FC878354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: AGAP3_MOUSE (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 OS=Mus musculus GN=Agap3 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.203e-23 Identity = 58/130 (44.62%), Postives = 72/130 (55.38%), Query Frame = 1 Query: 463 IDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKY 852 + +R V GN C DC AP PDWASLNLG L+CIECSG+HR+LG H+S+VRSL LD W P ++ + ++GNA ANSVWE L S KP KE++I AKY Sbjct: 664 VQAVRTVRGNSLCIDCEAPNPDWASLNLGALMCIECSGIHRHLGAHLSRVRSLDLD--DWPPELLAVMTAMGNALANSVWEGALDGYS-----------------------KPGPEACREEKERWIRAKY 768
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: ACAP2_HUMAN (Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=ACAP2 PE=1 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 1.203e-23 Identity = 69/206 (33.50%), Postives = 98/206 (47.57%), Query Frame = 1 Query: 88 NLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSSQAPERCLPTSPMXXXXXXXXXXXXXXXXXXXXXXXVEEYTSERNLTSAYHEXXXXXXXXXXXCVKSEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWE 705 +L T+K + + RFCF ++SPTK+ LQA+S + WI+ + IA+ + E + S +L S +K E + ++ + GN C DCG +P WAS+NLG+ +CIECSG+HR+LGVH SKVRSLTLD WEP ++ L LGN N V+E Sbjct: 312 DLRLCTVK-HCEDIERRFCFEVVSPTKSCMLQADSEKLRQAWIKAVQTSIATAYREKGDES--------------------------EKLDKKSSPSTGSLDSGNESKEKL--------LKGESALQRVQCIPGNASCCDCGLADPRWASINLGITLCIECSGIHRSLGVHFSKVRSLTLD--TWEPELLKLMCELGNDVINRVYE 480
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: ACAP1_BOVIN (Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 OS=Bos taurus GN=ACAP1 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.203e-23 Identity = 79/261 (30.27%), Postives = 121/261 (46.36%), Query Frame = 1 Query: 88 NLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSSQAPERCLPTSPMXXXXXXXXXXXXXXXXXXXXXXXVEEYTSERNLTSAYHEXXXXXXXXXXXCVKSEKPIDV------LRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKY 852 +L T+K+ D S+ RFCF ++SP+K+ LQ++S W+ + S +++ + L SP + + + ++SA + +P V ++ V GN +C DC P P+WAS+NLGV +CI+CSG+HR+LGVH SKVRSLTLD WEP ++ L LGN N ++E +++ + + KP S S KE +IHAKY Sbjct: 311 DLRLCTVKLCPD-SERRFCFEVVSPSKSCLLQSDSERLMQLWVS----AVQSSIATAFSQARLDDSPRG----------------------LGQGSGHLAISSA-------ATLGPGGLTRGREPGGVGHVAAQVQSVDGNAQCCDCREPAPEWASINLGVTLCIQCSGIHRSLGVHFSKVRSLTLD--SWEPELVKLMCELGNVVINQIYEARVEA---------------------MAVKKPGPSCSRQEKEAWIHAKY 514
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: AGAP3_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 OS=Homo sapiens GN=AGAP3 PE=1 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 2.052e-23 Identity = 58/130 (44.62%), Postives = 72/130 (55.38%), Query Frame = 1 Query: 463 IDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKY 852 + +R V GN C DC AP PDWASLNLG L+CIECSG+HR+LG H+S+VRSL LD W P ++ + ++GNA ANSVWE L S KP KE++I AKY Sbjct: 629 VQAVRTVRGNSFCIDCDAPNPDWASLNLGALMCIECSGIHRHLGAHLSRVRSLDLD--DWPPELLAVMTAMGNALANSVWEGALGGYS-----------------------KPGPDACREEKERWIRAKY 733
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: CEG1A_DROME (Centaurin-gamma-1A OS=Drosophila melanogaster GN=cenG1A PE=1 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 2.679e-23 Identity = 59/128 (46.09%), Postives = 75/128 (58.59%), Query Frame = 1 Query: 469 VLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKY 852 + +RV GN C DCGAP P+WASLNLGVL+CIECSGVHRNLG HISKVRSL LD W +++ ++GN+ ANSVWE + R KP+ S KE+++ +KY Sbjct: 707 IRQRVPGNGFCVDCGAPNPEWASLNLGVLMCIECSGVHRNLGSHISKVRSLGLD--DWPSPHLSVMLAIGNSLANSVWESNTRQRV-----------------------KPTSQASREDKERWVRSKY 809
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: ACAP1_HUMAN (Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 OS=Homo sapiens GN=ACAP1 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.499e-23 Identity = 79/261 (30.27%), Postives = 115/261 (44.06%), Query Frame = 1 Query: 88 NLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSSQAPERCLPTSPMXXXXXXXXXXXXXXXXXXXXXXXVEEYTSERNLTSAYHEXXXXXXXXXXXCVKSEKPIDV------LRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKY 852 +L T+K+ D S+ RFCF ++S +K+ LQA+S W+ + S ++S + L SP S + + +P V ++ V GN +C DC P P+WAS+NLGV +CI+CSG+HR+LGVH SKVRSLTLD WEP ++ L LGN N ++E +++ + + KP S S KE +IHAKY Sbjct: 311 DLRLCTVKLCPD-SERRFCFEVVSTSKSCLLQADSERLLQLWVS----AVQSSIASAFSQARLDDSPRGPGQG-----------------------------SGHLAIGSAATLGSGGMARGREPGGVGHVVAQVQSVDGNAQCCDCREPAPEWASINLGVTLCIQCSGIHRSLGVHFSKVRSLTLD--SWEPELVKLMCELGNVIINQIYEARVEA---------------------MAVKKPGPSCSRQEKEAWIHAKY 514
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: AGAP1_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 OS=Homo sapiens GN=AGAP1 PE=1 SV=4) HSP 1 Score: 108.227 bits (269), Expect = 5.969e-23 Identity = 57/127 (44.88%), Postives = 71/127 (55.91%), Query Frame = 1 Query: 472 LRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKY 852 +R + GN C DC P+WASLNLG L+CIECSG+HRNLG H+S+VRSL LD W +I + S+GN ANSVWEE Q R+ KPS + KE++I AKY Sbjct: 615 IRNMRGNSHCVDCETQNPNWASLNLGALMCIECSGIHRNLGTHLSRVRSLDLDD--WPVELIKVMSSIGNELANSVWEESSQGRT-----------------------KPSVDSTREEKERWIRAKY 716
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: AGAP1_XENLA (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 OS=Xenopus laevis GN=agap1 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.796e-23 Identity = 58/127 (45.67%), Postives = 70/127 (55.12%), Query Frame = 1 Query: 472 LRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKY 852 +R + GN C DC A PDWASLNLG L+CIECSG+HRNLG H+S+VRSL LD W P +I + ++GN ANSVWE S HV KP KE++I AKY Sbjct: 618 IRNLPGNSHCVDCDAQSPDWASLNLGALMCIECSGIHRNLGTHLSRVRSLDLD--DWPPELIKVMSAIGNELANSVWE----GSSQGHV-------------------KPCSESPREEKERWIRAKY 719
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: AGAP1_MOUSE (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 OS=Mus musculus GN=Agap1 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.796e-23 Identity = 57/127 (44.88%), Postives = 71/127 (55.91%), Query Frame = 1 Query: 472 LRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKY 852 +R + GN C DC P+WASLNLG L+CIECSG+HRNLG H+S+VRSL LD W +I + S+GN ANSVWEE Q R+ KPS + KE++I AKY Sbjct: 615 IRNMRGNSHCVDCDTQNPNWASLNLGALMCIECSGIHRNLGTHLSRVRSLDLD--DWPMELIKVMSSIGNELANSVWEEGSQGRT-----------------------KPSLDSTREEKERWIRAKY 716
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: AGAP2_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 2.962e-22 Identity = 56/130 (43.08%), Postives = 69/130 (53.08%), Query Frame = 1 Query: 463 IDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKY 852 I +R GN C DCGAP P WASLNLG L+CIECSG+HRNLG H+S+VRSL LD W + + ++GN AN VWE + R+ KPS S +E +I AKY Sbjct: 934 IQAIRNAKGNSICVDCGAPNPTWASLNLGALICIECSGIHRNLGTHLSRVRSLDLD--DWPRELTLVLTAIGNDTANRVWESDTRGRA-----------------------KPSRDSSREERESWIRAKY 1038 The following BLAST results are available for this feature:
BLAST of FC878354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878354 ID=FC878354; Name=FC878354; organism=Citrus clementina; type=EST; length=852bpback to top |