FC878354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: GIT2_HUMAN (ARF GTPase-activating protein GIT2 OS=Homo sapiens GN=GIT2 PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.333e-14 Identity = 47/127 (37.01%), Postives = 68/127 (53.54%), Query Frame = 1 Query: 475 RRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISV-KEKFIHAKY 852 +R+ ++ CADC P+P WAS+N G +C EC VHR+LG HIS+VR L W P+++ + ++L N ANS+WE H L P S+ + K + D + K +FI AKY Sbjct: 3 KRLRSSEVCADCSGPDPSWASVNRGTFLCDECCSVHRSLGRHISQVRH--LKHTPWPPTLLQMVETLYNNGANSIWE---------HSLLDPASIMSGRR-------KANPQDKVHPNKAEFIRAKY 111
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: GIT1_RAT (ARF GTPase-activating protein GIT1 OS=Rattus norvegicus GN=Git1 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.333e-14 Identity = 46/119 (38.66%), Postives = 64/119 (53.78%), Query Frame = 1 Query: 499 CADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSI-SVKEKFIHAKY 852 CADC AP+P WAS++ GVLVC EC VHR+LG HIS V+ L W P+++ + +L + ANS+WE H L P + + K + D + +K +FI AKY Sbjct: 11 CADCSAPDPGWASISRGVLVCDECCSVHRSLGRHISIVKHLR--HSAWPPTLLQMVHTLASNGANSIWE---------HSLLDPAQVQSGRR-------KANPQDKVHPIKSEFIRAKY 111
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: GIT1_MOUSE (ARF GTPase-activating protein GIT1 OS=Mus musculus GN=Git1 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.333e-14 Identity = 46/119 (38.66%), Postives = 64/119 (53.78%), Query Frame = 1 Query: 499 CADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSI-SVKEKFIHAKY 852 CADC AP+P WAS++ GVLVC EC VHR+LG HIS V+ L W P+++ + +L + ANS+WE H L P + + K + D + +K +FI AKY Sbjct: 11 CADCSAPDPGWASISRGVLVCDECCSVHRSLGRHISIVKHLR--HSAWPPTLLQMVHTLASNGANSIWE---------HSLLDPAQVQSGRR-------KANPQDKVHPIKSEFIRAKY 111
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: GIT1_HUMAN (ARF GTPase-activating protein GIT1 OS=Homo sapiens GN=GIT1 PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.333e-14 Identity = 46/119 (38.66%), Postives = 64/119 (53.78%), Query Frame = 1 Query: 499 CADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSI-SVKEKFIHAKY 852 CADC AP+P WAS++ GVLVC EC VHR+LG HIS V+ L W P+++ + +L + ANS+WE H L P + + K + D + +K +FI AKY Sbjct: 11 CADCSAPDPGWASISRGVLVCDECCSVHRSLGRHISIVKHLR--HSAWPPTLLQMVHTLASNGANSIWE---------HSLLDPAQVQSGRR-------KANPQDKVHPIKSEFIRAKY 111
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: AGE2_YEAST (ADP-ribosylation factor GTPase-activating protein effector protein 2 OS=Saccharomyces cerevisiae GN=AGE2 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.333e-14 Identity = 44/92 (47.83%), Postives = 57/92 (61.96%), Query Frame = 1 Query: 445 VKSEKPIDVLRRVCGNDRCADCGAP-EPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVW-EPSVITLFQSLGNAFANSVWEELL 714 V +K + L R GN CADC A P WAS +LGV +CI+C+G+HR+LG HISKV+S+ LD W E ++ L Q N ANS +E L Sbjct: 5 VPVKKALSALLRDPGNSHCADCKAQLHPRWASWSLGVFICIKCAGIHRSLGTHISKVKSVDLD--TWKEEHLVKLIQFKNNLRANSYYEATL 94
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: YAUA_SCHPO (Uncharacterized protein C26A3.10 OS=Schizosaccharomyces pombe GN=SPAC26A3.10 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.274e-14 Identity = 75/259 (28.96%), Postives = 108/259 (41.70%), Query Frame = 1 Query: 136 RFCFRIISPTKNYTLQAESALDQMDWIEKITGV----------IASLLSSQA--PERCLP-------TSPMXXXXXXXXXXXXXXXXXXXXXXXVEEYTSERNLTSAYHEXXXXXXXXXXXCVKSEKPIDVLRRVCGNDRCADCGA-PEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKY 852 RFCF +++P QA SA + WIE I +A+ LS+ P + P T+P+ ++++ N + + E ++ + DV N CADCG+ + W S+N+ V++CIECSG+HR+LG HISK RSL LD + V L +GNA N V+E+ L+ PSL KP KP H + VK F KY Sbjct: 598 RFCFEVVTPKLKRLYQATSAEEMDSWIEAICEAAKISSFQLSRVATPLSASVRRPSKVFPLFSTSFETTPISRKLSGSGIKKAFSRKGSWN---LQQFFRSDNSGTMHMEQLERYHASANIFIQMLRKTDV-----SNSVCADCGSVKDVTWCSINIPVVLCIECSGIHRSLGTHISKTRSLLLDSLSQQSKV--LLCKIGNAAVNRVYEK----------GLSNPSL----KP------KPEH--NAQVKLAFAQKKY 824
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: ADAP2_RAT (Arf-GAP with dual PH domain-containing protein 2 OS=Rattus norvegicus GN=Adap2 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.615e-14 Identity = 46/122 (37.70%), Postives = 64/122 (52.46%), Query Frame = 1 Query: 487 GNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKY 852 GN CADCGA +PDWAS LGV +C+ CSGVHRN ISKV+S+ LD W+ S++ GN + +E + + ++V P SD + +KE++I AKY Sbjct: 21 GNGHCADCGAADPDWASYKLGVFICLHCSGVHRNF-PDISKVKSVRLD--FWDDSMVEFMTHNGNLSVKAKFEARVP--TFYYV--------------------PQASDCLVLKEQWIRAKY 117
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: ADAP2_MOUSE (Arf-GAP with dual PH domain-containing protein 2 OS=Mus musculus GN=Adap2 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.925e-13 Identity = 45/122 (36.89%), Postives = 63/122 (51.64%), Query Frame = 1 Query: 487 GNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKY 852 GN CADCGA +PDWAS LG+ +C+ CSGVHRN ISKV+S+ LD W+ S++ GN + +E + AF+ P +D + +KE++I AKY Sbjct: 21 GNGHCADCGAADPDWASYKLGIFICLHCSGVHRNF-PDISKVKSVRLD--FWDDSMVEFMTHHGNLNVKAKFEARV---PAFYY-------------------VPQANDCLVLKEQWIRAKY 117
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: ARFG2_XENTR (ADP-ribosylation factor GTPase-activating protein 2 OS=Xenopus tropicalis GN=arfgap2 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.514e-13 Identity = 38/79 (48.10%), Postives = 48/79 (60.76%), Query Frame = 1 Query: 472 LRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEE 708 LR N C DCGA P WAS+ GV +CI+CSGVHR+LGVH+S +RS LD W + Q GNA AN+ + + Sbjct: 17 LRAAPTNKSCFDCGAKNPSWASIPYGVFLCIDCSGVHRSLGVHLSFIRSTELDSN-WSWFQLRCMQVGGNASANAFFHQ 94
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: ARFG2_BOVIN (ADP-ribosylation factor GTPase-activating protein 2 OS=Bos taurus GN=ARFGAP2 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.514e-13 Identity = 37/79 (46.84%), Postives = 48/79 (60.76%), Query Frame = 1 Query: 472 LRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEE 708 LR + N C DCGA P WAS+ GV +CI+CSGVHR+LGVH+S +RS LD W + Q GNA A + + + Sbjct: 17 LRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELD-STWSWFQLRCMQVGGNANATAFFRQ 94 The following BLAST results are available for this feature:
BLAST of FC878354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878354 ID=FC878354; Name=FC878354; organism=Citrus clementina; type=EST; length=852bpback to top |