FC878354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: AGD13_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD13 OS=Arabidopsis thaliana GN=AGD13 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.067e-16 Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 1 Query: 490 NDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVW-EPSVITLFQSLGNAFANSVWEELL 714 N CADCGA +P WAS N+GV +C++C GVHR+LG HISKV S+TLD W + V ++ + GNA ANS++E L Sbjct: 27 NRVCADCGASDPKWASANIGVFICLKCCGVHRSLGTHISKVLSVTLD--EWSDEEVDSMIEIGGNASANSIYEAFL 100
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: SMAP2_CHICK (Stromal membrane-associated protein 2 OS=Gallus gallus GN=SMAP2 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.230e-16 Identity = 39/75 (52.00%), Postives = 49/75 (65.33%), Query Frame = 1 Query: 490 NDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELL 714 N CADC A P WAS N+GV +CI C+G+HRNLGVHIS+V+S+ LD W I Q +GN AN ++E L Sbjct: 25 NKYCADCQAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLD--QWTQEQIQCMQEMGNGKANRLYEAFL 97
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: SMAP1_MOUSE (Stromal membrane-associated protein 1 OS=Mus musculus GN=Smap1 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.574e-15 Identity = 38/72 (52.78%), Postives = 48/72 (66.67%), Query Frame = 1 Query: 490 NDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWE 705 N CADC A P WAS N+GV +CI C+G+HRNLGVHIS+V+S+ LD W P I Q +GN A ++E Sbjct: 30 NKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLD--QWTPEQIQCMQDMGNTKARLLYE 99
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: GIT2_MOUSE (ARF GTPase-activating protein GIT2 OS=Mus musculus GN=Git2 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.574e-15 Identity = 48/127 (37.80%), Postives = 68/127 (53.54%), Query Frame = 1 Query: 475 RRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISV-KEKFIHAKY 852 +R+ +D CADC P+P WAS+N G +C EC VHR+LG HIS+VR L W P+++ + ++L N ANS+WE H L P S+ + K + D + K +FI AKY Sbjct: 3 KRLRSSDVCADCNGPDPSWASVNRGTFICDECCSVHRSLGRHISQVRH--LKHTAWPPTLLQMVETLYNNGANSIWE---------HSLLDPASIMSGRR-------KANPQDKVHPNKAEFIRAKY 111
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: SMAP2_MOUSE (Stromal membrane-associated protein 2 OS=Mus musculus GN=Smap2 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.686e-15 Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = 1 Query: 448 KSEKPIDVLRRVCGN-------DRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELL 714 KS K +D + V N CADC + P WAS N+GV +CI C+G+HRNLGVHIS+V+S+ LD W I Q +GN AN ++E L Sbjct: 4 KSVKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLD--QWTQEQIQCMQEMGNGKANRLYEAYL 97
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: SMAP2_HUMAN (Stromal membrane-associated protein 2 OS=Homo sapiens GN=SMAP2 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.686e-15 Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = 1 Query: 448 KSEKPIDVLRRVCGN-------DRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELL 714 KS K +D + V N CADC + P WAS N+GV +CI C+G+HRNLGVHIS+V+S+ LD W I Q +GN AN ++E L Sbjct: 4 KSVKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLD--QWTQEQIQCMQEMGNGKANRLYEAYL 97
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: SMAP2_BOVIN (Stromal membrane-associated protein 2 OS=Bos taurus GN=SMAP2 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.686e-15 Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = 1 Query: 448 KSEKPIDVLRRVCGN-------DRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELL 714 KS K +D + V N CADC + P WAS N+GV +CI C+G+HRNLGVHIS+V+S+ LD W I Q +GN AN ++E L Sbjct: 4 KSVKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLD--QWTQEQIQCMQEMGNGKANRLYEAYL 97
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: AGD11_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD11 OS=Arabidopsis thaliana GN=AGD11 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.686e-15 Identity = 39/63 (61.90%), Postives = 47/63 (74.60%), Query Frame = 1 Query: 451 SEKPIDVLRRVC---GNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLD 630 S P D L ++ GN CADCG+PEP W SL+LGV +CI+CSGVHR+LGVHISKV S+ LD Sbjct: 43 SSDPRDRLEKLLKQPGNKYCADCGSPEPKWVSLSLGVFICIKCSGVHRSLGVHISKVLSVKLD 105
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: GCS1_YEAST (ADP-ribosylation factor GTPase-activating protein GCS1 OS=Saccharomyces cerevisiae GN=GCS1 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.508e-15 Identity = 40/102 (39.22%), Postives = 60/102 (58.82%), Query Frame = 1 Query: 472 LRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKP 777 L+++ N +C DCGAP P WA+ G +C+EC+G+HR LGVHIS VRS+T+D ++P + + GN E L + + ++DL+ P K D P Sbjct: 17 LQKIGANKKCMDCGAPNPQWATPKFGAFICLECAGIHRGLGVHISFVRSITMD--QFKPEELLRMEKGGN-------EPLTEWFKSHNIDLSLPQKVKYDNP 109
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: SMAP1_HUMAN (Stromal membrane-associated protein 1 OS=Homo sapiens GN=SMAP1 PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.333e-14 Identity = 37/72 (51.39%), Postives = 47/72 (65.28%), Query Frame = 1 Query: 490 NDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWE 705 N CADC A P WAS N+GV +CI C+G+HRNLGVHIS+V+S+ LD W I Q +GN A ++E Sbjct: 30 NKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLD--QWTAEQIQCMQDMGNTKARLLYE 99 The following BLAST results are available for this feature:
BLAST of FC878354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878354 ID=FC878354; Name=FC878354; organism=Citrus clementina; type=EST; length=852bpback to top |