FC878374
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878374 vs. ExPASy Swiss-Prot
Match: MTHR_HUMAN (Methylenetetrahydrofolate reductase OS=Homo sapiens GN=MTHFR PE=1 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 7.877e-17 Identity = 43/114 (37.72%), Postives = 65/114 (57.02%), Query Frame = -2 Query: 30 DKIQEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTAD----LTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDP 359 +K++ ++ S FS EFFPP+T +G NL R DRM A P + D+TW G ++ IA+ N +ET++H+TC +E+I L K G++N++ALRGDP Sbjct: 47 EKMRRRLESGDKWFSLEFFPPRTAEGAVNLISRFDRMAAGGPLYIDVTWHPAGDPGSDKETSSMMIASTAVNYCGLETILHMTCCRQRLEEITGHLHKAKQLGLKNIMALRGDP 160
BLAST of FC878374 vs. ExPASy Swiss-Prot
Match: MTHR_BOVIN (Methylenetetrahydrofolate reductase OS=Bos taurus GN=MTHFR PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.877e-17 Identity = 46/114 (40.35%), Postives = 64/114 (56.14%), Query Frame = -2 Query: 30 DKIQEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTAD----LTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDP 359 +K++ K+ S FS EFFPP+T G NL R DRM A P F D+TW G ++ IA+ N +ET++H+TC + E+I L K G++N+LALRGDP Sbjct: 46 EKMKRKMDSGDKWFSLEFFPPRTAQGAVNLISRFDRMGAGGPLFVDVTWHPAGDPGSDKETSSMVIASTAVNYCGLETILHMTCCHQSREEITGHLNKAKQLGLKNILALRGDP 159
BLAST of FC878374 vs. ExPASy Swiss-Prot
Match: MTHR_MOUSE (Methylenetetrahydrofolate reductase OS=Mus musculus GN=Mthfr PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.029e-16 Identity = 44/114 (38.60%), Postives = 64/114 (56.14%), Query Frame = -2 Query: 30 DKIQEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTAD----LTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDP 359 +K++ ++ S FS EFFPP+T +G NL R DRM A P F D+TW G ++ IA+ N +ET++H+TC E+I L K G++N++ALRGDP Sbjct: 46 EKMRRRMDSGDKWFSLEFFPPRTAEGAVNLISRFDRMAAGGPLFVDVTWHPAGDPGSDKETSSMMIASTAVNYCGLETILHMTCCQQRPEEITGHLHRAKQLGLKNIMALRGDP 159
BLAST of FC878374 vs. ExPASy Swiss-Prot
Match: MTHR_CAEEL (Probable methylenetetrahydrofolate reductase OS=Caenorhabditis elegans GN=C06A8.1 PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 3.098e-13 Identity = 40/120 (33.33%), Postives = 65/120 (54.17%), Query Frame = -2 Query: 15 DKIQEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTADL-----TLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQD 359 ++I+ + + FS EFFPP+ +GV N ER++R+ F D+TW G A++ + IA M + V+TM+H+TC L+ K+ G++++LALRGD P G + Sbjct: 60 ERIERLIDEKQQFFSLEFFPPRFVNGVPNFLERVERLSEGGSVFVDMTWHMGSDPANVDKVTSSSSIAASMLDYCGVDTMLHMTCVQYNKADTLKHLEQAKAMGLRSILALRGDLPPGTE 179
BLAST of FC878374 vs. ExPASy Swiss-Prot
Match: METF_STRLI (5,10-methylenetetrahydrofolate reductase OS=Streptomyces lividans GN=metF PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.177e-12 Identity = 38/109 (34.86%), Postives = 63/109 (57.80%), Query Frame = -2 Query: 27 IQEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPP 353 +++ +A+ K +SFEF PKT G +NL+ + R+ A P F +T+GAGGST T+ ++ + + HLT + V ++ + + GI+N+LA+RGDPP Sbjct: 16 VRDILATGKTTYSFEFSAPKTPKGEKNLWSALRRVEAVAPDFVSVTYGAGGSTRAGTVRETQQIVADTTLTPVAHLTAVDHSVAELRNIIGQYADAGIRNMLAVRGDPP 124
BLAST of FC878374 vs. ExPASy Swiss-Prot
Match: METF_PECCC (5,10-methylenetetrahydrofolate reductase OS=Pectobacterium carotovorum subsp. carotovorum GN=metF PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.537e-12 Identity = 36/101 (35.64%), Postives = 56/101 (55.45%), Query Frame = -2 Query: 27 KVVFSFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPP 329 ++ SFEFFPP+T D E L+ +DR+ + P F +T+GA D T I ++ +E HLTC + E++ Q +GI++++ALRGD P Sbjct: 22 RINVSFEFFPPRTSDMEETLWSSIDRLSSLKPKFVSVTYGANSGERDRTHSIIKTIKERTGLEAAPHLTCIDASREQLREIAQDYWESGIRHIVALRGDLP 122
BLAST of FC878374 vs. ExPASy Swiss-Prot
Match: METF_SHIFL (5,10-methylenetetrahydrofolate reductase OS=Shigella flexneri GN=metF PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.622e-12 Identity = 35/102 (34.31%), Postives = 58/102 (56.86%), Query Frame = -2 Query: 12 SFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDK 317 SFEFFPP+T + + L+ +DR+ + P F +T+GA D T I +++ +E HLTC + +++ + +NGI++++ALRGD P G K Sbjct: 26 SFEFFPPRTSEMEQTLWNSIDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDRTGLEAAPHLTCIDATPDELRTIARDYWNNGIRHIVALRGDLPPGSGK 127
BLAST of FC878374 vs. ExPASy Swiss-Prot
Match: METF_ECOLI (5,10-methylenetetrahydrofolate reductase OS=Escherichia coli (strain K12) GN=metF PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.622e-12 Identity = 35/102 (34.31%), Postives = 58/102 (56.86%), Query Frame = -2 Query: 12 SFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDK 317 SFEFFPP+T + + L+ +DR+ + P F +T+GA D T I +++ +E HLTC + +++ + +NGI++++ALRGD P G K Sbjct: 26 SFEFFPPRTSEMEQTLWNSIDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDRTGLEAAPHLTCIDATPDELRTIARDYWNNGIRHIVALRGDLPPGSGK 127
BLAST of FC878374 vs. ExPASy Swiss-Prot
Match: METF_SALTY (5,10-methylenetetrahydrofolate reductase OS=Salmonella typhimurium GN=metF PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 5.842e-12 Identity = 34/102 (33.33%), Postives = 57/102 (55.88%), Query Frame = -2 Query: 12 SFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDK 317 SFEFFPP+T + + L+ +DR+ + P F +T+GA D T + ++ +E HLTC + +++ + +NGI++++ALRGD P G K Sbjct: 26 SFEFFPPRTSEMEQTLWNSIDRLSSLKPKFVSVTYGANSGERDRTHSVIKGIKERTGLEAAPHLTCIDATRDELRTIARDYWNNGIRHIVALRGDLPPGSGK 127
BLAST of FC878374 vs. ExPASy Swiss-Prot
Match: METF_BUCAP (5,10-methylenetetrahydrofolate reductase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=metF PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.700e-11 Identity = 37/114 (32.46%), Postives = 60/114 (52.63%), Query Frame = -2 Query: 24 DKIQEKVAS--DKVVFSFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPH 359 D I++K+ + DK+ SFEFFPPK D + LF + ++ P +T+GA T I R+ + T HLTC + + ++ + NGI++++ALRGD P+ Sbjct: 10 DIIKKKLENLNDKIQCSFEFFPPKNLDTEKKLFSSVVKLSLLKPFLFSVTYGANSGERKKTYSIVQRIHKKTGITTAPHLTCVDASLSELKEIAKFYWENGIRSIVALRGDVPN 123 The following BLAST results are available for this feature:
BLAST of FC878374 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878374 ID=FC878374; Name=FC878374; organism=Citrus clementina; type=EST; length=609bpback to top |