FC878299

Overview
NameFC878299
Unique NameFC878299
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length867
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7104 contig Ccv1_Contig7104:5..871. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: PEPA_SORUN (Pepsin A OS=Sorex unguiculatus GN=PGA PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 6.118e-39
Identity = 93/258 (36.05%), Postives = 137/258 (53.10%), Query Frame = 1
Query:   85 VHKMKLKKVPLSEQLEGANIGEHMQALGQKYMGVRPQKHADEMFKETSMHAEAGHPVAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKES 858
            +HK+ L K     Q    N       L + ++       A + F   +    A  P+   N+++ +YF  I+IG PPQEF V+ DTGSSNLW+PS  C S AC                     +I YG+G++ G +  DTVQ+  I   NQ+FG +  EPG    +  FDGILGL Y SIS +   P F +M +Q L+ + +F+ YLS +ND ++ S  +FGGI+  +YTG L  +PL  + YW++ +D+IT   +S
Sbjct:   17 IHKVALVKKKSLRQSLWEN------GLLEDFLKTHSLNPASKYFPTEATTLSANQPLV--NYMDMEYFGTISIGTPPQEFTVIFDTGSSNLWVPSIYCSSPACSNHNRFDPQKSSTFKPTSQTVSIAYGTGSMTGVLGYDTVQVAGIADTNQIFGLSQSEPGSFLYYSPFDGILGLAYPSISSSGATPVFDNMWNQGLVSQDLFSVYLS-SND-QSGSVVMFGGIDSSYYTGSLNWVPLSSEGYWQITVDSITMNGQS 264          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: PEPA_CALJA (Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.325e-38
Identity = 82/198 (41.41%), Postives = 118/198 (59.60%), Query Frame = 1
Query:  265 NFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKES 858
            N+L+ +YF  I IG P QEF V+ DTGSSNLW+PS  C S AC                     +I YG+G++ G +  DTVQ+G I   NQ+FG +  EPG    +  FDGILGL Y SIS +   P F ++ +QDL+ + +F+ YLS +ND ++ S  +FGGI+  +YTG L  +P+  + YW++ +D+IT   E+
Sbjct:   69 NYLDMEYFGTIGIGTPAQEFTVIFDTGSSNLWVPSIYCSSPACTNHNRFNPQESSTYQATSQTLSIAYGTGSMTGILGYDTVQVGGIADTNQIFGLSETEPGSFLYYSPFDGILGLAYPSISSSGATPVFDNIWNQDLVSQDLFSVYLS-SND-QSGSVVMFGGIDSSYYTGSLNWVPVSAEGYWQITVDSITMNGEA 264          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: PEPA_HUMAN (Pepsin A OS=Homo sapiens GN=PGA3 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.036e-38
Identity = 81/200 (40.50%), Postives = 117/200 (58.50%), Query Frame = 1
Query:  259 VSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKES 858
            + N+L+ +YF  I IG P Q+F VV DTGSSNLW+PS  C S+AC                     +I YG+G++ G +  DTVQ+G I   NQ+FG +  EPG    +  FDGILGL Y SIS +   P F ++ +Q L+ + +F+ YLS   D ++ S  IFGGI+  +YTG L  +P+  + YW++ +D+IT   E+
Sbjct:   68 LENYLDMEYFGTIGIGTPAQDFTVVFDTGSSNLWVPSVYCSSLACTNHNRFNPEDSSTYQSTSETVSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISSSGATPVFDNIWNQGLVSQDLFSVYLS--ADDQSGSVVIFGGIDSSYYTGSLNWVPVTVEGYWQITVDSITMNGEA 265          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: PEPA2_MACFU (Pepsin A-2/A-3 OS=Macaca fuscata fuscata PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.036e-38
Identity = 80/200 (40.00%), Postives = 117/200 (58.50%), Query Frame = 1
Query:  259 VSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKES 858
            + N+L+ +YF  I IG P Q+F V+ DTGSSNLW+PS  C S+AC                     +I YG+G++ G +  DTVQ+G I   NQ+FG +  EPG    +  FDGILGL Y SIS +   P F ++ +Q L+ + +F+ YLS   D ++ S  IFGGI+  +YTG L  +P+  + YW++ +D+IT   E+
Sbjct:   68 LENYLDMEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACTNHNRFNPQDSSTYQSTSGTVSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISSSGATPVFDNIWNQGLVSQDLFSVYLS--ADDQSGSVVIFGGIDSSYYTGSLNWVPVSVEGYWQISVDSITMNGEA 265          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: RENI2_MOUSE (Renin-2 OS=Mus musculus GN=Ren2 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.966e-38
Identity = 78/219 (35.62%), Postives = 125/219 (57.08%), Query Frame = 1
Query:  208 EMFKETSMHAEAGHPVAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGS--IACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKES 858
            ++F + S   +   PV ++N+LN+QY+ EI IG PPQ FKV+ DTGS+NLW+PS+ C    +AC +               G DF I YGSG V+G++SQD+V +G I +  Q FGE T+ P + F   +FDG+LG+G+ + +V  + P F  ++ Q +L E VF+ Y  +        E + GG + +HY G+   + L +   W++ +  ++ G  +
Sbjct:   58 DVFTKRSSLTDLISPVVLTNYLNSQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSRLYLACGIHSLYESSDSSSYMENGDDFTIHYGSGRVKGFLSQDSVTVGGITV-TQTFGEVTELPLIPFMLAQFDGVLGMGFPAQAVGGVTPVFDHILSQGVLKEKVFSVYY-NRGPHLLGGEVVLGGSDPEHYQGDFHYVSLSKTDSWQITMKGVSVGSST 274          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: PEPC_MONDO (Gastricsin OS=Monodelphis domestica GN=PGC PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 6.765e-38
Identity = 85/244 (34.84%), Postives = 131/244 (53.69%), Query Frame = 1
Query:  130 EGANIGEHMQALGQKYMGVRPQKHADEMFKET-SMHAEAGHPVAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKES 858
            +G +I E M+  G     +R  K AD   K   +  A A  P+  +N+L++ YF EI+IG PPQ F V+ DTGSSNLW+PS+ C S AC                 G  + + YGSG++   +  DTV + +I + NQ FG +  EP   F +  FDGILG+ Y +++V   P     M+ Q  L EP+F+FY S     +   E I GG++   Y+G++T  P+ ++ YW++ ++    G ++
Sbjct:   25 KGKSIRERMEENGVLEDFLRYNKKADPAAKFLFNKDAVAYEPI--TNYLDSFYFGEISIGTPPQNFLVLFDTGSSNLWVPSTYCQSQACSNHNRFSPSQSSTFTNGGQTYTLSYGSGSLTVVLGYDTVTVQNIVVSNQEFGLSESEPTSPFYYSDFDGILGMAYPAMAVGNSPTVMQGMLQQGQLSEPIFSFYFSRQPTHQYGGELILGGVDPQLYSGQITWTPVTQEVYWQIGIEEFAIGNQA 266          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: PEPA_BOVIN (Pepsin A OS=Bos taurus GN=PGA PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 6.765e-38
Identity = 93/266 (34.96%), Postives = 140/266 (52.63%), Query Frame = 1
Query:   94 MKLKKVPLSEQ-------LEGANIGEHMQA----LGQKYMGVRPQKHADEMFKETSMHAEAGHPVAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKES 858
            M + K+PL ++       +E   + E M+     LG KY+     + A  +  E  +           N+L+ +YF  I IG P Q+F V+ DTGSSNLW+PS  C S AC                     +I YG+G++ G +  DTVQ+G I   NQ+FG +  EPG    +  FDGILGL Y SIS +   P F ++ DQ L+ + +F+ YLS  +++E+ S  IFG I+  +Y+G L  +P+  + YW++ +D+IT   ES
Sbjct:    1 MSVVKIPLVKKKSLRQNLIENGKLKEFMRTHKYNLGSKYI-----REAATLVSEQPLQ----------NYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSIYCSSEACTNHNRFNPQDSSTYEATSETLSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISSSGATPVFDNIWDQGLVSQDLFSVYLS--SNEESGSVVIFGDIDSSYYSGSLNWVPVSVEGYWQITVDSITMNGES 249          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: PEPA_RHIFE (Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.835e-38
Identity = 87/229 (37.99%), Postives = 128/229 (55.90%), Query Frame = 1
Query:  157 QALGQKYMGVRPQKHADEMFKETSMHAEAGHPVAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAIT 843
            Q L Q Y+       A +  KE +    A  P+   N+++ +YF  I IG PPQEF V+ DTGSSNLW+PS  C S AC                     ++ YG+G++ G +  DTVQ+G I   NQ+FG +  EPG    +  FDGILGL Y SI+ +   P F ++ +Q L+ + +F+ YLS +ND +  S  +FGGI+  ++TG L  +PL  + YW++ +D+IT
Sbjct:   35 QGLLQDYLKTHSINPASKYLKEAASMM-ATQPL--ENYMDMEYFGTIGIGTPPQEFTVIFDTGSSNLWVPSVYCSSPACSNHNRFNPQQSSTYQGTNQKLSVAYGTGSMTGILGYDTVQVGGITDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSIASSGATPVFDNIWNQGLVSQDLFSVYLS-SND-QGGSVVMFGGIDSSYFTGNLNWVPLSSETYWQITVDSIT 258          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: PEPC_CALJA (Gastricsin OS=Callithrix jacchus GN=PGC PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.154e-37
Identity = 84/252 (33.33%), Postives = 135/252 (53.57%), Query Frame = 1
Query:  106 KVPLSEQLEGANIGEHMQALGQKYMGVRPQKHADEMFKETSMHAEAGHPVAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKESA 861
            KVPL +     +I E M+  G  +  ++  KH        S  + +  P+   ++++A YF EI+IG PPQ F V+ DTGSSNLW+PS  C S AC                 G  F+++YGSG++ G+   DT+ +  I++ NQ FG +  EPG  F + +FDGI+GL Y ++S+         M+ +  L  PVF+FYLS+          IFGG++   YTG++   P+ ++ YW++ ++    G +++
Sbjct:   20 KVPLKKF---KSIRETMKEKGLLWEFLKTHKHDPARKYRVSDLSVSYEPM---DYMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSHSRFNPSASSTYSSNGQTFSLQYGSGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSMGGATTAMQGMLQEGALTSPVFSFYLSNQQGSSG-GAVIFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQAS 264          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: PEPA_SUNMU (Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 1.154e-37
Identity = 80/198 (40.40%), Postives = 117/198 (59.09%), Query Frame = 1
Query:  265 NFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKES 858
            N+++ +YF  I IG PPQEF V+ DTGSSNLW+PS  C S AC                     +I YG+G++ G +  DTVQ+  I   NQ+FG +  EPG    +  FDGILGL Y +I+ +   P F +M +Q L+ + +F+ YLS +ND ++ S  IFGGI+  +YTG L  +PL  + YW++ +D+IT   ++
Sbjct:   69 NYMDMEYFGTIGIGTPPQEFTVIFDTGSSNLWVPSVYCSSPACSNHNRFNPQKSSTFQSTSQTLSIAYGTGSMTGVLGYDTVQVAGIADTNQIFGLSQTEPGSFLYYSPFDGILGLAYPNIASSGATPVFDNMWNQGLVSQDLFSVYLS-SND-QSGSVVIFGGIDSSYYTGNLNWVPLSSEGYWQITVDSITMNGQA 264          
The following BLAST results are available for this feature:
BLAST of FC878299 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
PEPA_SORUN6.118e-3936.05Pepsin A OS=Sorex unguiculatus GN=PGA PE=2 SV=1[more]
PEPA_CALJA2.325e-3841.41Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1[more]
PEPA_HUMAN3.036e-3840.50Pepsin A OS=Homo sapiens GN=PGA3 PE=1 SV=1[more]
PEPA2_MACFU3.036e-3840.00Pepsin A-2/A-3 OS=Macaca fuscata fuscata PE=1 SV=1[more]
RENI2_MOUSE3.966e-3835.62Renin-2 OS=Mus musculus GN=Ren2 PE=1 SV=1[more]
PEPC_MONDO6.765e-3834.84Gastricsin OS=Monodelphis domestica GN=PGC PE=2 SV... [more]
PEPA_BOVIN6.765e-3834.96Pepsin A OS=Bos taurus GN=PGA PE=1 SV=2[more]
PEPA_RHIFE8.835e-3837.99Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 ... [more]
PEPC_CALJA1.154e-3733.33Gastricsin OS=Callithrix jacchus GN=PGC PE=1 SV=1[more]
PEPA_SUNMU1.154e-3740.40Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionIC0AAA12AH03RM1 IVIA1 Citrus clementina cDNA clone IC0AAA12AH03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878299 ID=FC878299; Name=FC878299; organism=Citrus clementina; type=EST; length=867bp
ACACATCCCCCACACAGAAACAACAAGATGAAGGGCAGTTCTCTCATGGC
AGCCGGTGCGCTGTTTGGCTCGGCTTCGGCTGGTGTCCACAAGATGAAGC
TCAAGAAGGTTCCTCTCTCGGAGCAGCTTGAGGGCGCAAACATTGGCGAG
CACATGCAGGCTCTCGGCCAGAAGTACATGGGTGTTCGCCCCCAGAAGCA
CGCCGACGAGATGTTCAAGGAGACCTCCATGCACGCTGAGGCCGGCCACC
CCGTCGCTGTCAGCAACTTTCTGAACGCTCAGTACTTCTCCGAGATTGCC
ATCGGCAACCCTCCCCAGGAGTTCAAGGTCGTCCTCGACACTGGTAGCTC
CAACCTGTGGATCCCCTCGTCTGACTGTGGTTCCATCGCTTGCTATCTCC
ACAACAAGTACGACCACAGCGACTCTTCGTCGTACAAGAAGAACGGCTCC
GACTTTGCCATCCGCTACGGCTCGGGTGCTGTTGAGGGTTACATCTCTCA
GGACACTGTCCAGATTGGTGACATCAAGATCAAGAACCAGCTCTTCGGTG
AGGCCACTCAGGAGCCTGGCTTGGCTTTCGCCTTTGGCCGCTTCGACGGT
ATCCTCGGTCTTGGATACGACTCCATCAGTGTCAACAAGATCCCCCCTCC
TTTCTACTCAATGATTGACCAGGACCTGCTCGACGAGCCTGTCTTCGCCT
TCTACCTCAGCGACACCAACGACAAGGAGGCTGAGTCCGAGGCCATCTTC
GGTGGTATCAACAAGGACCACTACACCGGCGAGCTCACCAAGCTCCCTCT
GAGACGCAAGGCCTACTGGGAGGTTGACCTTGACGCCATCACCTTCGGCA
AGGAGAGTGCCGAGTTC
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