FC878299
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: CATD_CLUHA (Cathepsin D OS=Clupea harengus GN=ctsd PE=1 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 8.518e-49 Identity = 91/209 (43.54%), Postives = 134/209 (64.11%), Query Frame = 1 Query: 235 AEAGHPVAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCG--SIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKE 855 + A P + N+++AQY+ EI +G P Q F VV DTGSSNLW+PS C IAC L G++FAI+YGSG++ GY+SQD+ IGDI ++ QLFGEA ++PG+AF +FDGILG+ Y ISV+ +PP F M+ Q +++ VF+FYL+ D E E + GG + +YTG+ +P+ R+AYW++ +D ++ G + Sbjct: 60 SNAPTPETLKNYMDAQYYGEIGLGTPVQMFTVVFDTGSSNLWLPSIHCSFTDIACLLHHKYNGAKSSTYVKNGTEFAIQYGSGSLSGYLSQDSCTIGDIVVEKQLFGEAIKQPGVAFIAAKFDGILGMAYPRISVDGVPPVFDMMMSQKKVEQNVFSFYLNRNPDTEPGGELLLGGTDPKYYTGDFNYVPVTRQAYWQIHMDGMSIGSQ 268
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: ASPR_CUCPE (Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 4.227e-48 Identity = 88/205 (42.93%), Postives = 131/205 (63.90%), Query Frame = 1 Query: 253 VAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKESAEF 867 VA+ N+L+AQY+ EIAIG PPQ+F V+ DTGSSNLW+ S+AC+ G+ +IRYG+GAV G+ S D V++GD+ +K Q+F EAT+EP L F +FDG+LGLG+ I+V P +Y+M++Q L+ EPVF+F+L+ ++E E +FGG++ HY G+ T +P+ +K YW+ D+ + E F Sbjct: 80 VALKNYLDAQYYGEIAIGTPPQKFTVIFDTGSSNLWVLCECLFSVACHFHARYKSSRSSSYKKNGTSASIRYGTGAVSGFFSYDNVKVGDLVVKEQVFIEATREPSLTFLVAKFDGLLGLGFQEIAVGNAVPVWYNMVEQGLVKEPVFSFWLNRNVEEEEGGEIVFGGVDPKHYRGKHTYVPVTQKGYWQFDMGDVLIDGEPTGF 284
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: ASPRX_ORYSJ (Aspartic proteinase OS=Oryza sativa subsp. japonica GN=RAP PE=2 SV=2) HSP 1 Score: 191.43 bits (485), Expect = 5.521e-48 Identity = 93/207 (44.93%), Postives = 129/207 (62.32%), Query Frame = 1 Query: 250 PVAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCG-SIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKESAEF 867 PV + ++LN QY+ I +G+PPQ F V+ DTGSSNLW+PS+ C SIACYL G I YGSGA+ G+ S+D V +GD+ +KNQ F EAT+E + F G+FDGILGLGY ISV K PP + SM +Q+LL + VF+F+L+ D + E +FGG++ HY G+ T +P+ RK YW+ ++ + S F Sbjct: 66 PVPLVDYLNTQYYGVIGLGSPPQNFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYNSKKSSSYKADGETCKITYGSGAISGFFSKDNVLVGDLVVKNQKFIEATRETSVTFIIGKFDGILGLGYPEISVGKAPPIWQSMQEQELLADDVFSFWLNRDPDASSGGELVFGGMDPKHYKGDHTYVPVSRKGYWQFNMGDLLIDGHSTGF 272
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: CATD_CHIHA (Cathepsin D OS=Chionodraco hamatus GN=ctsd PE=1 SV=2) HSP 1 Score: 189.889 bits (481), Expect = 1.606e-47 Identity = 91/209 (43.54%), Postives = 133/209 (63.64%), Query Frame = 1 Query: 235 AEAGHPVAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCG--SIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKE 855 + A P + N+L+AQY+ EI +G PPQ F VV DTGSSNLW+PS C IAC L G+ FAI+YGSG++ GY+SQDT IGD+ I +QLFGEA ++PG+AF +FDGILG+ Y ISV+ + P F +++ Q +++ VF+FYL+ D E E + GG + +YTG+ + + R+AYW++ +D++ G + Sbjct: 60 SNAPTPETLKNYLDAQYYGEIGLGTPPQPFTVVFDTGSSNLWVPSIHCSLLDIACLLHHKYNSGKSSTYVKNGTAFAIQYGSGSLSGYLSQDTCTIGDLAIDSQLFGEAIKQPGVAFIAAKFDGILGMAYPRISVDGVAPVFDNIMSQKKVEQNVFSFYLNRNPDTEPGGELLLGGTDPKYYTGDFNYVNVTRQAYWQIRVDSMAVGDQ 268
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: CATD_CHICK (Cathepsin D OS=Gallus gallus GN=CTSD PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 2.098e-47 Identity = 86/199 (43.22%), Postives = 134/199 (67.34%), Query Frame = 1 Query: 250 PVAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCG--SIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAI 840 P + N+++AQY+ EI IG PPQ+F VV DTGSSNLW+PS C IAC L G++FAI YG+G++ G++SQDTV +G++KIKNQ+FGEA ++PG+ F +FDGILG+ + ISV+K+ P F +++ Q L+++ +F+FYL+ + E + GG + +Y+G+ + + + RKAYW+V +D++ Sbjct: 67 PEILKNYMDAQYYGEIGIGTPPQKFTVVFDTGSSNLWVPSVHCHLLDIACLLHHKYDASKSSTYVENGTEFAIHYGTGSLSGFLSQDTVTLGNLKIKNQIFGEAVKQPGITFIAAKFDGILGMAFPRISVDKVTPFFDNVMQQKLIEKNIFSFYLNRDPTAQPGGELLLGGTDPKYYSGDFSWVNVTRKAYWQVHMDSV 265
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: CATD_RAT (Cathepsin D OS=Rattus norvegicus GN=Ctsd PE=1 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 7.972e-47 Identity = 93/207 (44.93%), Postives = 132/207 (63.77%), Query Frame = 1 Query: 259 VSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCG--SIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQI------GDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKE 855 + N+L+AQY+ EI IG PPQ F VV DTGSSNLW+PS C IAC++ G+ F I YGSG++ GY+SQDTV + G IK++ Q+FGEAT++PG+ F +FDGILG+GY ISVNK+ P F +++ Q L+++ +F+FYL+ + E + GG + +Y GEL+ L + RKAYW+V +D + G E Sbjct: 71 LKNYLDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWVHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCKSDLGGIKVEKQIFGEATKQPGVVFIAAKFDGILGMGYPFISVNKVLPVFDNLMKQKLVEKNIFSFYLNRDPTGQPGGELMLGGTDSRYYHGELSYLNVTRKAYWQVHMDQLEVGSE 277
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: CATD_HUMAN (Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 2.320e-46 Identity = 91/210 (43.33%), Postives = 129/210 (61.43%), Query Frame = 1 Query: 250 PVAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCG--SIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQI-----------GDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAI 840 P + N+++AQY+ EI IG PPQ F VV DTGSSNLW+PS C IAC++ G+ F I YGSG++ GY+SQDTV + G +K++ Q+FGEAT++PG+ F +FDGILG+ Y ISVN + P F +++ Q L+D+ +F+FYLS D + E + GG + +Y G L+ L + RKAYW+V LD + Sbjct: 68 PEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCQSASSASALGGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTDSKYYKGSLSYLNVTRKAYWQVHLDQV 277
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: CATD_MOUSE (Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 5.167e-46 Identity = 91/210 (43.33%), Postives = 131/210 (62.38%), Query Frame = 1 Query: 259 VSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCG--SIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIG---------DIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKE 855 + N+L+AQY+ +I IG PPQ F VV DTGSSNLW+PS C IAC++ G+ F I YGSG++ GY+SQDTV + IK++ Q+FGEAT++PG+ F +FDGILG+GY ISVN + P F +++ Q L+D+ +F+FYL+ + + E + GG + +Y GEL+ L + RKAYW+V +D + G E Sbjct: 71 LKNYLDAQYYGDIGIGTPPQCFTVVFDTGSSNLWVPSIHCKILDIACWVHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCKSDQSKARGIKVEKQIFGEATKQPGIVFVAAKFDGILGMGYPHISVNNVLPVFDNLMQQKLVDKNIFSFYLNRDPEGQPGGELMLGGTDSKYYHGELSYLNVTRKAYWQVHMDQLEVGNE 280
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: PEPA1_RABIT (Pepsin II-1 OS=Oryctolagus cuniculus PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.703e-44 Identity = 96/258 (37.21%), Postives = 142/258 (55.04%), Query Frame = 1 Query: 85 VHKMKLKKVPLSEQLEGANIGEHMQALGQKYMGVRPQKHADEMFKETSMHAEAGHPVAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKES 858 V K L+K + + L + H L KY E F S + + N+L+A+YF I+IG PPQEF V+ DTGSSNLW+PS+ C S+AC+L +I YG+G++ G + DTV++G+I+ NQ+FG + EPG+ F FDGILGL Y SIS + P F +M ++ L+ E +F+ YLS +K S +FGGI+ +YTG L +P+ + YW++ +D+IT E+ Sbjct: 23 VRKKSLRKNLIEKGLLQDYLKTHTPNLATKYF-------PKETFASVSTES-------LENYLDAEYFGTISIGTPPQEFTVIFDTGSSNLWVPSTYCSSLACFLHKRFNPDDSSTFQATSETLSITYGTGSMTGILGYDTVKVGNIEDTNQIFGLSKTEPGITFLVAPFDGILGLAYPSISASDATPVFDNMWNEGLVSEDLFSVYLSSNGEK--GSMVMFGGIDSSYYTGSLNWVPVSHEGYWQITMDSITINGET 264
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: NAPSA_HUMAN (Napsin-A OS=Homo sapiens GN=NAPSA PE=1 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.837e-44 Identity = 87/201 (43.28%), Postives = 123/201 (61.19%), Query Frame = 1 Query: 253 VAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCG--SIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFG 849 V +SN+ + QYF EI +G PPQ F V DTGSSNLW+PS C S+ C+L G+ FAI+YG+G V+G +S+D + IG IK + +FGEA EP L FAF FDGILGLG+ +SV + PP +++Q LLD+PVF+FYL+ ++ E + GG + HY LT +P+ AYW++ ++ + G Sbjct: 68 VPLSNYRDVQYFGEIGLGTPPQNFTVAFDTGSSNLWVPSRRCHFFSVPCWLHHRFDPKASSSFQANGTKFAIQYGTGRVDGILSEDKLTIGGIKGASVIFGEALWEPSLVFAFAHFDGILGLGFPILSVEGVRPPMDVLVEQGLLDKPVFSFYLNRDPEEPDGGELVLGGSDPAHYIPPLTFVPVTVPAYWQIHMERVKVG 268 The following BLAST results are available for this feature:
BLAST of FC878299 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 114
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878299 ID=FC878299; Name=FC878299; organism=Citrus clementina; type=EST; length=867bpback to top |