FC878360

Overview
NameFC878360
Unique NameFC878360
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length863
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878360 vs. ExPASy Swiss-Prot
Match: VRAB_STAAM (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=vraB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.404e-11
Identity = 60/205 (29.27%), Postives = 95/205 (46.34%), Query Frame = 3
Query:  201 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT--------VNSI--SVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTK 785
            +  VIVAA RTA  K   G  K    + LL P+ +   EK     S++ D+V+G V+  G   A   R A   AG  +++P  T++RQC SGL++V      I+AG   + IA G+ES +         +S+  + + +   +     +  D  +  G  +ENVA+ + V+R+ QD                G    EI+P+  K
Sbjct:    2 NQAVIVAAKRTAFGKYG-GTLKHLEPEQLLKPLFQHFKEKYPEVISKIDDVVLGNVVGNGGNIA---RKALLEAGLKDSIPGVTIDRQCGSGLESVQYACRMIQAGAGKVYIAGGVESTSRAPWKIKRPHSVYETALPEFYERASFAPEMSDPSMIQG--AENVAKMYDVSRELQDEFAYRSHQLTAENVKNGNISQEILPITVK 200          
BLAST of FC878360 vs. ExPASy Swiss-Prot
Match: VRAB_STAA1 (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=vraB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.404e-11
Identity = 60/205 (29.27%), Postives = 95/205 (46.34%), Query Frame = 3
Query:  201 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT--------VNSI--SVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTK 785
            +  VIVAA RTA  K   G  K    + LL P+ +   EK     S++ D+V+G V+  G   A   R A   AG  +++P  T++RQC SGL++V      I+AG   + IA G+ES +         +S+  + + +   +     +  D  +  G  +ENVA+ + V+R+ QD                G    EI+P+  K
Sbjct:    2 NQAVIVAAKRTAFGKYG-GTLKHLEPEQLLKPLFQHFKEKYPEVISKIDDVVLGNVVGNGGNIA---RKALLEAGLKDSIPGVTIDRQCGSGLESVQYACRMIQAGAGKVYIAGGVESTSRAPWKIKRPHSVYETALPEFYERASFAPEMSDPSMIQG--AENVAKMYDVSRELQDEFAYRSHQLTAENVKNGNISQEILPITVK 200          
BLAST of FC878360 vs. ExPASy Swiss-Prot
Match: VRAB_STAAC (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus aureus (strain COL) GN=vraB PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.085e-11
Identity = 60/205 (29.27%), Postives = 94/205 (45.85%), Query Frame = 3
Query:  201 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT--------VNSI--SVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTK 785
            +  VIVAA RTA  K   G  K    + LL P+ +   EK     S++ D+V+G V+  G   A   R A   AG  +++P  T++RQC SGL++V      I+AG   + IA G+ES +         +S+  + + +   +     +  D  +  G  +ENVA+ + V+R  QD                G    EI+P+  K
Sbjct:    2 NQAVIVAAKRTAFGKYG-GTLKHLEPEQLLKPLFQHFKEKYPEVISKIDDVVLGNVVGNGGNIA---RKALLEAGLKDSIPGVTIDRQCGSGLESVQYACRMIQAGAGKVYIAGGVESTSRAPWKIKRPHSVYETALPEFYERASFAPEMSDPSMIQG--AENVAKMYDVSRGLQDEFAYRSHQLTAENVKNGNISQEILPITVK 200          
BLAST of FC878360 vs. ExPASy Swiss-Prot
Match: THIL_YEAST (Acetyl-CoA acetyltransferase OS=Saccharomyces cerevisiae GN=ERG10 PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 4.085e-11
Identity = 62/207 (29.95%), Postives = 96/207 (46.38%), Query Frame = 3
Query:  204 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPS-EVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT-----VNSISVVGQVNPKVEIFTQARDCL------LPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTK 785
            +V IV+  RT I  + +G      A +L A  LK  + K   L+ S +  +I+ G VL+    +A   R  A  AG    +   TVN+ C+S ++A+   A +IK G  D+ +A G ESMT     + +     +    V +    RD L      L MG+ +E  A+ + +TR++QD                GKF +EI+PV  K
Sbjct:    4 NVYIVSTARTPI-GSFQGSLSSKTAVELGAVALKGALAKVPELDASKDFDEIIFGNVLSANLGQA-PARQVALAAGLSNHIVASTVNKVCASAMKAIILGAQSIKCGNADVVVAGGCESMTNAPYYMPAARAGAKFGQTVLVDGVERDGLNDAYDGLAMGVHAEKCARDWDITREQQDNFAIESYQKSQKSQKEGKFDNEIVPVTIK 208          
BLAST of FC878360 vs. ExPASy Swiss-Prot
Match: THIL_SCHPO (Acetyl-CoA acetyltransferase OS=Schizosaccharomyces pombe GN=erg10 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.968e-11
Identity = 59/208 (28.37%), Postives = 93/208 (44.71%), Query Frame = 3
Query:  204 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAP--GSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT----VNSISVVGQVNPKVEIFT-QARDCL------LPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKI 788
            +V IV+A RT +  +  G F    A  L +  +K  +E+  + PS+V ++ +G V++   G   A +C + A   G P ++   TVN+ C+SG++A    A  I  G  +I +A G ESM+        +  G     VE+     RD L      LPMG  +E  A+   + R  QD                  F+ EI+PV   +
Sbjct:    5 EVYIVSAVRTPM-GSFGGSFASLPATKLGSIAIKGALERVNIKPSDVDEVFMGNVVSANLGQNPARQCALGA---GLPRSIVCTTVNKVCASGMKATILGAQTIMTGNAEIVVAGGTESMSNAPYYAPKNRFGAKYGNVELVDGLLRDGLSDAYDGLPMGNAAELCAEEHSIDRASQDAFAISSYKRAQNAQATKAFEQEIVPVEVPV 208          
BLAST of FC878360 vs. ExPASy Swiss-Prot
Match: THIL_XENTR (Acetyl-CoA acetyltransferase, mitochondrial OS=Xenopus tropicalis GN=acat1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.100e-11
Identity = 52/203 (25.62%), Postives = 94/203 (46.31%), Query Frame = 3
Query:  201 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGIT-----------SENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPV 776
            ++VVI +A RT I  + +G      A  L +  +KA +E+  +   EV ++ +G VL  G  +A   R A   AG   + P  T+N+ C+SG++++   A ++  G   + +A G+ESM+     +     P   +  +  D ++  G+T           +EN A++  ++R+EQD                G   +EI+ V
Sbjct:   33 NEVVIASAARTPI-GSFQGSLSSLPATKLGSIAIKAAVERAGIPGDEVKEVYMGNVLQAGQGQAPS-RQATLGAGLAISTPTTTINKVCASGMKSIMLAAQSLMCGHQQVMVAGGMESMSNVPYCMSRGATPYGGV--KLEDIIVKDGLTDVYNKFHMGNCAENTAKKLSISREEQDSFAINSYTRSKAAWDSGLIANEIVSV 231          
BLAST of FC878360 vs. ExPASy Swiss-Prot
Match: THIL_SACBA (Acetyl-CoA acetyltransferase OS=Saccharomyces bayanus GN=ERG10 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.100e-11
Identity = 63/207 (30.43%), Postives = 95/207 (45.89%), Query Frame = 3
Query:  204 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPS-EVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT-----VNSISVVGQVNPKVEIFTQARDCL------LPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTK 785
            +V IV+  RT I  + +G      A +L A  LK  + K   L+ S +  +I+ G VL+    +A   R  A  AG    +   TVN+ C+S ++A+   A +IK G  D+ +A G ESMT     + +     +    V I    RD L      L MG+ +E  A+ + +TR +QD                GKF +EI+PV  K
Sbjct:    4 NVYIVSTARTPI-GSFQGSLSSKTAVELGAAALKGALAKVPELDASKDFDEIIFGNVLSANLGQA-PARQVALTAGLGNHIVATTVNKVCASAMKAIILGAQSIKCGNADVVVAGGCESMTNAPYYMPAARGGAKFGQTVLIDGVERDGLNDAYDGLAMGVHAEKCARDWDITRDQQDSFAIESYQKSQQSQKEGKFDNEIVPVTIK 208          
The following BLAST results are available for this feature:
BLAST of FC878360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
VRAB_STAAM1.404e-1129.27Putative acetyl-CoA C-acetyltransferase vraB OS=St... [more]
VRAB_STAA11.404e-1129.27Putative acetyl-CoA C-acetyltransferase vraB OS=St... [more]
VRAB_STAAC4.085e-1129.27Putative acetyl-CoA C-acetyltransferase vraB OS=St... [more]
THIL_YEAST4.085e-1129.95Acetyl-CoA acetyltransferase OS=Saccharomyces cere... [more]
THIL_SCHPO6.968e-1128.37Acetyl-CoA acetyltransferase OS=Schizosaccharomyce... [more]
THIL_XENTR9.100e-1125.62Acetyl-CoA acetyltransferase, mitochondrial OS=Xen... [more]
THIL_SACBA9.100e-1130.43Acetyl-CoA acetyltransferase OS=Saccharomyces baya... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA99CG01RM1 IVIA1 Citrus clementina cDNA clone IC0AAA99CG01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878360 ID=FC878360; Name=FC878360; organism=Citrus clementina; type=EST; length=863bp
CTGGTTCTCGATTCATCAGAACTCAAAAGCTTTCCATTGAAACCTGAGAG
TGAGAGATGGAGAAAGCTCTTCACAGACAGAGAATTCTGCTTCAACATCT
TCAACCTTCTTCTTCCCAAACCAGTGACTCGCCGGCTATTTCTGCTTCGA
TTTGTTCGGCTGGTGAAGCTGCAGGATACCATAGGAAGCCTGCTTTCGAT
GATGATGTCGTAATTGTGGCTGCATACCGTACTGCAATTTGCAAGGCGAA
ACGTGGAGGCTTCAAGGATACTCTTGCCGATGATCTGCTTGCACCTGTTC
TAAAGGCAGTGATAGAGAAAACGAGGTTGAATCCCAGTGAAGTAGGGGAT
ATAGTTGTTGGTACAGTCTTGGCACCTGGCTCAACAAGAGCCATGGAGTG
TAGGATGGCAGCGTTCTATGCTGGTTTCCCTGAAACGGTGCCCCTCAGAA
CTGTCAACAGGCAGTGTTCATCTGGCTTGCAGGCGGTTGCTGATGTTGCA
ACAGCTATAAAAGCTGGATTGTATGACATTGGTATTGCTGCTGGATTGGA
AAGCATGACTGTGAATTCTATTAGCGTTGTTGGCCAAGTTAACCCCAAAG
TGGAGATCTTTACTCAAGCTCGGGACTGTCTGCTTCCTATGGGTATCACT
TCTGAAAATGTTGCACAGAGATTTGGTGTGACACGACAAGAGCAAGACCT
GGCTGCCGTTGAATCTCATAGGCGTGCTGCTGCTGCAACTGCATCTGGCA
AGTTTAAAGATGAAATTATTCCAGTGAATACCAAGATTGTGGACCCAAAA
ACTGGAGTGGAGAAGCGTGTCACAATTTCTGTGGATGATGGAATTCGACC
AAACACAACAATT
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