FC878298

Overview
NameFC878298
Unique NameFC878298
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length837
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878298 vs. ExPASy Swiss-Prot
Match: CDC2_CARAU (Cell division control protein 2 homolog OS=Carassius auratus GN=cdc2 PE=2 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 4.381e-79
Identity = 142/205 (69.27%), Postives = 169/205 (82.44%), Query Frame = 2
Query:  224 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRALF 835
            MD Y K+EKIGEGTYGVVYK RN  T + +A+KKIRLE E+EGVPSTA+REISLLKE+QH N+VRL DV+  E KLYLVFE+L +DLKK++DS P     DP L+K++LYQIL GI +CH  RVLHRDLKPQNLLID +   +KLADFGLARAFG+PVR +THEVVTLWYRAPE+LLG+  YSTPVDVWS+G IFAE+  ++ LF
Sbjct:    1 MDDYLKIEKIGEGTYGVVYKGRNKTTGQVVAMKKIRLESEEEGVPSTAVREISLLKELQHPNVVRLLDVLMQESKLYLVFEFLSMDLKKYLDSIPSGQFMDPMLVKSYLYQILEGILFCHCRRVLHRDLKPQNLLIDNK-GVIKLADFGLARAFGVPVRVYTHEVVTLWYRAPEVLLGASRYSTPVDVWSIGTIFAELATKKPLF 204          
BLAST of FC878298 vs. ExPASy Swiss-Prot
Match: CDK3_MOUSE (Cell division protein kinase 3 OS=Mus musculus GN=Cdk3 PE=1 SV=2)

HSP 1 Score: 291.582 bits (745), Expect = 3.709e-78
Identity = 143/204 (70.10%), Postives = 174/204 (85.29%), Query Frame = 2
Query:  224 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRALF 835
            MD ++KVEKIGEGTYGVVYKARN VT + +ALKKIRL+ E EGVPSTA+REISLLKE++H NI++L DVVH EKKLY+VFE+L  DLK+HMDS P       ++K++L Q+L G+++CHSHRV+HRDLKPQNLL+D    A+KLADFGLARAFG+P+RT+THEVVTLWYRAPEILLGS+ YST VD+ S+GCIFAEMV  +ALF
Sbjct:    1 MDVFQKVEKIGEGTYGVVYKARNKVTGQLVALKKIRLDLEAEGVPSTAVREISLLKELKHPNIIKLLDVVHREKKLYMVFEFLTQDLKRHMDSSPTSELPLPVVKSYLAQLLEGVSFCHSHRVIHRDLKPQNLLLD-GLGAIKLADFGLARAFGVPLRTYTHEVVTLWYRAPEILLGSKFYSTAVDI-SIGCIFAEMVTGKALF 202          
BLAST of FC878298 vs. ExPASy Swiss-Prot
Match: CDC2H_THEPA (Cell division control protein 2 homolog OS=Theileria parva GN=CRK2 PE=3 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 4.844e-78
Identity = 147/204 (72.06%), Postives = 171/204 (83.82%), Query Frame = 2
Query:  224 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRALF 835
            M +Y K+EKIGEGTYGVVYKA+N    E  ALKKIR+E+EDEG+PSTAIREISLLKE+ H NIV L+DV+HSEK L LVFEYLD DLKK +D+C D   +P   K+FLYQILRGI+YCH HR+LHRDLKPQNLLI+R    LKLADFGLARAF IPVR++THEVVTLWYRAP++L+GS+ YST VD+WSVGCIFAEM+N   LF
Sbjct:    1 MRRYHKMEKIGEGTYGVVYKAQNN-HGEICALKKIRVEEEDEGIPSTAIREISLLKELHHPNIVWLRDVIHSEKCLTLVFEYLDQDLKKLLDAC-DGGLEPTTAKSFLYQILRGISYCHDHRILHRDLKPQNLLINRE-GVLKLADFGLARAFAIPVRSYTHEVVTLWYRAPDVLMGSKKYSTAVDIWSVGCIFAEMINGVPLF 201          
BLAST of FC878298 vs. ExPASy Swiss-Prot
Match: CDC2H_THEAN (Cell division control protein 2 homolog OS=Theileria annulata GN=CRK2 PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 4.844e-78
Identity = 147/204 (72.06%), Postives = 171/204 (83.82%), Query Frame = 2
Query:  224 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRALF 835
            M +Y K+EKIGEGTYGVVYKA+N    E  ALKKIR+E+EDEG+PSTAIREISLLKE+ H NIV L+DV+HSEK L LVFEYLD DLKK +D+C D   +P   K+FLYQILRGI+YCH HR+LHRDLKPQNLLI+R    LKLADFGLARAF IPVR++THEVVTLWYRAP++L+GS+ YST VD+WSVGCIFAEM+N   LF
Sbjct:    1 MRRYHKMEKIGEGTYGVVYKAQNN-HGEICALKKIRVEEEDEGIPSTAIREISLLKELHHPNIVWLRDVIHSEKCLTLVFEYLDQDLKKLLDAC-DGGLEPTTAKSFLYQILRGISYCHDHRILHRDLKPQNLLINRE-GVLKLADFGLARAFAIPVRSYTHEVVTLWYRAPDVLMGSKKYSTAVDIWSVGCIFAEMINGVPLF 201          
BLAST of FC878298 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAKH (Cell division control protein 2 homolog OS=Plasmodium knowlesi (strain H) GN=CRK2 PE=3 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 8.263e-78
Identity = 145/204 (71.08%), Postives = 172/204 (84.31%), Query Frame = 2
Query:  224 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRALF 835
            M++Y  +EKIGEGTYGVVYKA+N    ET ALKKIRLE+EDEG+PSTAIREIS+LKE++H NIV+L DV+H++K+L LVFE+LD DLKK +D C D   +    K+FL Q+L GIAYCH HRVLHRDLKPQNLLI+R    LK+ADFGLARAFGIPVR +THEVVTLWYRAP+IL+GS+ YSTP+D+WSVGCIFAEMVN R LF
Sbjct:    1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTAIREISILKELKHSNIVKLYDVIHTKKRLILVFEHLDQDLKKLLDVC-DGGLESVTAKSFLLQLLSGIAYCHEHRVLHRDLKPQNLLINRE-GELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDILMGSKKYSTPIDIWSVGCIFAEMVNGRPLF 201          
BLAST of FC878298 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAVI (Cell division control protein 2 homolog OS=Plasmodium vivax GN=CRK2 PE=3 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.409e-77
Identity = 145/204 (71.08%), Postives = 172/204 (84.31%), Query Frame = 2
Query:  224 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRALF 835
            M++Y  +EKIGEGTYGVVYKA+N    ET ALKKIRLE+EDEG+PSTAIREIS+LKE++H NIV+L DV+H++K+L LVFE+LD DLKK +D C D   +    K+FL Q+L GIAYCH HRVLHRDLKPQNLLI+R    LK+ADFGLARAFGIPVR +THEVVTLWYRAP+IL+GS+ YSTP+D+WSVGCIFAEMVN R LF
Sbjct:    1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTAIREISILKELKHSNIVKLYDVIHTKKRLILVFEHLDQDLKKLLDVC-DGGLESVTAKSFLLQLLSGIAYCHEHRVLHRDLKPQNLLINRE-GELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDILMGSKKYSTPIDMWSVGCIFAEMVNGRPLF 201          
BLAST of FC878298 vs. ExPASy Swiss-Prot
Match: CDC2A_XENLA (Cell division control protein 2-A OS=Xenopus laevis GN=cdc2-A PE=1 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 2.404e-77
Identity = 141/205 (68.78%), Postives = 170/205 (82.93%), Query Frame = 2
Query:  224 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFAN-DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRALF 835
            MD+Y K+EKIGEGTYGVVYK R+  T + +A+KKIRLE E+EGVPSTAIREISLLKE+QH NIV L DV+  + +LYL+FE+L +DLKK++DS P     D  L+K++LYQIL+GI +CHS RVLHRDLKPQNLLID +   +KLADFGLARAFGIPVR +THEVVTLWYRAPE+LLGS  YSTPVDVWS+G IFAE+  ++ LF
Sbjct:    1 MDEYTKIEKIGEGTYGVVYKGRHKATGQVVAMKKIRLENEEEGVPSTAIREISLLKELQHPNIVCLLDVLMQDSRLYLIFEFLSMDLKKYLDSIPSGQYIDTMLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDSK-GVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSVRYSTPVDVWSIGTIFAEIATKKPLF 204          
BLAST of FC878298 vs. ExPASy Swiss-Prot
Match: CDK2_MOUSE (Cell division protein kinase 2 OS=Mus musculus GN=Cdk2 PE=1 SV=2)

HSP 1 Score: 288.5 bits (737), Expect = 3.140e-77
Identity = 140/197 (71.07%), Postives = 169/197 (85.79%), Query Frame = 2
Query:  224 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 814
            M+ ++KVEKIGEGTYGVVYKA+N +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H NIV+L DV+H+E KLYLVFE+L  DLKK MD+         LIK++L+Q+L+G+A+CHSHRVLHRDLKPQNLLI+    ++KLADFGLARAFG+PVRT+THEVVTLWYRAPEILLG ++YST VD+WS+GCIFAEM
Sbjct:    1 MENFQKVEKIGEGTYGVVYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAE-GSIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196          
BLAST of FC878298 vs. ExPASy Swiss-Prot
Match: CDC2_SCHPO (Cell division control protein 2 OS=Schizosaccharomyces pombe GN=cdc2 PE=1 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 3.140e-77
Identity = 139/211 (65.88%), Postives = 172/211 (81.52%), Query Frame = 2
Query:  224 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ----HGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFAN---DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRALF 835
            M+ Y+KVEKIGEGTYGVVYKAR+ ++   +A+KKIRLE E EGVPSTAIREISLLKE+       N VRL D++H+E KLYLVFE+LD+DLKK+MD   +      DPRL++ F YQ++ G+ +CHS R++HRDLKPQNLLID+  N LKLADFGLAR+FG+P+R +THE+VTLWYRAPE+LLGSRHYST VD+WSVGCIFAEM+ +  LF
Sbjct:    1 MENYQKVEKIGEGTYGVVYKARHKLSGRIVAMKKIRLEDESEGVPSTAIREISLLKEVNDENNRSNCVRLLDILHAESKLYLVFEFLDMDLKKYMDRISETGATSLDPRLVQKFTYQLVNGVNFCHSRRIIHRDLKPQNLLIDKEGN-LKLADFGLARSFGVPLRNYTHEIVTLWYRAPEVLLGSRHYSTGVDIWSVGCIFAEMIRRSPLF 210          
BLAST of FC878298 vs. ExPASy Swiss-Prot
Match: CDC2H_PLACH (Cell division control protein 2 homolog OS=Plasmodium chabaudi GN=CRK2 PE=3 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 4.101e-77
Identity = 143/204 (70.10%), Postives = 171/204 (83.82%), Query Frame = 2
Query:  224 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRALF 835
            M++Y  +EKIGEGTYGVVYKA+N    E+ ALKKIRLE+EDEG+PSTAIREIS+LKE++H NIV+L DV+H++K+L LVFE+LD DLKK +D C D   +    K+FL Q+L GIAYCH HRVLHRDLKPQNLLI+R    LK+ADFGLARAFGIP R +THEVVTLWYRAP+IL+GS+ YSTP+D+WSVGCIFAEMVN R LF
Sbjct:    1 MEKYHGLEKIGEGTYGVVYKAQNS-DGESFALKKIRLEKEDEGIPSTAIREISILKELRHSNIVKLYDVIHAKKRLILVFEHLDQDLKKLIDVC-DGGLESVTAKSFLLQLLNGIAYCHEHRVLHRDLKPQNLLINRE-GELKIADFGLARAFGIPARRYTHEVVTLWYRAPDILMGSKKYSTPIDIWSVGCIFAEMVNGRPLF 201          
The following BLAST results are available for this feature:
BLAST of FC878298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC2_CARAU4.381e-7969.27Cell division control protein 2 homolog OS=Carassi... [more]
CDK3_MOUSE3.709e-7870.10Cell division protein kinase 3 OS=Mus musculus GN=... [more]
CDC2H_THEPA4.844e-7872.06Cell division control protein 2 homolog OS=Theiler... [more]
CDC2H_THEAN4.844e-7872.06Cell division control protein 2 homolog OS=Theiler... [more]
CDC2H_PLAKH8.263e-7871.08Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2H_PLAVI1.409e-7771.08Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2A_XENLA2.404e-7768.78Cell division control protein 2-A OS=Xenopus laevi... [more]
CDK2_MOUSE3.140e-7771.07Cell division protein kinase 2 OS=Mus musculus GN=... [more]
CDC2_SCHPO3.140e-7765.88Cell division control protein 2 OS=Schizosaccharom... [more]
CDC2H_PLACH4.101e-7770.10Cell division control protein 2 homolog OS=Plasmod... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA58BH02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA58BH02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878298 ID=FC878298; Name=FC878298; organism=Citrus clementina; type=EST; length=837bp
TGCCTCCAATCACCTCACTCTTACTCCGGCGATCTCCCCCGTCGGCTTGG
ATCGTCCTCGCGTCTGTTACTGTATTATGCATTTGTATTTTTCTCTTTCG
TAAGCGGTTAATTTTTTCTTCATAACACACTGCCGCCACCTACGCCGTCG
ATTCGTGCCGTTCTTGTCGCCGTCCGTCGGTAGCAAGGACGCCTCGTTCG
TGTAGCTGTTACATTAAGACTGAATGGACCAGTATGAAAAGGTTGAGAAG
ATTGGTGAAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCAC
GAATGAGACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAG
GTGTGCCTAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAG
CATGGGAACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACT
TTATCTGGTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATT
CTTGCCCAGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTAT
CAAATTCTACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCG
AGATTTGAAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAA
AGCTTGCAGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTAGGACA
TTTACACATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACT
AGGATCTCGCCATTACTCTACTCCAGTTGATGTGTGGTCGGTGGGATGTA
TATTTGCTGAGATGGTGAACCAGCGGGCATTGTTTCC
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