FC878299

Overview
NameFC878299
Unique NameFC878299
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length867
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7104 contig Ccv1_Contig7104:5..871. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: CTSD_ASPFU (Aspartic-type endopeptidase ctsD OS=Aspergillus fumigatus GN=ctsD PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.047e-15
Identity = 49/172 (28.49%), Postives = 81/172 (47.09%), Query Frame = 1
Query:  271 LNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGEL 786
            L+  YF+ + +G+  Q+  +VLDTG  N W+  SDC ++AC                   ++A+ YG+G V G +  D++ +  + + N  FG A +     F     DGILGLG  + S    P    ++  Q LL   +  F  S  +D   +  A FG ++   +TG++
Sbjct:  102 LDYSYFATVRVGSQGQQMWLVLDTGGPNTWVFGSDCTTVACQRHETFGEAASKSLKLLPLNWAVGYGTGLVSGVLGTDSLSLAGLDV-NMTFGLA-KNASTDFESYPVDGILGLGRSANSNFNTPSFMETVATQRLLKSNIIGFSFSRNSDGARDGAANFGDLDTTRFTGDI 271          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: CARP5_CANAL (Candidapepsin-5 OS=Candida albicans GN=SAP5 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.373e-14
Identity = 63/214 (29.44%), Postives = 104/214 (48.60%), Query Frame = 1
Query:  250 PVAVSNFLNA-QYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIA---------CYLXXXXXXXXXXXXXXXGSDFAIRYGSGA-VEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDS-----ISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAES-EAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAI 840
            PVAV+    A  Y ++I +G+  Q+  V++DTGSS+LWIP S+   I          C                  + F I+YG G+  +G + +DTV IG + +++QLF          ++     GILG+G+ S        + +P    S+ +Q ++ +  ++ YL   N  EA + + IFGGI+K  Y+G L  LP+  +    V L ++
Sbjct:   78 PVAVTLHNEAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLNTRFDIKYGDGSYAKGKLYKDTVGIGGVSVRDQLFAN-------VWSTSARKGILGIGFQSGEATEFDYDNLP---ISLRNQGIIGKAAYSLYL---NSAEASTGQIIFGGIDKAKYSGSLVDLPITSEKKLTVGLRSV 278          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: CARP4_CANAL (Candidapepsin-4 OS=Candida albicans GN=SAP4 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.373e-14
Identity = 58/199 (29.15%), Postives = 94/199 (47.24%), Query Frame = 1
Query:  283 YFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIA---------CYLXXXXXXXXXXXXXXXGSDFAIRYGSGAV-EGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPF--YSMIDQDLLDEPVFAFYLSDTNDKEAES-EAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAI 840
            Y ++I IG+  Q+  V++DTGSS+LW+P S+   I          C                  + F I+Y  G+V +G + QDTV IG + +++QLF           +     GILG+G+ S    + P      ++  Q ++ +  ++ +L   N  EA S + IFGGI+K  Y+G L  LP+       V L ++
Sbjct:   89 YSADITIGSNNQKLSVIVDTGSSDLWVPDSNAVCIPKWPGDRGDFCKNNGSYSPAASSTSKNLNTPFEIKYADGSVAQGNLYQDTVGIGGVSVRDQLFANVR-------STSAHKGILGIGFQSNEATRTPYDNLPITLKKQGIISKNAYSLFL---NSPEASSGQIIFGGIDKAKYSGSLVDLPITSDRTLSVGLRSV 277          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: CARP_RHIMI (Mucorpepsin OS=Rhizomucor miehei PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.588e-13
Identity = 68/278 (24.46%), Postives = 113/278 (40.65%), Query Frame = 1
Query:   91 KMKLKKVPL---SEQLEGANIGEHMQALGQKYMGVRPQKHADEMFKETSMHAEAGHPVAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDC-GSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLF-------GEATQEPGLAFAFGRFDGILGLGY-DSISVNKIPPPFYSMI-----DQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRK----AYWEVDLDAITFGKESA 861
            K KL  +PL   S +      G+  Q L +K  G++P       F E +       P    +F   +Y   ++IG P Q+F ++ DTGSS+ W+P   C  S  C                   +  I YG+G   G   +D++ IGDI +  Q+        G   ++   A  F   DG+ G  Y D+ ++       Y+ +      Q L+  P+F+ Y+   N      E +FGG+N     G++    +  +     +W+  +  IT    +A
Sbjct:   32 KDKLLALPLTSVSRKFSQTKFGQ--QQLAEKLAGLKP-------FSEAAADGSVDTP-GYYDFDLEEYAIPVSIGTPGQDFLLLFDTGSSDTWVPHKGCTKSEGCVGSRFFDPSASSTFKATNYNLNITYGTGGANGLYFEDSIAIGDITVTKQILAYVDNVRGPTAEQSPNADIF--LDGLFGAAYPDNTAMEAEYGSTYNTVHVNLYKQGLISSPLFSVYM---NTNSGTGEVVFGGVNNTLLGGDIAYTDVMSRYGGYYFWDAPVTGITVDGSAA 294          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: CARP_CANTR (Candidapepsin OS=Candida tropicalis GN=SAPT1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.381e-13
Identity = 59/201 (29.35%), Postives = 89/201 (44.28%), Query Frame = 1
Query:  283 YFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIACYLXXXXXXXXXXXXXXXGS---------DFAIRYGS-GAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVF--AFYLSDTNDKEAES-EAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITF 846
            Y ++I +G+  Q+  VV+DTGSS+LW+  +D      Y                 S         DF+I YG   + +G   +DTV  G I IKNQ F + T             GI+G+G+ ++         YS +   L  + +     Y  D N ++A + + IFGG++   YTG LT LP+       V L +I F
Sbjct:   74 YAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLNQDFSIEYGDLTSSQGSFYKDTVGFGGISIKNQQFADVT-------TTSVDQGIMGIGFTAVEAGY---NLYSNVPVTLKKQGIINKNAYSCDLNSEDASTGKIIFGGVDNAKYTGTLTALPVTSSVELRVHLGSINF 264          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: CARP1_CANAL (Candidapepsin-1 OS=Candida albicans GN=SAP1 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.767e-13
Identity = 58/211 (27.49%), Postives = 101/211 (47.87%), Query Frame = 1
Query:  250 PVAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDC-------GSIA--CYLXXXXXXXXXXXXXXXGSDFAIRYGSG-AVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISV----NKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAI 840
            PV ++N  +  Y ++I IG+  Q+F V++DTGSS+LW+P +         G  A  C                 G+ F I YG G + +G + +DTV  G   I  Q+F + T+            GILG+GY +       + +P    ++ +Q ++ +  ++ YL+  N   A  + IFGG++K  Y+G L  +P+       + L+++
Sbjct:   54 PVTLNNE-HVSYAADITIGSNKQKFNVIVDTGSSDLWVPDASVTCDKPRPGQSADFCKGKGIYTPKSSTTSQNLGTPFYIGYGDGSSSQGTLYKDTVGFGGASITKQVFADITKT-------SIPQGILGIGYKTNEAAGDYDNVP---VTLKNQGVIAKNAYSLYLNSPN--AATGQIIFGGVDKAKYSGSLIAVPVTSDRELRITLNSL 251          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: CARP_SACFI (Acid protease OS=Saccharomycopsis fibuligera GN=PEP1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.531e-13
Identity = 63/202 (31.19%), Postives = 97/202 (48.02%), Query Frame = 1
Query:  235 AEAGHPVAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSG-AVEGYISQDTVQIGDIKIKNQLFGEAT-QEPGLAFAFGRFDGILGLGY----------DSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAI-FGGINKDHYTGELTKLPL 801
            ++AG  +++ N  +  Y + I IG P Q+ +V +DTGSS+LW+P     S    L                S F+I YG G +  G  +Q+TV IG   I    FG+AT Q+ G         G+LG+G           +S + + +P     + DQ L+D+  ++ YL   N ++A S +I FGG +   Y+G L  L L
Sbjct:   60 SDAGVTISLENEYSF-YLTTIEIGTPGQKLQVDVDTGSSDLWVPGQGTSS----LYGTYDHTKSTSYKKDRSGFSISYGDGSSARGDWAQETVSIGGASITGLEFGDATSQDVG--------QGLLGIGLKGNEASAQSSNSFTYDNLP---LKLKDQGLIDKAAYSLYL---NSEDATSGSILFGGSDSSKYSGSLATLDL 242          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: CARP3_CANAL (Candidapepsin-3 OS=Candida albicans GN=SAP3 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.285e-12
Identity = 57/206 (27.67%), Postives = 94/206 (45.63%), Query Frame = 1
Query:  283 YFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIA--------CYLXXXXXXXXXXXXXXXGSDFAIRYGSGAV-EGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSI----SVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAES-EAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKES 858
            Y S+I +G+  Q+  VV+DTGSS+LW+P S     A        C                  S F+I YG G   +G   +DT+  G I I  Q F + T       +     GILG+GY +     + + +P    ++ +Q ++ +  ++ YL   N ++A S + IFGG++   Y+G L  LP+       + L+ +    +S
Sbjct:   72 YASDITVGSNKQKLTVVIDTGSSDLWVPDSQVSCQAGQGQDPNFCKNEGTYSPSSSSSSQNLNSPFSIEYGDGTTSQGTWYKDTIGFGGISITKQQFADVT-------STSVDQGILGIGYKTHEAEGNYDNVP---VTLKNQGIISKNAYSLYL---NSRQATSGQIIFGGVDNAKYSGTLIALPVTSDNELRIHLNTVKVAGQS 264          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: CARP2_CANPA (Candidapepsin-2 OS=Candida parapsilosis GN=SAPP2 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.855e-11
Identity = 59/221 (26.70%), Postives = 97/221 (43.89%), Query Frame = 1
Query:  223 TSMHAEAGHPVAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWI--PSSDCGSIACYLXXXXXXXXXXXXXXXGSDF-AIRYGSGAVE-GYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPF----YSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKESA 861
            TS  ++   P +   F    Y   +++G+  QE +VVLDTGSS+ W+   S+ C    C                 GS F +I YG  +   G   QDT+ +G   I NQ F + T       +     GILG+G   +      PP+     ++  Q  +    ++ YL+      A    IFGG++   Y+G+L + PL    Y  V+L ++ +  +++
Sbjct:   55 TSELSKRSSPSSPLYFEGPSYGIRVSVGSNKQEQQVVLDTGSSDFWVVDSSASCQKGNCKQYGTFDPHSSTSFKSLGSSFRSIGYGDKSSSIGTWGQDTIYLGGTSITNQRFADVT-------STSVNQGILGVG--RVETESANPPYDNVPITLKKQGKIKTNAYSLYLNSPG--AATGTIIFGGVDNAKYSGKLIEEPLVSDRYLAVNLKSLNYNGDNS 264          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: CARP2_CANAL (Candidapepsin-2 OS=Candida albicans GN=SAP2 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.855e-11
Identity = 55/211 (26.07%), Postives = 96/211 (45.50%), Query Frame = 1
Query:  250 PVAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPS---------SDCGSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSG-AVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSI----SVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAI 840
            PV + N     Y ++I +G+  Q+  V++DTGSS+LW+P          SD  +  C                  + F I YG G + +G + +DTV  G + IKNQ+  +         +     GILG+GY +     S + +P    ++  Q ++ +  ++ YL+  +   A  + IFGG++   Y+G L  LP+       + L ++
Sbjct:   60 PVTLHNE-QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLNTPFKIGYGDGSSSQGTLYKDTVGFGGVSIKNQVLADVD-------STSIDQGILGVGYKTNEAGGSYDNVP---VTLKKQGVIAKNAYSLYLNSPD--AATGQIIFGGVDNAKYSGSLIALPVTSDRELRISLGSV 257          
The following BLAST results are available for this feature:
BLAST of FC878299 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
CTSD_ASPFU8.047e-1528.49Aspartic-type endopeptidase ctsD OS=Aspergillus fu... [more]
CARP5_CANAL1.373e-1429.44Candidapepsin-5 OS=Candida albicans GN=SAP5 PE=1 S... [more]
CARP4_CANAL1.373e-1429.15Candidapepsin-4 OS=Candida albicans GN=SAP4 PE=3 S... [more]
CARP_RHIMI2.588e-1324.46Mucorpepsin OS=Rhizomucor miehei PE=1 SV=1[more]
CARP_CANTR3.381e-1329.35Candidapepsin OS=Candida tropicalis GN=SAPT1 PE=1 ... [more]
CARP1_CANAL5.767e-1327.49Candidapepsin-1 OS=Candida albicans GN=SAP1 PE=1 S... [more]
CARP_SACFI7.531e-1331.19Acid protease OS=Saccharomycopsis fibuligera GN=PE... [more]
CARP3_CANAL1.285e-1227.67Candidapepsin-3 OS=Candida albicans GN=SAP3 PE=1 S... [more]
CARP2_CANPA1.855e-1126.70Candidapepsin-2 OS=Candida parapsilosis GN=SAPP2 P... [more]
CARP2_CANAL1.855e-1126.07Candidapepsin-2 OS=Candida albicans GN=SAP2 PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA12AH03RM1 IVIA1 Citrus clementina cDNA clone IC0AAA12AH03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878299 ID=FC878299; Name=FC878299; organism=Citrus clementina; type=EST; length=867bp
ACACATCCCCCACACAGAAACAACAAGATGAAGGGCAGTTCTCTCATGGC
AGCCGGTGCGCTGTTTGGCTCGGCTTCGGCTGGTGTCCACAAGATGAAGC
TCAAGAAGGTTCCTCTCTCGGAGCAGCTTGAGGGCGCAAACATTGGCGAG
CACATGCAGGCTCTCGGCCAGAAGTACATGGGTGTTCGCCCCCAGAAGCA
CGCCGACGAGATGTTCAAGGAGACCTCCATGCACGCTGAGGCCGGCCACC
CCGTCGCTGTCAGCAACTTTCTGAACGCTCAGTACTTCTCCGAGATTGCC
ATCGGCAACCCTCCCCAGGAGTTCAAGGTCGTCCTCGACACTGGTAGCTC
CAACCTGTGGATCCCCTCGTCTGACTGTGGTTCCATCGCTTGCTATCTCC
ACAACAAGTACGACCACAGCGACTCTTCGTCGTACAAGAAGAACGGCTCC
GACTTTGCCATCCGCTACGGCTCGGGTGCTGTTGAGGGTTACATCTCTCA
GGACACTGTCCAGATTGGTGACATCAAGATCAAGAACCAGCTCTTCGGTG
AGGCCACTCAGGAGCCTGGCTTGGCTTTCGCCTTTGGCCGCTTCGACGGT
ATCCTCGGTCTTGGATACGACTCCATCAGTGTCAACAAGATCCCCCCTCC
TTTCTACTCAATGATTGACCAGGACCTGCTCGACGAGCCTGTCTTCGCCT
TCTACCTCAGCGACACCAACGACAAGGAGGCTGAGTCCGAGGCCATCTTC
GGTGGTATCAACAAGGACCACTACACCGGCGAGCTCACCAAGCTCCCTCT
GAGACGCAAGGCCTACTGGGAGGTTGACCTTGACGCCATCACCTTCGGCA
AGGAGAGTGCCGAGTTC
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