FC878299

Overview
NameFC878299
Unique NameFC878299
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length867
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7104 contig Ccv1_Contig7104:5..871. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: PEPC_RHIFE (Gastricsin OS=Rhinolophus ferrumequinum GN=PGC PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.479e-37
Identity = 81/255 (31.76%), Postives = 136/255 (53.33%), Query Frame = 1
Query:   97 KLKKVPLSEQLEGANIGEHMQALGQKYMGVRPQKHADEMFKETSMHAEAGHPVAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKESA 861
            K+ KVPL +     ++ E M+  G     ++  K+        +  + A  P+A   +++A YF EI+IG PPQ F V+ DTGSSNLW+PS  C + AC                 G  F+++YGSG++ G+   DT+ +  I++ NQ FG +  EPG  F + +FDGI+G+ Y S+++         M+ +  L  PVF+FYLS+    +     IFGG++   Y G++   P+ ++ YW++ ++    G +++
Sbjct:   17 KVVKVPLKKL---KSLRETMKEKGLLEEFLKNHKYDPAQKYRYTDFSVAYEPMA---YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQTQACTGHTRFNPSQSSTYSTNGQTFSLQYGSGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGMAYPSLAMGGATTALQGMLQEGALTSPVFSFYLSNQQGSQNGGAVIFGGVDNSLYQGQIYWAPVTQELYWQIGIEEFLIGGQAS 265          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: RENI_PANTR (Renin OS=Pan troglodytes GN=REN PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.666e-36
Identity = 71/206 (34.47%), Postives = 116/206 (56.31%), Query Frame = 1
Query:  253 VAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSI--ACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLS--DTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKES 858
            V ++N+++ QY+ EI IG PPQ FKVV DTGSSN+W+PSS C  +  AC                 G++  +RY +G V G++SQD + +G I +  Q+FGE T+ P L F    FDG++G+G+   ++ ++ P F ++I Q +L E VF+FY +    N +    + + GG +  HY G    + L +   W++ +  ++ G  +
Sbjct:   76 VILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSST 280          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: RENI_HUMAN (Renin OS=Homo sapiens GN=REN PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.666e-36
Identity = 71/206 (34.47%), Postives = 116/206 (56.31%), Query Frame = 1
Query:  253 VAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSI--ACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLS--DTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKES 858
            V ++N+++ QY+ EI IG PPQ FKVV DTGSSN+W+PSS C  +  AC                 G++  +RY +G V G++SQD + +G I +  Q+FGE T+ P L F    FDG++G+G+   ++ ++ P F ++I Q +L E VF+FY +    N +    + + GG +  HY G    + L +   W++ +  ++ G  +
Sbjct:   76 VILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSST 280          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: PEPC_RAT (Gastricsin OS=Rattus norvegicus GN=Pgc PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.666e-36
Identity = 70/198 (35.35%), Postives = 112/198 (56.57%), Query Frame = 1
Query:  268 FLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKESA 861
            +++A YF EI+IG PPQ F V+ DTGSSNLW+ S  C S AC                 G  F+++YG+G++ G+   DT+ +  I++ NQ FG +  EPG  F + +FDGI+GL Y  +S          M+ +  L +P+F  YL          + +FGG++K+ YTGE+T +P+ ++ YW++ +D    G +++
Sbjct:   71 YMDASYFGEISIGTPPQNFLVLFDTGSSNLWVSSVYCQSEACTTHARFNPSKSSTYYTEGQTFSLQYGTGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPGLSSGGATTALQGMLGEGALSQPLFGVYLGSQQGSNG-GQIVFGGVDKNLYTGEITWVPVTQELYWQITIDDFLIGDQAS 267          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: RENI_RAT (Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 2.176e-36
Identity = 77/214 (35.98%), Postives = 119/214 (55.61%), Query Frame = 1
Query:  214 FKETSMHAEAGHPVAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSI--ACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFG 849
            F + S       PV ++N+L+ QY+ EI IG P Q FKV+ DTGS+NLW+PS+ CG +  AC +               G++F I YGSG V+G++SQD V +G I I  Q FGE T+ P + F   +FDG+LG+G+ + +V+ + P F  ++ Q +L E VF+ Y S         E + GG +  HY G    + + +   W++ +  ++ G
Sbjct:   61 FIKKSSFTNVTSPVVLTNYLDTQYYGEIGIGTPSQTFKVIFDTGSANLWVPSTKCGPLYTACEIHNLYDSSESSSYMENGTEFTIHYGSGKVKGFLSQDVVTVGGI-IVTQTFGEVTELPLIPFMLAKFDGVLGMGFPAQAVDGVIPVFDHILSQRVLKEEVFSVYYS-RESHLLGGEVVLGGSDPQHYQGNFHYVSISKAGSWQITMKGVSVG 272          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: PEPC_MOUSE (Gastricsin OS=Mus musculus GN=Pgc PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.176e-36
Identity = 69/198 (34.85%), Postives = 113/198 (57.07%), Query Frame = 1
Query:  268 FLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKESA 861
            +++A Y+ EI+IG PPQ F V+ DTGSSNLW+ S  C S AC                 G  F+++YG+G++ G+   DT+++  I++ NQ FG +  EPG  F + +FDGI+GL Y  +S          M+ +  L +P+F  YL          + +FGG++++ YTGELT +P+ ++ YW++ +D    G +++
Sbjct:   71 YMDASYYGEISIGTPPQNFLVLFDTGSSNLWVSSVYCQSEACTTHTRYNPSKSSTYYTQGQTFSLQYGTGSLTGFFGYDTLRVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPGLSSGGATTALQGMLGEGALSQPLFGVYLGSQQGSNG-GQIVFGGVDENLYTGELTWIPVTQELYWQITIDDFLIGNQAS 267          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: RENI_CANFA (Renin OS=Canis familiaris GN=REN PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.712e-36
Identity = 75/200 (37.50%), Postives = 115/200 (57.50%), Query Frame = 1
Query:  250 PVAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSI--ACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAIT 843
            PV ++N+L+ QY+ EI IG PPQ FKVV DTGS+NLW+PS+ C  +  AC +               G+ F IRYGSG V+G++SQD V +G I +  Q FGE T+ P + F   +FDG+LG+G+ + +V  + P F  ++ Q +L E VF+ Y S  N      E + GG +  +Y G    + + +   W++ +  ++
Sbjct:   74 PVVLTNYLDTQYYGEIGIGTPPQTFKVVFDTGSANLWVPSTRCSPLYTACEIHCLYDSSESSSYMENGTTFTIRYGSGKVKGFLSQDMVTVGGITV-TQTFGEVTELPLIPFMLAKFDGVLGMGFPAQAVGGVTPVFDHILSQGVLKEEVFSVYYS-RNSHLLGGEVVLGGSDPQYYQGNFHYVSISKTGSWQIKMKGVS 271          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: RENI_MACFA (Renin OS=Macaca fascicularis GN=REN PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.848e-36
Identity = 70/206 (33.98%), Postives = 116/206 (56.31%), Query Frame = 1
Query:  253 VAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSI--ACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLS--DTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKES 858
            V ++N+++ QY+ EI IG PPQ FKVV DTGSSN+W+PSS C  +  AC                 G++  +RY +G V G++SQD + +G I +  Q+FGE T+ P L F    FDG++G+G+   ++ ++ P F +++ Q +L E VF+FY +    N +    + + GG +  HY G    + L +   W++ +  ++ G  +
Sbjct:   76 VILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNILSQGVLKEDVFSFYYNRDSENAQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSST 280          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: CATE_RANCA (Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.848e-36
Identity = 71/192 (36.98%), Postives = 112/192 (58.33%), Query Frame = 1
Query:  265 NFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAI 840
            N+L+ +YF +I+IG PPQ+F V+ DTGSSNLW+PS  C S AC                 G  F I+YG+G + G +  D V +  I +++Q F E+  EPG  F    FDGILGL Y +++V+   P F +MI Q+L++ P+F  Y++   +     E + GG +   ++G+L  +P+  + YW++ +D+I
Sbjct:   68 NYLDVEYFGQISIGTPPQQFTVIFDTGSSNLWVPSIYCTSQACTKHNRYRPSESTTYVSNGEAFFIQYGTGNLTGILGIDQVTVQGITVQSQTFAESVSEPGSTFQDSNFDGILGLAYPNLAVDNCIPVFDNMIAQNLVELPLFGVYMNRDPNSADGGELVLGGFDTSRFSGQLNWVPITVQGYWQIQVDSI 259          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: RENI_MACMU (Renin OS=Macaca mulatta GN=REN PE=2 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 6.331e-36
Identity = 70/206 (33.98%), Postives = 116/206 (56.31%), Query Frame = 1
Query:  253 VAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSI--ACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLS--DTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKES 858
            V ++N+++ QY+ EI IG PPQ FKVV DTGSSN+W+PSS C  +  AC                 G++  +RY +G V G++SQD + +G I +  Q+FGE T+ P L F    FDG++G+G+   ++ ++ P F +++ Q +L E VF+FY +    N +    + + GG +  HY G    + L +   W++ +  ++ G  +
Sbjct:   76 VILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNILSQGVLKEDVFSFYYNRDSENAQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIPMKGVSVGSST 280          
The following BLAST results are available for this feature:
BLAST of FC878299 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
PEPC_RHIFE7.479e-3731.76Gastricsin OS=Rhinolophus ferrumequinum GN=PGC PE=... [more]
RENI_PANTR1.666e-3634.47Renin OS=Pan troglodytes GN=REN PE=3 SV=1[more]
RENI_HUMAN1.666e-3634.47Renin OS=Homo sapiens GN=REN PE=1 SV=1[more]
PEPC_RAT1.666e-3635.35Gastricsin OS=Rattus norvegicus GN=Pgc PE=1 SV=1[more]
RENI_RAT2.176e-3635.98Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2[more]
PEPC_MOUSE2.176e-3634.85Gastricsin OS=Mus musculus GN=Pgc PE=2 SV=1[more]
RENI_CANFA3.712e-3637.50Renin OS=Canis familiaris GN=REN PE=2 SV=1[more]
RENI_MACFA4.848e-3633.98Renin OS=Macaca fascicularis GN=REN PE=2 SV=1[more]
CATE_RANCA4.848e-3636.98Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1[more]
RENI_MACMU6.331e-3633.98Renin OS=Macaca mulatta GN=REN PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionIC0AAA12AH03RM1 IVIA1 Citrus clementina cDNA clone IC0AAA12AH03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878299 ID=FC878299; Name=FC878299; organism=Citrus clementina; type=EST; length=867bp
ACACATCCCCCACACAGAAACAACAAGATGAAGGGCAGTTCTCTCATGGC
AGCCGGTGCGCTGTTTGGCTCGGCTTCGGCTGGTGTCCACAAGATGAAGC
TCAAGAAGGTTCCTCTCTCGGAGCAGCTTGAGGGCGCAAACATTGGCGAG
CACATGCAGGCTCTCGGCCAGAAGTACATGGGTGTTCGCCCCCAGAAGCA
CGCCGACGAGATGTTCAAGGAGACCTCCATGCACGCTGAGGCCGGCCACC
CCGTCGCTGTCAGCAACTTTCTGAACGCTCAGTACTTCTCCGAGATTGCC
ATCGGCAACCCTCCCCAGGAGTTCAAGGTCGTCCTCGACACTGGTAGCTC
CAACCTGTGGATCCCCTCGTCTGACTGTGGTTCCATCGCTTGCTATCTCC
ACAACAAGTACGACCACAGCGACTCTTCGTCGTACAAGAAGAACGGCTCC
GACTTTGCCATCCGCTACGGCTCGGGTGCTGTTGAGGGTTACATCTCTCA
GGACACTGTCCAGATTGGTGACATCAAGATCAAGAACCAGCTCTTCGGTG
AGGCCACTCAGGAGCCTGGCTTGGCTTTCGCCTTTGGCCGCTTCGACGGT
ATCCTCGGTCTTGGATACGACTCCATCAGTGTCAACAAGATCCCCCCTCC
TTTCTACTCAATGATTGACCAGGACCTGCTCGACGAGCCTGTCTTCGCCT
TCTACCTCAGCGACACCAACGACAAGGAGGCTGAGTCCGAGGCCATCTTC
GGTGGTATCAACAAGGACCACTACACCGGCGAGCTCACCAAGCTCCCTCT
GAGACGCAAGGCCTACTGGGAGGTTGACCTTGACGCCATCACCTTCGGCA
AGGAGAGTGCCGAGTTC
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