FC878298

Overview
NameFC878298
Unique NameFC878298
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length837
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12114 contig Ccv1_Contig12114:88..924. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878298 vs. ExPASy Swiss-Prot
Match: CDC2H_PLABA (Cell division control protein 2 homolog OS=Plasmodium berghei (strain Anka) GN=CRK2 PE=2 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 4.101e-77
Identity = 143/204 (70.10%), Postives = 171/204 (83.82%), Query Frame = 2
Query:  224 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRALF 835
            M++Y  +EKIGEGTYGVVYKA+N    E+ ALKKIRLE+EDEG+PSTAIREIS+LKE++H NIV+L DV+H++K+L LVFE+LD DLKK +D C D   +    K+FL Q+L GIAYCH HRVLHRDLKPQNLLI+R    LK+ADFGLARAFGIP R +THEVVTLWYRAP+IL+GS+ YSTP+D+WSVGCIFAEMVN R LF
Sbjct:    1 MEKYHGLEKIGEGTYGVVYKAQNS-DGESFALKKIRLEKEDEGIPSTAIREISILKELRHSNIVKLYDVIHAKKRLILVFEHLDQDLKKLIDVC-DGGLESVTAKSFLLQLLNGIAYCHEHRVLHRDLKPQNLLINRE-GELKIADFGLARAFGIPARRYTHEVVTLWYRAPDILMGSKKYSTPIDIWSVGCIFAEMVNGRPLF 201          
BLAST of FC878298 vs. ExPASy Swiss-Prot
Match: CDC2_BOVIN (Cell division control protein 2 homolog OS=Bos taurus GN=CDC2 PE=2 SV=2)

HSP 1 Score: 286.96 bits (733), Expect = 9.136e-77
Identity = 137/205 (66.83%), Postives = 170/205 (82.93%), Query Frame = 2
Query:  224 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRALF 835
            M+ Y K+EKIGEGTYGVVYK R+  T + +A+KKIRLE E+EGVPSTAIREISLLKE++H NIV LQDV+  + +LYL+FE+L +DLKK++DS P     D  L+K++LYQIL+GI +CHS RVLHRDLKPQNLLID +   +KLADFGLARAFGIP+R +THEVVTLWYR+PE+LLGS  YSTPVD+WS+G IFAE+  ++ LF
Sbjct:    1 MEDYTKIEKIGEGTYGVVYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQDSRLYLIFEFLSMDLKKYLDSIPPGQFMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDK-GTIKLADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLF 204          
BLAST of FC878298 vs. ExPASy Swiss-Prot
Match: CDC2B_XENLA (Cell division control protein 2-B OS=Xenopus laevis GN=cdc2-B PE=1 SV=2)

HSP 1 Score: 286.574 bits (732), Expect = 1.193e-76
Identity = 141/205 (68.78%), Postives = 169/205 (82.44%), Query Frame = 2
Query:  224 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFAN-DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRALF 835
            MD+Y K+EKIGEGTYGVVYK R+  T + +A+KKIRLE E+EGVPSTAIREISLLKE+QH NIV L DV+  + +LYL+FE+L +DLKK++DS P     D  L+K++LYQIL+GI +CHS RVLHRDLKPQNLLID +   +KLADFGLARAFGIPVR +THEVVTLWYRA E+LLGS  YSTPVDVWSVG IFAE+  ++ LF
Sbjct:    1 MDEYTKIEKIGEGTYGVVYKGRHKATGQVVAMKKIRLENEEEGVPSTAIREISLLKELQHPNIVCLLDVLMQDSRLYLIFEFLSMDLKKYLDSIPSGQYIDTMLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDNK-GVIKLADFGLARAFGIPVRVYTHEVVTLWYRASEVLLGSVRYSTPVDVWSVGTIFAEIATKKPLF 204          
BLAST of FC878298 vs. ExPASy Swiss-Prot
Match: CDC2_RAT (Cell division control protein 2 homolog OS=Rattus norvegicus GN=Cdc2 PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 2.035e-76
Identity = 137/205 (66.83%), Postives = 170/205 (82.93%), Query Frame = 2
Query:  224 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRALF 835
            M+ Y K+EKIGEGTYGVVYK R+  T + +A+KKIRLE E+EGVPSTAIREISLLKE++H NIV LQDV+  + +LYL+FE+L +DLKK++DS P     D  L+K++LYQIL+GI +CHS RVLHRDLKPQNLLID +   +KLADFGLARAFGIP+R +THEVVTLWYR+PE+LLGS  YSTPVD+WS+G IFAE+  ++ LF
Sbjct:    1 MEDYIKIEKIGEGTYGVVYKGRHRTTGQIVAMKKIRLESEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQDSRLYLIFEFLSMDLKKYLDSIPPGQFMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDK-GTIKLADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLF 204          
BLAST of FC878298 vs. ExPASy Swiss-Prot
Match: CDC2_DICDI (Cell division control protein 2 homolog OS=Dictyostelium discoideum GN=cdk1 PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 2.035e-76
Identity = 139/204 (68.14%), Postives = 170/204 (83.33%), Query Frame = 2
Query:  224 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRALF 835
            + +Y+K+EK+GEGTYG VYKA+   T   +ALKKIRLE  D+GVPSTA+REISLLKE+ H N+V L DV+H + +LYLVFEYLD DLKK+MDS P     P+LIK++LYQ+L+G+AY H HR+LHRDLKPQNLLIDR+  ALKLADFGLARA  IPVR +THE+VTLWYRAPE+LLGS+ YS PVD+WSVGCIF EM+N++ LF
Sbjct:    7 LSRYQKLEKLGEGTYGKVYKAKEKATGRMVALKKIRLE--DDGVPSTALREISLLKEVPHPNVVSLFDVLHCQNRLYLVFEYLDQDLKKYMDSVPALC--PQLIKSYLYQLLKGLAYSHGHRILHRDLKPQNLLIDRQ-GALKLADFGLARAVSIPVRVYTHEIVTLWYRAPEVLLGSKSYSVPVDMWSVGCIFGEMLNKKPLF 205          
BLAST of FC878298 vs. ExPASy Swiss-Prot
Match: CDC28_CANAL (Cell division control protein 28 OS=Candida albicans GN=CDC28 PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 2.035e-76
Identity = 144/207 (69.57%), Postives = 170/207 (82.13%), Query Frame = 2
Query:  224 MDQYEKVEKIGEGTYGVVYKARNCV-TNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK-KLYLVFEYLDLDLKKHMDSCPDFAN-DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRALF 835
            +  Y++ EK+GEGTYGVVYKA +    N  +ALKKIRLE EDEGVPSTAIREISLLKEM+  NIVRL D++HS+  KLYLVFE+LDLDLKK+M+S P        +IK F+ Q++RGI +CHSHRVLHRDLKPQNLLID+  N LKLADFGLARAFG+P+R +THEVVTLWYRAPEILLG + YST VD+WSVGCIFAEM N++ LF
Sbjct:    4 LSDYQRQEKVGEGTYGVVYKALDTKHNNRVVALKKIRLESEDEGVPSTAIREISLLKEMKDDNIVRLYDIIHSDSHKLYLVFEFLDLDLKKYMESIPQGVGLGANMIKRFMNQLIRGIKHCHSHRVLHRDLKPQNLLIDKEGN-LKLADFGLARAFGVPLRAYTHEVVTLWYRAPEILLGGKQYSTGVDMWSVGCIFAEMCNRKPLF 209          
BLAST of FC878298 vs. ExPASy Swiss-Prot
Match: CDC2_PONAB (Cell division control protein 2 homolog OS=Pongo abelii GN=CDC2 PE=2 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 2.658e-76
Identity = 136/205 (66.34%), Postives = 169/205 (82.44%), Query Frame = 2
Query:  224 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRALF 835
            M+ Y K+EKIGEGTYGVVYK R+  T + + +KKIRLE E+EGVPSTAIREISLLKE++H NIV LQDV+  + +LYL+FE+L +DLKK++DS P     D  L+K++LYQIL+GI +CHS RVLHRDLKPQNLLID +   +KLADFGLARAFGIP+R +THEVVTLWYR+PE+LLGS  YSTPVD+WS+G IFAE+  ++ LF
Sbjct:    1 MEDYTKIEKIGEGTYGVVYKGRHKTTGQVVTMKKIRLESEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQDSRLYLIFEFLSMDLKKYLDSIPPGQYMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDK-GTIKLADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLF 204          
BLAST of FC878298 vs. ExPASy Swiss-Prot
Match: CDC2_MOUSE (Cell division control protein 2 homolog OS=Mus musculus GN=Cdc2 PE=1 SV=3)

HSP 1 Score: 285.419 bits (729), Expect = 2.658e-76
Identity = 137/205 (66.83%), Postives = 171/205 (83.41%), Query Frame = 2
Query:  224 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRALF 835
            M+ Y K+EKIGEGTYGVVYK R+ VT + +A+KKIRLE E+EGVPSTAIREISLLKE++H NIV LQDV+  + +LYL+FE+L +DLKK++DS P     D  L+K++L+QIL+GI +CHS RVLHRDLKPQNLLID +   +KLADFGLARAFGIP+R +THEVVTLWYR+PE+LLGS  YSTPVD+WS+G IFAE+  ++ LF
Sbjct:    1 MEDYIKIEKIGEGTYGVVYKGRHRVTGQIVAMKKIRLESEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQDSRLYLIFEFLSMDLKKYLDSIPPGQFMDSSLVKSYLHQILQGIVFCHSRRVLHRDLKPQNLLIDDK-GTIKLADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLF 204          
BLAST of FC878298 vs. ExPASy Swiss-Prot
Match: CDC2_ORYLU (Cell division control protein 2 homolog OS=Oryzias luzonensis GN=cdc2 PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.472e-76
Identity = 136/205 (66.34%), Postives = 168/205 (81.95%), Query Frame = 2
Query:  224 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRALF 835
            M+ Y K+EKIGEGTYGVVYK R+  T + +A+KKIRLE E+EGVPSTA+RE+SLL+E++H N+VRL DV+  E +LYL+FE+L +DLKK++DS P     DP L+K++LYQIL GI +CH  RVLHRDLKPQNLLID +   +KLADFGLARAFG+PVR +THEVVTLWYRAPE+LLGS  YSTPVDVWS G IFAE+  ++ LF
Sbjct:    1 MEDYVKIEKIGEGTYGVVYKGRHKSTGQVVAMKKIRLESEEEGVPSTAVREVSLLQELKHPNVVRLLDVLMQESRLYLIFEFLSMDLKKYLDSIPSGQYMDPMLVKSYLYQILEGIYFCHRRRVLHRDLKPQNLLIDNK-GVIKLADFGLARAFGVPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDVWSTGTIFAELATKKPLF 204          
BLAST of FC878298 vs. ExPASy Swiss-Prot
Match: CDC2_ORYLA (Cell division control protein 2 homolog OS=Oryzias latipes GN=cdc2 PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.472e-76
Identity = 136/205 (66.34%), Postives = 168/205 (81.95%), Query Frame = 2
Query:  224 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRALF 835
            M+ Y K+EKIGEGTYGVVYK R+  T + +A+KKIRLE E+EGVPSTA+RE+SLL+E++H N+VRL DV+  E +LYL+FE+L +DLKK++DS P     DP L+K++LYQIL GI +CH  RVLHRDLKPQNLLID +   +KLADFGLARAFG+PVR +THEVVTLWYRAPE+LLGS  YSTPVDVWS G IFAE+  ++ LF
Sbjct:    1 MEDYVKIEKIGEGTYGVVYKGRHKSTGQVVAMKKIRLESEEEGVPSTAVREVSLLQELKHPNVVRLLDVLMQESRLYLIFEFLSMDLKKYLDSIPSGQYMDPMLVKSYLYQILEGIYFCHRRRVLHRDLKPQNLLIDNK-GVIKLADFGLARAFGVPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDVWSTGTIFAELATKKPLF 204          
The following BLAST results are available for this feature:
BLAST of FC878298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC2H_PLABA4.101e-7770.10Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2_BOVIN9.136e-7766.83Cell division control protein 2 homolog OS=Bos tau... [more]
CDC2B_XENLA1.193e-7668.78Cell division control protein 2-B OS=Xenopus laevi... [more]
CDC2_RAT2.035e-7666.83Cell division control protein 2 homolog OS=Rattus ... [more]
CDC2_DICDI2.035e-7668.14Cell division control protein 2 homolog OS=Dictyos... [more]
CDC28_CANAL2.035e-7669.57Cell division control protein 28 OS=Candida albica... [more]
CDC2_PONAB2.658e-7666.34Cell division control protein 2 homolog OS=Pongo a... [more]
CDC2_MOUSE2.658e-7666.83Cell division control protein 2 homolog OS=Mus mus... [more]
CDC2_ORYLU3.472e-7666.34Cell division control protein 2 homolog OS=Oryzias... [more]
CDC2_ORYLA3.472e-7666.34Cell division control protein 2 homolog OS=Oryzias... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA58BH02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA58BH02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878298 ID=FC878298; Name=FC878298; organism=Citrus clementina; type=EST; length=837bp
TGCCTCCAATCACCTCACTCTTACTCCGGCGATCTCCCCCGTCGGCTTGG
ATCGTCCTCGCGTCTGTTACTGTATTATGCATTTGTATTTTTCTCTTTCG
TAAGCGGTTAATTTTTTCTTCATAACACACTGCCGCCACCTACGCCGTCG
ATTCGTGCCGTTCTTGTCGCCGTCCGTCGGTAGCAAGGACGCCTCGTTCG
TGTAGCTGTTACATTAAGACTGAATGGACCAGTATGAAAAGGTTGAGAAG
ATTGGTGAAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCAC
GAATGAGACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAG
GTGTGCCTAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAG
CATGGGAACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACT
TTATCTGGTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATT
CTTGCCCAGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTAT
CAAATTCTACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCG
AGATTTGAAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAA
AGCTTGCAGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTAGGACA
TTTACACATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACT
AGGATCTCGCCATTACTCTACTCCAGTTGATGTGTGGTCGGTGGGATGTA
TATTTGCTGAGATGGTGAACCAGCGGGCATTGTTTCC
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