FC878299

Overview
NameFC878299
Unique NameFC878299
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length867
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: RENI_CALJA (Renin OS=Callithrix jacchus GN=REN PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.507e-37
Identity = 74/206 (35.92%), Postives = 115/206 (55.83%), Query Frame = 1
Query:  253 VAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSI--ACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLS--DTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKES 858
            V ++N+++ QY+ EI IG PPQ FKVV DTGSSN+W+PSS C  +  AC                 G++  +RY +G V G++SQD + +G I +  Q FGE T+ P L F    FDG++G+G+   ++ K+ P F ++I Q LL E VF+FY +    N +    + + GG +  HY G    + L R   W++ +  ++ G  +
Sbjct:   70 VILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDVITVGGITV-TQTFGEVTEMPALPFMLAEFDGVVGMGFSEQAIGKVTPLFDNIISQGLLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIRTGLWQIPMKGVSVGSST 274          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: RENI1_MOUSE (Renin-1 OS=Mus musculus GN=Ren1 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.507e-37
Identity = 76/205 (37.07%), Postives = 117/205 (57.07%), Query Frame = 1
Query:  250 PVAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGS--IACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKES 858
            PV ++N+LN QY+ EI IG PPQ FKV+ DTGS+NLW+PS+ C    +AC +               GSDF I YGSG V+G++SQD+V +G I +  Q FGE T+ P + F   +FDG+LG+G+ + +V  + P F  ++ Q +L E VF+ Y  +        E + GG +  HY G    + + +   W++ +  ++ G  +
Sbjct:   73 PVVLTNYLNTQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSRLYLACGIHSLYESSDSSSYMENGSDFTIHYGSGRVKGFLSQDSVTVGGITV-TQTFGEVTELPLIPFMLAKFDGVLGMGFPAQAVGGVTPVFDHILSQGVLKEEVFSVYY-NRGSHLLGGEVVLGGSDPQHYQGNFHYVSISKTDSWQITMKGVSVGSST 275          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: PEPC_SUNMU (Gastricsin OS=Suncus murinus GN=PGC PE=1 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.968e-37
Identity = 71/197 (36.04%), Postives = 114/197 (57.87%), Query Frame = 1
Query:  268 FLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKES 858
            +++A YF EI+IG PPQ F V+ DTGSSNLW+PS  C S AC                 G  F+++YGSG++ G+   DT+ + +IK+ +Q FG +  EPG  F + +FDGI+G+ Y S+++         M+ +  L  PVF+FYLS+    +     IFGG++   YTG++   P+ ++ YW++ ++    G ++
Sbjct:   68 YMDASYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTGHARFNPNQSSTYSTNGQTFSLQYGSGSLTGFFGYDTMTVQNIKVPHQEFGLSQNEPGTNFIYAQFDGIMGMAYPSLAMGGATTALQGMLQEGALTSPVFSFYLSNQQGSQNGGAVIFGGVDNSLYTGQIFWAPVTQELYWQIGVEEFLIGGQA 264          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: PEPA_CANFA (Pepsin A OS=Canis familiaris GN=PGA PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.968e-37
Identity = 76/201 (37.81%), Postives = 118/201 (58.71%), Query Frame = 1
Query:  256 AVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKES 858
            ++ N+++ +YF  I IG PPQEF V+ DTGSSNLW+PS  C S AC                     +I YG+G++ G +  DTVQ+G I   NQ+FG +  EPG    +  FDGILGL Y  IS +   P F +M ++ L+ + +F+ YLS  +D ++ S  +FGGI+  +Y+G L  +P+  + YW++ +D++T   ++
Sbjct:   65 SLKNYMDMEYFGTIGIGTPPQEFTVIFDTGSSNLWVPSVYCSSPACSNHNRFNPQESSTYQGTNRPVSIAYGTGSMTGILGYDTVQVGGIADTNQIFGLSETEPGSFLYYAPFDGILGLAYPQISASGATPVFDNMWNEGLVSQDLFSVYLS--SDDQSGSVVMFGGIDSSYYSGNLNWVPVSVEGYWQITVDSVTMNGQA 263          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: PEPA4_MACFU (Pepsin A-4 OS=Macaca fuscata fuscata GN=PGA PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.968e-37
Identity = 80/195 (41.03%), Postives = 114/195 (58.46%), Query Frame = 1
Query:  259 VSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAIT 843
            + N+L+ +YF  I IG P Q F VV DTGSSNLW+PS  C S+AC                     +I YG+G++ G +  DTV++G I   NQ+FG +  EPG    F  FDGILGL Y SIS +   P F ++ +Q L+ + +F+ YLS   D ++ S  IFGGI+  +YTG L  +P+  + YW++ +D+IT
Sbjct:   68 LENYLDVEYFGTIGIGTPAQNFTVVFDTGSSNLWVPSVYCYSLACMDHNLFNPQDSSTYRATSKTVSITYGTGSMTGILGYDTVKVGGISDTNQIFGLSETEPGFFLYFAPFDGILGLAYPSISSSGATPVFDNIWNQRLVSQDLFSVYLS--ADDQSGSVVIFGGIDSSYYTGSLNWVPVSVEGYWQISVDSIT 260          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: PEPC_SORUN (Gastricsin OS=Sorex unguiculatus GN=PGC PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.571e-37
Identity = 71/197 (36.04%), Postives = 114/197 (57.87%), Query Frame = 1
Query:  268 FLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKES 858
            +L+A YF EI+IG PPQ F V+ DTGSSNLW+PS  C S AC                 G  F+++YGSG++ G+   DT+ + +IK+ +Q FG +  EPG  F + +FDGI+G+ Y ++++         M+    LD PVF+FYLS+    +     +FGG++   YTG++   P+ ++ YW++ ++    G ++
Sbjct:   68 YLDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTGHARFNPSKSSTYSTNGQTFSLQYGSGSLTGFFGYDTMTLQNIKVPHQEFGLSQNEPGENFVYAQFDGIMGMAYPTLAMGGATTALQGMLQAGALDSPVFSFYLSNQQSSKDGGAVVFGGVDNSLYTGQIFWTPVTQELYWQIGVEQFLIGGQA 264          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: PEPC_MACFU (Gastricsin (Fragment) OS=Macaca fuscata fuscata GN=PGC PE=1 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 4.385e-37
Identity = 71/198 (35.86%), Postives = 113/198 (57.07%), Query Frame = 1
Query:  268 FLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKESA 861
            +++A YF EI+IG PPQ F V+ DTGSSNLW+PS  C S AC                 G  F+++YGSG++ G+   DT+ +  I++ NQ FG +  EPG  F + +FDGI+GL Y ++SV+        M+ +  L  P+F+ YLSD          +FGG++   YTG++   P+ ++ YW++ ++    G +++
Sbjct:   57 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPTLSVDGATTAMQGMVQEGALTSPIFSVYLSDQQGSSG-GAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQAS 253          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: PEPC_HUMAN (Gastricsin OS=Homo sapiens GN=PGC PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.727e-37
Identity = 71/198 (35.86%), Postives = 114/198 (57.58%), Query Frame = 1
Query:  268 FLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKESA 861
            +++A YF EI+IG PPQ F V+ DTGSSNLW+PS  C S AC                 G  F+++YGSG++ G+   DT+ +  I++ NQ FG +  EPG  F + +FDGI+GL Y ++SV++       M+ +  L  PVF+ YLS+          +FGG++   YTG++   P+ ++ YW++ ++    G +++
Sbjct:   68 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQGSSG-GAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQAS 264          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: PEPB_CANFA (Pepsin B OS=Canis familiaris GN=PGB PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.727e-37
Identity = 74/199 (37.19%), Postives = 112/199 (56.28%), Query Frame = 1
Query:  262 SNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKES 858
            +N+L++ YF EI+IG PPQ F ++ DTGSSNLW+PS+ C S AC                    + + YG G++   +  DTV + +I I NQLFG +  EP   F +  FDGILG+ Y +++V+  P    +M+ Q  L +P+F+FY S     E   E I GG++   Y+GE+   P+ R+ YW+V +D    G ++
Sbjct:   67 TNYLDSYYFGEISIGTPPQNFLILFDTGSSNLWVPSTYCQSQACSNHNRFNPSRSSTYQSSEQTYTLAYGFGSLTVLLGYDTVTVQNIVIHNQLFGMSENEPNYPFYYSYFDGILGMAYSNLAVDNGPTVLQNMMQQGQLTQPIFSFYFSPQPTYEYGGELILGGVDTQFYSGEIVWAPVTREMYWQVAIDEFLIGNQA 265          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: PAG_HORSE (Pregnancy-associated glycoprotein OS=Equus caballus GN=PAG PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.727e-37
Identity = 77/205 (37.56%), Postives = 119/205 (58.05%), Query Frame = 1
Query:  232 HAEAGHPVA-VSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAIT 843
            HA++G     + N+L+  Y   I++G PPQEF+V+ DTGS++LW+PS  C S AC                 G    + YG+G + G++  DT++I  +  +NQ FG + +EP        FDGILGL Y S+SV  + P F ++ +Q LL + +FAFYLS    K   S  +FGG++  +YTGEL  +P+ +  YW++ +D+I+
Sbjct:   56 HADSGVAFEPMRNYLDIAYMGIISVGTPPQEFQVIFDTGSADLWVPSIYCSSPACSNHNTFNPLRSSTFVASGQPIKLIYGTGKMSGFVGYDTIKISSLVDRNQAFGLSVEEPDKILELATFDGILGLSYPSLSVKGVTPVFDNLWNQGLLSQKLFAFYLSRKGKK--GSVVMFGGVDPSYYTGELHWVPVSKPLYWQISMDSIS 258          
The following BLAST results are available for this feature:
BLAST of FC878299 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
RENI_CALJA1.507e-3735.92Renin OS=Callithrix jacchus GN=REN PE=2 SV=1[more]
RENI1_MOUSE1.507e-3737.07Renin-1 OS=Mus musculus GN=Ren1 PE=1 SV=1[more]
PEPC_SUNMU1.968e-3736.04Gastricsin OS=Suncus murinus GN=PGC PE=1 SV=2[more]
PEPA_CANFA1.968e-3737.81Pepsin A OS=Canis familiaris GN=PGA PE=2 SV=1[more]
PEPA4_MACFU1.968e-3741.03Pepsin A-4 OS=Macaca fuscata fuscata GN=PGA PE=1 S... [more]
PEPC_SORUN2.571e-3736.04Gastricsin OS=Sorex unguiculatus GN=PGC PE=2 SV=1[more]
PEPC_MACFU4.385e-3735.86Gastricsin (Fragment) OS=Macaca fuscata fuscata GN... [more]
PEPC_HUMAN5.727e-3735.86Gastricsin OS=Homo sapiens GN=PGC PE=1 SV=1[more]
PEPB_CANFA5.727e-3737.19Pepsin B OS=Canis familiaris GN=PGB PE=1 SV=1[more]
PAG_HORSE5.727e-3737.56Pregnancy-associated glycoprotein OS=Equus caballu... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA12AH03RM1 IVIA1 Citrus clementina cDNA clone IC0AAA12AH03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878299 ID=FC878299; Name=FC878299; organism=Citrus clementina; type=EST; length=867bp
ACACATCCCCCACACAGAAACAACAAGATGAAGGGCAGTTCTCTCATGGC
AGCCGGTGCGCTGTTTGGCTCGGCTTCGGCTGGTGTCCACAAGATGAAGC
TCAAGAAGGTTCCTCTCTCGGAGCAGCTTGAGGGCGCAAACATTGGCGAG
CACATGCAGGCTCTCGGCCAGAAGTACATGGGTGTTCGCCCCCAGAAGCA
CGCCGACGAGATGTTCAAGGAGACCTCCATGCACGCTGAGGCCGGCCACC
CCGTCGCTGTCAGCAACTTTCTGAACGCTCAGTACTTCTCCGAGATTGCC
ATCGGCAACCCTCCCCAGGAGTTCAAGGTCGTCCTCGACACTGGTAGCTC
CAACCTGTGGATCCCCTCGTCTGACTGTGGTTCCATCGCTTGCTATCTCC
ACAACAAGTACGACCACAGCGACTCTTCGTCGTACAAGAAGAACGGCTCC
GACTTTGCCATCCGCTACGGCTCGGGTGCTGTTGAGGGTTACATCTCTCA
GGACACTGTCCAGATTGGTGACATCAAGATCAAGAACCAGCTCTTCGGTG
AGGCCACTCAGGAGCCTGGCTTGGCTTTCGCCTTTGGCCGCTTCGACGGT
ATCCTCGGTCTTGGATACGACTCCATCAGTGTCAACAAGATCCCCCCTCC
TTTCTACTCAATGATTGACCAGGACCTGCTCGACGAGCCTGTCTTCGCCT
TCTACCTCAGCGACACCAACGACAAGGAGGCTGAGTCCGAGGCCATCTTC
GGTGGTATCAACAAGGACCACTACACCGGCGAGCTCACCAAGCTCCCTCT
GAGACGCAAGGCCTACTGGGAGGTTGACCTTGACGCCATCACCTTCGGCA
AGGAGAGTGCCGAGTTC
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