FC878354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: ARFG3_BOVIN (ADP-ribosylation factor GTPase-activating protein 3 OS=Bos taurus GN=ARFGAP3 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 9.552e-13 Identity = 38/79 (48.10%), Postives = 48/79 (60.76%), Query Frame = 1 Query: 472 LRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEE 708 LR V N C DCGA P WAS+ GV +CI+CSG HR+LGVH+S +RS LD W + Q GNA A+S + + Sbjct: 16 LRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTELDSN-WSWFQLRCMQVGGNANASSFFHQ 93
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: YIQ9_SCHPO (Uncharacterized protein C824.09c OS=Schizosaccharomyces pombe GN=SPAC824.09c PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.629e-12 Identity = 39/76 (51.32%), Postives = 45/76 (59.21%), Query Frame = 1 Query: 490 NDRCADCGAPE-PDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELL 714 N CADC E P WAS NLGV +CI CSGVHR+LGVH+S+V+S+ LD W GN AN WE L Sbjct: 25 NKVCADCKRNEQPRWASWNLGVFICIRCSGVHRSLGVHVSRVKSVDLD--SWTDEQTENMTRWGNERANLYWEAKL 98
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: ARFG3_MOUSE (ADP-ribosylation factor GTPase-activating protein 3 OS=Mus musculus GN=Arfgap3 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.629e-12 Identity = 37/79 (46.84%), Postives = 49/79 (62.03%), Query Frame = 1 Query: 472 LRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEE 708 LR V N C DCGA P WAS++ GV +CI+CSG HR+LGVH+S +RS LD W + Q GN+ A+S + + Sbjct: 16 LRSVPTNKVCFDCGAKNPSWASISYGVFLCIDCSGSHRSLGVHLSFIRSTELDSN-WSWFQLRCMQVGGNSNASSFFHQ 93
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: ADAP2_HUMAN (Arf-GAP with dual PH domain-containing protein 2 OS=Homo sapiens GN=ADAP2 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.779e-12 Identity = 43/122 (35.25%), Postives = 62/122 (50.82%), Query Frame = 1 Query: 487 GNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKY 852 GN CADCGA +PDWAS LG+ +C+ C GVHRN IS+V+S+ LD W+ S++ GN + +E + AF+ P +D + +KE++I AKY Sbjct: 21 GNAHCADCGAADPDWASYKLGIFICLNCCGVHRNF-PDISRVKSVRLD--FWDDSIVEFMIHNGNLRVKAKFEARV---PAFYY-------------------IPQANDCLVLKEQWIRAKY 117
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: YQP4_CAEEL (Uncharacterized protein F07F6.4 OS=Caenorhabditis elegans GN=F07F6.4 PE=4 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 3.073e-11 Identity = 34/78 (43.59%), Postives = 45/78 (57.69%), Query Frame = 1 Query: 472 LRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWE 705 +R + N C DCGA P W ++ GV +CI+CS VHRNLGVH++ VRS LD W + Q GN AN ++ Sbjct: 19 MRALPPNKLCFDCGARNPTWCTVTYGVFLCIDCSAVHRNLGVHLTFVRSTNLDTN-WTWLQLRAMQLGGNGNANQFFK 95
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: AGE1_YEAST (ADP-ribosylation factor GTPase-activating protein effector protein 1 OS=Saccharomyces cerevisiae GN=AGE1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.073e-11 Identity = 35/88 (39.77%), Postives = 58/88 (65.91%), Query Frame = 1 Query: 463 IDVLRRVC-GNDRCADCGAPEP-DWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQS 720 + ++R++ N +C DCG+ +W S+NL ++CI+CSGVHR+LG HISK+RSLTLD + L ++ N+ N+++E L++ Sbjct: 173 LSIVRKIDKSNLKCCDCGSTATVEWVSINLLCILCIKCSGVHRSLGSHISKIRSLTLDNFTSLELMHLLQNNVSNSNVNAIYESNLRN 260
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: AGD6_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD6 OS=Arabidopsis thaliana GN=AGD6 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.241e-11 Identity = 32/73 (43.84%), Postives = 43/73 (58.90%), Query Frame = 1 Query: 490 NDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEE 708 N C DC P WAS++ G+ +C+ECSG HR LGVHIS VRS+T+D W I ++ GN N + + Sbjct: 16 NKVCVDCAQKNPQWASVSYGIFMCLECSGKHRGLGVHISFVRSVTMD--SWSAIQIKKMEAGGNERLNKFFAQ 86
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: ARFG1_RAT (ADP-ribosylation factor GTPase-activating protein 1 OS=Rattus norvegicus GN=Arfgap1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.845e-11 Identity = 32/79 (40.51%), Postives = 49/79 (62.03%), Query Frame = 1 Query: 448 KSEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNA 684 ++ K + +R N+ C +CGA P W S+ G+ +C+ECSG HR LGVH+S VRS+T+D W+ + ++ GNA Sbjct: 5 RTRKVLKEVRAQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMD--KWKDIELEKMKAGGNA 81
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: ARFG1_MOUSE (ADP-ribosylation factor GTPase-activating protein 1 OS=Mus musculus GN=Arfgap1 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 6.845e-11 Identity = 32/79 (40.51%), Postives = 49/79 (62.03%), Query Frame = 1 Query: 448 KSEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNA 684 ++ K + +R N+ C +CGA P W S+ G+ +C+ECSG HR LGVH+S VRS+T+D W+ + ++ GNA Sbjct: 5 RTRKVLKEVRAQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMD--KWKDIELEKMKAGGNA 81
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: AGD8_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD8 OS=Arabidopsis thaliana GN=AGD8 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.845e-11 Identity = 32/64 (50.00%), Postives = 37/64 (57.81%), Query Frame = 1 Query: 490 NDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGN 681 N C DC A P WAS+ G+ +CI+CS HRNLGVHIS VRS LD W P + GN Sbjct: 25 NKVCFDCSAKNPTWASVTYGIFLCIDCSATHRNLGVHISFVRSTNLD--SWSPEQLRTMMFGGN 86 The following BLAST results are available for this feature:
BLAST of FC878354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878354 ID=FC878354; Name=FC878354; organism=Citrus clementina; type=EST; length=852bpback to top |