FC878354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: CTLFB_HUMAN (Putative centaurin-gamma-like family member 11P OS=Homo sapiens GN=CTGLF11P PE=5 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 2.197e-17 Identity = 49/127 (38.58%), Postives = 67/127 (52.76%), Query Frame = 1 Query: 472 LRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKY 852 ++ + GN C DC P WASLNLGVL+CIECSG+H +LG +S+VRSL LD W + + S+GN ANS+WE Q ++ KPS + KE++I +KY Sbjct: 455 IQNMRGNAHCVDCETQNPKWASLNLGVLMCIECSGIHCSLGTRLSRVRSLELD--DWPVELRKVMSSIGNDLANSIWEGSSQGQT-----------------------KPSVKSTREEKERWIRSKY 556
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: ARAP1_MOUSE (Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 OS=Mus musculus GN=Arap1 PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 2.197e-17 Identity = 42/87 (48.28%), Postives = 53/87 (60.92%), Query Frame = 1 Query: 490 NDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTP 750 N CADCGA +PDWAS+NL V++C C+G HR LG +SKVRSL +D KVW ++I LF LGN N W + A +P Sbjct: 549 NRFCADCGAAQPDWASINLCVVICKRCAGEHRGLGAGVSKVRSLKMDRKVWTEALIQLFLHLGNGPGNHFWAANVPPSEALEPSSSP 635
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: AGAP9_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 9 OS=Homo sapiens GN=AGAP9 PE=2 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 2.197e-17 Identity = 41/85 (48.24%), Postives = 55/85 (64.71%), Query Frame = 1 Query: 472 LRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRS 726 ++ + GN C DC P WASLNLGVL+CIECSG+HR+ G +S+VRSL LD W + + S+GN ANS+WE Q ++ Sbjct: 515 IQNMRGNAHCVDCETQNPKWASLNLGVLMCIECSGIHRSFGTRLSRVRSLELD--DWPVELRKVMSSIGNELANSIWEGSSQGQT 597
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: AGA10_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 10 OS=Homo sapiens GN=AGAP10 PE=2 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 2.197e-17 Identity = 41/85 (48.24%), Postives = 55/85 (64.71%), Query Frame = 1 Query: 472 LRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRS 726 ++ + GN C DC P WASLNLGVL+CIECSG+HR+ G +S+VRSL LD W + + S+GN ANS+WE Q ++ Sbjct: 470 IQNMRGNAHCVDCETQNPKWASLNLGVLMCIECSGIHRSFGTRLSRVRSLELD--DWPVELRKVMSSIGNELANSIWEGSSQGQT 552
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: CSX2_SCHPO (Protein csx2 OS=Schizosaccharomyces pombe GN=csx2 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.747e-17 Identity = 67/229 (29.26%), Postives = 104/229 (45.41%), Query Frame = 1 Query: 61 EKSAARHT--VNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIA----------SLLSSQAPERCLPTSPMXXXXXXXXXXXXXXXXXXXXXXXVEEYTSERNLTSAYHEXXXXXXXXXXXCVKSEKPIDVLRRVCGNDR-CADCGAP-EPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWE 705 ++S HT ++LL +T++ A +FCF +I+P T QA S + WIE I I+ S+ S + + PTS + V TS S E KS + L+ + +D+ CADC +W ++N V++CI+CSG+HR+LG HI+K+RSLTLD + P + L + GN+F N ++E Sbjct: 554 KQSLELHTEPIDLLMATVR-PAQSVSRKFCFEVITPQTKRTYQATSKAEMHSWIEAIQYSISESIVQKGKGTSMNSEETSVKHGPTSTIGKALQR-----------------VASVTSPSRHNSDSKEKKQ---------TKSPSLVKTLKEMHSSDQSCADCNTTARVEWCAINFPVVLCIDCSGIHRSLGTHITKIRSLTLD--KFNPETVDLLYATGNSFVNEIYE 753
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: ARAP2_MOUSE (Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2 OS=Mus musculus GN=Arap2 PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 3.747e-17 Identity = 41/84 (48.81%), Postives = 52/84 (61.90%), Query Frame = 1 Query: 490 NDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVD 741 N CADC AP+PDWAS+NL V++C +C+G HR+LG KVRSL +D +W +I LF +GN AN W LQ VD Sbjct: 695 NRSCADCKAPDPDWASINLCVVICKKCAGQHRSLGPKDCKVRSLKMDASIWSNELIELFIVIGNKRANDFWAGNLQKDEELQVD 778
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: AGAP5_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 5 OS=Homo sapiens GN=AGAP5 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.894e-17 Identity = 49/127 (38.58%), Postives = 67/127 (52.76%), Query Frame = 1 Query: 472 LRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKY 852 ++ + GN C D P WASLNLGVL+CIECSG+HR+LG +S+VRSL LD W + + S+GN ANS+WE Q ++ KPS + KE++I +KY Sbjct: 447 IQNMRGNAHCVDYETQNPKWASLNLGVLMCIECSGIHRSLGTRLSRVRSLELD--DWPVELRKVMSSIGNDLANSIWEGSSQGQT-----------------------KPSVKSTREEKERWIRSKY 548
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: AGD12_ARATH (ADP-ribosylation factor GTPase-activating protein AGD12 OS=Arabidopsis thaliana GN=AGD12 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.424e-16 Identity = 42/81 (51.85%), Postives = 57/81 (70.37%), Query Frame = 1 Query: 490 NDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVW-EPSVITLFQSLGNAFANSVWEELLQSRSA 729 N CADCGAP+P WAS N+GV +C++C GVHR+LG HISKV S+TLD W + V ++ + GNA ANS++E + S+ Sbjct: 27 NRVCADCGAPDPKWASANIGVFICLKCCGVHRSLGSHISKVLSVTLD--EWSDEEVDSMIEIGGNASANSIYEAFIPEGSS 105
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: ASAP3_HUMAN (Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3 OS=Homo sapiens GN=ASAP3 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.860e-16 Identity = 49/122 (40.16%), Postives = 62/122 (50.82%), Query Frame = 1 Query: 487 GNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKY 852 GN +C DCGA +P W S NLGVL CI+CSGVHR LGV S+++SLTLD + PS + L ++GN N V E L S KPS + + +I AKY Sbjct: 437 GNSQCCDCGAADPTWLSTNLGVLTCIQCSGVHRELGVRFSRMQSLTLD--LLGPSELLLALNMGNTSFNEVMEAQLPSHGG---------------------PKPSAESDMGTRRDYIMAKY 535
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: ADAP1_HUMAN (Arf-GAP with dual PH domain-containing protein 1 OS=Homo sapiens GN=ADAP1 PE=1 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 4.143e-16 Identity = 50/130 (38.46%), Postives = 74/130 (56.92%), Query Frame = 1 Query: 463 IDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKY 852 +++L+R GN RCADCGAP+PDWAS LGV +C+ CSG+HRN+ +SKV+S+ LD WE + + S GN A + +E + PS + +P+ SD ++E++I AKY Sbjct: 10 LELLQRP-GNARCADCGAPDPDWASYTLGVFICLSCSGIHRNI-PQVSKVKSVRLD--AWEEAQVEFMASHGNDAARARFESKV------------PSFYY----------RPTPSDCQLLREQWIRAKY 113 The following BLAST results are available for this feature:
BLAST of FC878354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878354 ID=FC878354; Name=FC878354; organism=Citrus clementina; type=EST; length=852bpback to top |