G Y EN+ I KN+M Sbjct: 100 DCLELLDDTLDMLSRIHADNDEEDVHTWLSAALTNQDTCEQSLQEKSESYKHGLAMDFVARNLTGLLTSSLDLFVSVKSKH-----------RKLLSKQEYFPTFVPSSEQRRLLEAPVEELNVDAVVAPDGSGTHKTIGEAL-LSTSLASSGGRTKIYLKAGTYHENINIPTKQKNVM 266
BLAST of FC878296 vs. ExPASy Swiss-Prot
Match: PME38_ARATH (Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana GN=PME38 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.829e-19 Identity = 78/247 (31.58%), Postives = 118/247 (47.77%), Query Frame = 1 Query: 136 CSQTPYPEICNHYTATNFLSNLELDQTQFSFRDLNLKVTIDQAIHAHKLISTMDLSSFNKLAKLALVDCKDLYDDTVNHLNRSMSSSNPI----DSVTWLSAAIANQETCKNGFTDFNLHSH-LQSLPFMSGNFSKLLSNSLAITKSTVSSSSIPYAYKRNGGRRLLVNGFPTWVSAADRRLLQSSGVGPKADVVVAQDGSGNYKTISEGVAAAVKLGGGSKRVVIYVKRGVYRENVEIKRSMKNLM 861 C +TP+P C T + + + T F ++++ T+D A+ A ++ F +K A +C DLY+ T++ LN S+ + D WLS A+ N +TC+ ++ + SH L+S+ + N+LAI K R+ NG +S + L +G K DVVVAQDGSG+YKTI E V A + GS R VI+VK+GVY E V + N+M Sbjct: 8 CDETPHPGECK----TLLIKHKPIRSTT-QFLQVSVERTLDGAVKAKSDTYFLE-PQFG--SKQAWEECMDLYEQTIHRLNESVLCPKNVCSRSDVQAWLSTALTNLDTCQEEMSELGVSSHSLESITID-------VINTLAINK------------------RMEQNGKEFGISKITMKTLS---IGEKVDVVVAQDGSGDYKTIQEAVNGAGERLKGSPRYVIHVKQGVYEEYVNVGIKSNNIM 218
BLAST of FC878296 vs. ExPASy Swiss-Prot
Match: PME1_FICAW (Pectinesterase/pectinesterase inhibitor OS=Ficus awkeotsang PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.389e-19 Identity = 85/291 (29.21%), Postives = 134/291 (46.05%), Query Frame = 1 Query: 58 KLVLIQLFIHFL-IFSLNFAHGELITS---CSQTPYPEIC----NHYTATNFLSNLELDQTQFSFRDLNLKVTIDQAIHAHKLISTMDLSSFNKLAKLALVDCKDLYD-------DTVNHL-NRSMSSSNPIDSVTWLSAAIANQETCKNGF----TDFN---LHSHLQSLPFMSGNFSKLLSNSLAITKSTVSSSSIPYAYKRNGGRRLLVNGFPTWVSAADRRLLQSSGVGPKADVVVAQDGSGNYKTISEGVAAAVKLGGGSKRVVIYVKRGVYRENVEIKRSMKNLM 861 K+ L I F + S F+ EL C Q+ E C + T N + L ++ ++ + A A + I+ N + AL+DC +L D D+++ L ++++++ + D WLS + N TC +G TD+ + SHL L + S + +L KS V + FPTWV+A DRRLLQ+ G + D+VVA+DGSG+Y+T++E VAA KRV++ V+ G+Y ENV+ KN+M Sbjct: 18 KITFFLLVISFAALVSTGFSSPELSLHHKICDQSVNKESCLAMISEVTGLNMADHRNLLKSFLEKTTPRIQKAFETANDASRRIN-------NPQERTALLDCAELMDLSKERVVDSISILFHQNLTTRSHEDLHVWLSGVLTNHVTCLDGLEEGSTDYIKTLMESHLNEL-ILRARTSLAIFVTLFPAKSNVIEP--------------VTGNFPTWVTAGDRRLLQTLGKDIEPDIVVAKDGSGDYETLNEAVAAIP--DNSKKRVIVLVRTGIYEENVDFGYQKKNVM 284
BLAST of FC878296 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 2.389e-19 Identity = 67/204 (32.84%), Postives = 112/204 (54.90%), Query Frame = 1 Query: 280 LISTMDLSSFNKLAKLALVDCKDLYDDTVNHLNRSMSS----SNPIDSV----TWLSAAIANQETCKNGFTDFNLHSHLQSLPFMSGNFSKLLSNSLAITKSTVSSSSIPYAYKRNGGRRLLVNGFPTWVSAADRRLLQSSGVGPK--ADVVVAQDGSGNYKTISEGVAAAVKLGGGSKRVVIYVKRGVYRENVEIKRSMKNLM 861 ++S + S K DC+++ D + + + SM + ++S TWLS+ + N TC +D +++S P + S+ +LAI S + + R+ + ++ N FP+W++A DR+LL+SS K A+VVVA+DG+G +KT++E VAAA + + R VIYVK+GVY+E ++I + KNLM Sbjct: 106 MVSEARIRSNGVRDKAGFADCEEMMDVSKDRMMSSMEELRGGNYNLESYSNVHTWLSSVLTNYMTCLESISDVSVNSKQIVKPQLEDLVSRARV-ALAIFVSVLPA--------RDDLKMIISNRFPSWLTALDRKLLESSPKTLKVTANVVVAKDGTGKFKTVNEAVAAAPE--NSNTRYVIYVKKGVYKETIDIGKKKKNLM 298
BLAST of FC878296 vs. ExPASy Swiss-Prot
Match: PME1_SOLLC (Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9 PE=1 SV=5) HSP 1 Score: 95.1301 bits (235), Expect = 5.323e-19 Identity = 80/280 (28.57%), Postives = 132/280 (47.14%), Query Frame = 1 Query: 67 LIQLFIHFLI---FSLNFAHGELITSCSQTPYPEICNHYTATNFLSNLELDQTQFSFRDLNLKVTID---QAIHAHKLISTMDLSSFNKLAKLALVDCKDLYDDTVNHLNRSM------SSSNPIDSVTWLSAAIANQETCKNGFTDFNLHSHLQSLPFMSGNFSKLLSNS---LAITKSTVSSSSIPYAYKRNGGRRLLVNGFPTWVSAADRRLLQSSGVGPKADVVVAQDGSGNYKTISEGVAAAVKLGGGSKRVVIYVKRGVYRENVEIKRSMKNLM 861 +I LF+ + + + H L C ++C Y + + +SN E+ T+ + +K ++ Q +A ++ M + AL DC +L D +V+ + S+ S S ++ +WLS + N TC + F N +L+S + LA+ S + + ++ P+WVS+ DR+L++SSG A+ VVAQDG+G+Y+T++E VAAA R VIYVKRG Y+ENVE+ + NLM Sbjct: 27 VITLFVALFLVAPYQVEIKHSNL---CKTAQDSQLCLSYVS-DLISN-EIVTTESDGHSILMKFLVNYVHQMNNAIPVVRKMKNQINDIRQHGALTDCLELLDQSVDFASDSIAAIDKRSRSEHANAQSWLSGVLTNHVTCLDELDSFT------KAMINGTNLEELISRAKVALAMLASLTTQDEDVFM--------TVLGKMPSWVSSMDRKLMESSGKDIIANAVVAQDGTGDYQTLAEAVAAAP--DKSKTRYVIYVKRGTYKENVEVASNKMNLM 285
BLAST of FC878296 vs. ExPASy Swiss-Prot
Match: PME3_SOLLC (Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.186e-18 Identity = 63/184 (34.24%), Postives = 97/184 (52.72%), Query Frame = 1 Query: 328 ALVDCKDLYDDTVNHLNRSM------SSSNPIDSVTWLSAAIANQETCKNGFTDFNLHSHLQSLPFMSGNFSKLLSNSLAITKSTVSSSSIPYAYKRNGGRRLLVNGFPTWVSAADRRLLQSSGVGPKADVVVAQDGSGNYKTISEGVAAAVKLGGGSKRVVIYVKRGVYRENVEIKRSMKNLM 861 AL DC +L D +V+ ++ S+ S S ++ +WLS + N TC + T F+L + +G L + + ++S + P G + P WVS+ DR+L++SSG A+ VVAQDG+G+Y+T++E VAAA R VIYVK G+Y+ENV + + NLM Sbjct: 114 ALTDCLELLDQSVDLVSDSIAAIDKRSRSEHANAQSWLSGVLTNHVTCLDELTSFSLSTK-------NGTVLDELITRAKVALAMLASVTTPNDEVLRQG----LGKMPYWVSSRDRKLMESSGKDIIANRVVAQDGTGDYQTLAEAVAAAP--DKNKTRYVIYVKMGIYKENVVVTKKKMNLM 284
BLAST of FC878296 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.549e-18 Identity = 87/275 (31.64%), Postives = 131/275 (47.64%), Query Frame = 1 Query: 91 LIFSLNFAHGELITSCSQTPYPEICNHYTATNFLSNLELDQTQFSFRDLNLKVT--IDQAIHAHKLISTMDLSSFNKLAKLALVDCKDLYDDTVNHLNRSMSS----SNPIDSVTWL-SAAIANQETCKNGFT----DFNLHSH-------LQSLPFMSGNFSKLLSNSLAITKSTVSSSSIPYAYKRNGGRRLLVNGFPTWVSAADRRLLQSSGVGPKADVVVAQDGSGNYKTISEGVAAAVKLGGGSKRVVIYVKRGVYRENVEIKRSMKNLM 861 +I SL F L+ S + +T+++ ++ L + + ++NL + D +S DL +F+ DC +L DDTV L ++S S + +V L SAA+ N TC +GF D NL+++ +SL N S +S+SLA+ ++ IP K + G FP WVS +DR LLQ K ++VVAQ+G+GNY TI E ++AA R VIY+K G Y EN+EI R +M Sbjct: 8 IILSLTF----LLLFLSTVFSSHVTQRFTSSDDITELVVTALNQTISNVNLSSSNFSDLLQRLGSNLSHRDLCAFD--------DCLELLDDTVFDLTTAISKLRSHSPELHNVKMLLSAAMTNTRTCLDGFASSDNDENLNNNDNKTYGVAESLKESLFNISSHVSDSLAMLENI--PGHIPGKVKEDVG-------FPMWVSGSDRNLLQDPVDETKVNLVVAQNGTGNYTTIGEAISAAP--NSSETRFVIYIKCGEYFENIEIPREKTMIM 259 The following BLAST results are available for this feature:
BLAST of FC878296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878296 ID=FC878296; Name=FC878296; organism=Citrus clementina; type=EST; length=862bpback to top |