FC878354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: AGD15_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD15 OS=Arabidopsis thaliana GN=AGD15 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.830e-19 Identity = 43/89 (48.31%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 448 KSEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELL 714 K K ++ L + N CADC + P WAS+NLG+ +C++CSG+HR+LGVHIS+VRS+TLD W P + +S GNA N WE L Sbjct: 14 KHSKILEALLKHPDNRECADCRSKAPRWASVNLGIFICMQCSGIHRSLGVHISQVRSITLD--TWLPDQVAFMKSTGNAKGNEYWESEL 100
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: AGAP7_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 7 OS=Homo sapiens GN=AGAP7 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.920e-19 Identity = 50/127 (39.37%), Postives = 68/127 (53.54%), Query Frame = 1 Query: 472 LRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKY 852 ++ + GN C DC P WASLNLGVL+CIECSG+HR+LG +S+VRSL LD W + + S+GN ANS+WE Q R+ KP+ + KE++I +KY Sbjct: 447 IQNMRGNAHCVDCETQNPKWASLNLGVLMCIECSGIHRSLGTRLSRVRSLELD--DWPVELRKVMSSIGNDLANSIWEGSSQGRT-----------------------KPTEKSTREEKERWIRSKY 548
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: ARAP1_HUMAN (Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 OS=Homo sapiens GN=ARAP1 PE=1 SV=3) HSP 1 Score: 93.9745 bits (232), Expect = 1.165e-18 Identity = 43/87 (49.43%), Postives = 54/87 (62.07%), Query Frame = 1 Query: 490 NDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTP 750 N CADCGAP+PDWAS+NL V++C C+G HR LG +SKVRSL +D KVW ++I LF LGN N W + A +P Sbjct: 547 NRFCADCGAPQPDWASINLCVVICKRCAGEHRGLGAGVSKVRSLKMDRKVWTETLIELFLQLGNGAGNRFWAANVPPSEALQPSSSP 633
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: AGAP4_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 4 OS=Homo sapiens GN=AGAP4 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.165e-18 Identity = 50/127 (39.37%), Postives = 68/127 (53.54%), Query Frame = 1 Query: 472 LRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKY 852 ++ + GN C DC P WASLNLGVL+CIECSG+HR+LG +S+VRSL LD W + + S+GN ANS+WE Q ++ KPS + KE++I +KY Sbjct: 447 IQNMRGNAHCVDCETQNPKWASLNLGVLMCIECSGIHRSLGTRLSRVRSLELD--DWPVELRKVMSSIGNDLANSIWEGSSQGQT-----------------------KPSEKSTREEKERWIRSKY 548
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: AGA11_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 11 OS=Homo sapiens GN=AGAP11 PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.521e-18 Identity = 50/127 (39.37%), Postives = 68/127 (53.54%), Query Frame = 1 Query: 472 LRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKY 852 ++ + GN C DC P WASLNLGVL+CIECSG+HR+LG +S+VRSL LD W + + S+GN ANS+WE Q ++ KPS + KE++I +KY Sbjct: 334 IQNMRGNSHCVDCETQNPKWASLNLGVLMCIECSGIHRSLGTRLSRVRSLELD--DWPVELRKVMSSIGNDLANSIWEGSSQGQT-----------------------KPSIESTREEKERWIRSKY 435
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: ASAP3_MOUSE (Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3 OS=Mus musculus GN=Asap3 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.595e-18 Identity = 52/122 (42.62%), Postives = 66/122 (54.10%), Query Frame = 1 Query: 487 GNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKY 852 GNDRC DCGA +P W S NLGVL CI+CSGVHR LGV S+++SLTLD + PS + L ++GN+ N V E L S + KPS +S + +I AKY Sbjct: 436 GNDRCCDCGAADPTWLSTNLGVLTCIQCSGVHRELGVRFSRIQSLTLD--LLGPSELLLALNIGNSHFNEVMEAHLPSHGS---------------------PKPSAESDMSSRRNYIVAKY 534
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: ARAP2_HUMAN (Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=ARAP2 PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 2.595e-18 Identity = 42/84 (50.00%), Postives = 54/84 (64.29%), Query Frame = 1 Query: 490 NDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVD 741 N CADC AP+PDWAS+NL V++C +C+G HR+LG SKVRSL +D +W +I LF +GN AN W LQ H+D Sbjct: 697 NRSCADCKAPDPDWASINLCVVICKKCAGQHRSLGPKDSKVRSLKMDASIWSNELIELFIVIGNKRANDFWAGNLQKDEELHMD 780
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: AGAP6_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 6 OS=Homo sapiens GN=AGAP6 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.595e-18 Identity = 50/127 (39.37%), Postives = 68/127 (53.54%), Query Frame = 1 Query: 472 LRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKY 852 ++ + GN C DC P WASLNLGVL+CIECSG+HR+LG H+S+VRSL LD W + + S+ N ANS+WE Q ++ KPS + KE++I +KY Sbjct: 447 IQNMRGNAHCVDCETQNPKWASLNLGVLMCIECSGIHRSLGPHLSRVRSLELD--DWPVELRKVMSSIVNDLANSIWEGSSQGQT-----------------------KPSEKSTREEKERWIRSKY 548
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: ARAP3_MOUSE (Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 OS=Mus musculus GN=Arap3 PE=1 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 4.427e-18 Identity = 43/87 (49.43%), Postives = 52/87 (59.77%), Query Frame = 1 Query: 490 NDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTP 750 N CADC A PDWA++NLGV++C +C+G HR LG ISKV+SL LD VW ++ LF LGN AN W L H D P Sbjct: 496 NRHCADCRASRPDWAAVNLGVVICKQCAGQHRALGSGISKVQSLKLDTSVWSNEIVQLFIVLGNDRANCFWAGALPPGEGLHPDSAP 582
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: AGAP8_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 8 OS=Homo sapiens GN=AGAP8 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.427e-18 Identity = 49/127 (38.58%), Postives = 67/127 (52.76%), Query Frame = 1 Query: 472 LRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKY 852 ++ + GN C DC P WASLNLGVL+CIECSG+H +LG +S+VRSL LD W + + S+GN ANS+WE Q ++ KPS + KE++I +KY Sbjct: 447 IQNMRGNAHCVDCETQNPKWASLNLGVLMCIECSGIHHSLGTRLSRVRSLELD--DWPVELRKVMSSIGNDLANSIWEGSSQGQT-----------------------KPSEKSTREEKERWIRSKY 548 The following BLAST results are available for this feature:
BLAST of FC878354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878354 ID=FC878354; Name=FC878354; organism=Citrus clementina; type=EST; length=852bpback to top |