FC878379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878379 vs. ExPASy Swiss-Prot
Match: MUT11_CHLRE (Protein Mut11 OS=Chlamydomonas reinhardtii GN=Mut11 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.252e-15 Identity = 43/116 (37.07%), Postives = 67/116 (57.76%), Query Frame = 1 Query: 556 IQGHKDSVSNLAFSMEGQLLASGGLDGLVQIWDTSSGNLKCTLEGPGGGVEWVSWHPRGRIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFT-PDGKTICTGSDDATLRV 900 + GH +V+ + FS +G LLASG D V +WD ++G TL G GV V+W+P GR + ++D ++ +W+A+ A L +GH + V C +F G + +GS D TLR+ Sbjct: 36 LSGHTKAVAAVKFSPDGSLLASGSADRTVALWDAATGARVNTLAGHSCGVSDVAWNPNGRYLATAADDHSLKLWDAETGACLRTLTGHTNYVFCCNFDGAAGHLLASGSFDETLRL 151 HSP 2 Score: 78.1814 bits (191), Expect = 7.245e-14 Identity = 49/162 (30.25%), Postives = 78/162 (48.15%), Query Frame = 1 Query: 418 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSNLAFSMEGQLLASGGLDGLVQIWDTSSGNLKCTLEGPGGGVEWVSWH-PRGRIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRV 900 TH SGH+ V +V SP D +L+A+G D W G + + GH VS++A++ G+ LA+ D +++WD +G TL G V ++ G ++ +GS D T+ +W+ L H VT F+ DG + T S D +R+ Sbjct: 33 THALSGHTKAVAAVKFSP-DGSLLASGSADRTVALWDAATGARVNTLAGHSCGVSDVAWNPNGRYLATAADDHSLKLWDAETGACLRTLTGHTNYVFCCNFDGAAGHLLASGSFDETLRLWDVRSGRCLREVPAHSDPVTSAAFSYDGSMVVTSSLDGLIRL 193 HSP 3 Score: 70.0922 bits (170), Expect = 1.973e-11 Identity = 42/168 (25.00%), Postives = 77/168 (45.83%), Query Frame = 1 Query: 430 SGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSNLAFSMEGQLLASGGLDGLVQIWDTSSGN-LKCTLEGPGGGVEWVSWHPRGRIVLAGSEDSTVWMWNADRAAYLNMFS-GHGSSVTC-----------GDFTPDGKTICTGSDDATL 894 +GH++ V+ L+A+G D+ W + G E+ H D V++ AFS +G ++ + LDGL+++WDT +G+ LK + V + ++ P + VL + D +W+ ++ GH ++ C F + TGS+D +L Sbjct: 121 TGHTNYVFCCNFDGAAGHLLASGSFDETLRLWDVRSGRCLREVPAHSDPVTSAAFSYDGSMVVTSSLDGLIRLWDTQTGHCLKTLFDRDSPPVSFAAFTPNAKYVLCNTLDGRAKLWDYAAGRTRRTYAGGHVNTQFCISSGFLGGSSSASFDLGCSMVVTGSEDGSL 288
BLAST of FC878379 vs. ExPASy Swiss-Prot
Match: YH92_CAEEL (Uncharacterized WD repeat-containing protein ZC302.2 OS=Caenorhabditis elegans GN=ZC302.2 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.842e-15 Identity = 44/160 (27.50%), Postives = 87/160 (54.37%), Query Frame = 1 Query: 433 GHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSNLAFSMEGQLLASGGLDGLVQIWDTSSGN-LKCTLEGPGGGVEWVSWHPRGRIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTC---GDFTPDGKTICTGSDDATLRV 900 GH++ V+ + +P ++L+A+ G D+ W G I H D +++++++ +G +A+ DG +++WD +SG+ LK ++ V +V + P G+ +L+ DS++ +W+ +A L ++GH + C P GK I +GS+D + V Sbjct: 295 GHTNYVFCCSFNP-QSSLIASAGFDETVRVWDFKTGLCVKCIPAHSDPITSISYNHDGNTMATSSYDGCIRVWDAASGSCLKTLVDTDHAPVTFVCFSPNGKYLLSAQLDSSLKLWDPKKAKPLKYYNGHKNKKYCLFANMSVPLGKHIISGSEDGRILV 453
BLAST of FC878379 vs. ExPASy Swiss-Prot
Match: COPB2_DICDI (Coatomer subunit beta' OS=Dictyostelium discoideum GN=copb2 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.842e-15 Identity = 52/162 (32.10%), Postives = 76/162 (46.91%), Query Frame = 1 Query: 415 STHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSNLAFSMEGQ--LLASGGLDGLVQIWDTSSGNLKCTLEGPGGGVEWVSWHPRGRIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATL 894 +T +F GHS V S+A +P D AT D W IN ++GH+ ++++ + G+ L SG D LV+IWD S TLEG V V +HP ++L+GSED TV +W++ + V +F I G DD T+ Sbjct: 135 NTQVFEGHSHYVMSIAWNPKDTNQFATASLDKTVKVWSINSPHPHFTLEGHEKGINSVEYFSGGEKPYLISGADDKLVKIWDYQSKTCVQTLEGHSNNVSVVCYHPELPLILSGSEDGTVKLWHSSTYRLERTLNYGMGFVWSMNFLRGSNFIGLGYDDGTV 296
BLAST of FC878379 vs. ExPASy Swiss-Prot
Match: WDR38_MOUSE (WD repeat-containing protein 38 OS=Mus musculus GN=Wdr38 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 5.017e-15 Identity = 45/158 (28.48%), Postives = 74/158 (46.84%), Query Frame = 1 Query: 427 FSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSNLAFSMEGQLLASGGLDGLVQIWDTSSGNLKCTLEGPGGGVEWVSWHPRGRIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRV 900 + H EV A SP TL+ T D + W G + GH+ V + FS +G+L+AS D +++WD + L+G VE VS+ P + + +G D +W +++ GH S+ DF+P ++ TGS D+T+ + Sbjct: 22 YGQHHGEVNCSAFSPDGRTLL-TASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHI 178 HSP 2 Score: 72.0182 bits (175), Expect = 5.192e-12 Identity = 46/163 (28.22%), Postives = 73/163 (44.79%), Query Frame = 1 Query: 421 HIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSNLAFSMEGQLLASGGLDGLVQIWDTSSGNLKCT---LEGPGGGVEWVSWHPRGRIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRV 900 H+ GH V +V+ SP D+ +A+GG D + W + G + GH DS+ + FS LA+G D V IWD + + LEG G + + + G ++ +GS D T+ +W GH V F+PD + + T++V Sbjct: 104 HVLKGHQRSVETVSFSP-DSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASG-LLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKV 264 HSP 3 Score: 69.3218 bits (168), Expect = 3.365e-11 Identity = 47/161 (29.19%), Postives = 78/161 (48.45%), Query Frame = 1 Query: 430 SGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSNLAFSMEGQLLASGGLDGLVQIWDTSSGNLKCTLEGPGGGVEWVSWHPRGRIVLAGSEDSTVWMWNADRA----AYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRV 900 +GH V S SP D L+A+ D W + + ++GH+ SV ++FS + + LASGG D +W+ SG L G ++ + P + GS DSTV +W+ + +Y N+ GH +++C ++ G + +GS D T+ V Sbjct: 65 AGHRGPVKSCCFSP-DGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNL-EGHTGNISCLCYSASG-LLASGSWDKTICV 222
BLAST of FC878379 vs. ExPASy Swiss-Prot
Match: SEL10_CAEEL (F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis elegans GN=sel-10 PE=1 SV=3) HSP 1 Score: 81.6481 bits (200), Expect = 6.553e-15 Identity = 47/159 (29.56%), Postives = 79/159 (49.69%), Query Frame = 1 Query: 424 IFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSNLAFSMEGQLLASGGLDGLVQIWDTSSGNLKCTLEGPGGGVEWVSWHPRGRIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRV 900 + GH D V + C ++ TG D+ W I++G+ + GH V S G+ + SG D V++W T G+L TL+G V ++ G I++ GS D+T+ +W+ + +L GH ++V C F DG T+ +G D T+++ Sbjct: 250 VLRGHEDHV--ITCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAM--AGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKI 402 HSP 2 Score: 68.9366 bits (167), Expect = 4.395e-11 Identity = 45/165 (27.27%), Postives = 75/165 (45.45%), Query Frame = 1 Query: 409 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSNLAFSMEGQLLASGGLDGLVQIWD-TSSGNLKCTLEGPGGGVEWVSWHPRGRIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRV 900 + H+ + H +V C D T V +GG D W + G + GH + V +L F E ++ SG LD +++WD T +C G RG I+++ + DS V +W+ ++M SGH S++T + + T SDD T+++ Sbjct: 366 ESGRHLATLHGHHA-AVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWF-GRNMVATSSDDGTVKL 528
BLAST of FC878379 vs. ExPASy Swiss-Prot
Match: WD51B_MOUSE (WD repeat-containing protein 51B OS=Mus musculus GN=Wdr51b PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.118e-14 Identity = 47/158 (29.75%), Postives = 74/158 (46.84%), Query Frame = 1 Query: 427 FSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSNLAFSMEGQLLASGGLDGLVQIWDTSSGNLKCTLEGPGGGVEWVSWHPRGRIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRV 900 F GH + S SP + +AT D W + A GHKD V++L FS +G LLAS D V++W + V V + G++++ SED ++ +W+ R +L H V C F+PDG+ I + S+D T+++ Sbjct: 14 FKGHKAAITSADFSP-NCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 170
BLAST of FC878379 vs. ExPASy Swiss-Prot
Match: LIS1B_XENLA (Lissencephaly-1 homolog B OS=Xenopus laevis GN=pafah1b1-B PE=2 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 1.907e-14 Identity = 49/160 (30.63%), Postives = 73/160 (45.62%), Query Frame = 1 Query: 421 HIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSNLAFSMEGQLLASGGLDGLVQIWDTSSGNLKCTLEGPGGGVEWVSWHPRGRIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRV 900 + SGH V V P + +V T D W GD+ ++GH DSV +++F G+LLAS D +++WD T+ G V V+ P G +++ S D T+ MW + F+GH V DG I + S+D T+RV Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMV-TASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECLRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260 HSP 2 Score: 70.0922 bits (170), Expect = 1.973e-11 Identity = 47/178 (26.40%), Postives = 79/178 (44.38%), Query Frame = 1 Query: 427 FSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSNLAFSME--------------------GQLLASGGLDGLVQIWDTSSGNLKCTLEGPGGGVEWVSWHPRGRIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRV 900 F+GH + V V + D TL+A+ D W + + +E++ H+ V ++++ E G L SG D +++WD S G TL G V V +HP G+ +L+ ++D T+ +W+ + + H VT DF + TGS D T++V Sbjct: 230 FTGHREWVRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKRSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
BLAST of FC878379 vs. ExPASy Swiss-Prot
Match: GBB1_RAT (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus GN=Gnb1 PE=1 SV=4) HSP 1 Score: 80.1073 bits (196), Expect = 1.907e-14 Identity = 46/163 (28.22%), Postives = 80/163 (49.08%), Query Frame = 1 Query: 418 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSNLAFSMEGQLLASGGLDGLVQIWDTSSGNLKCTLEGPG--GGVEWVSWHPRGRIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRV 900 T F+GH+ +V S++ +P D L +G D W + +G GH+ ++ + F G A+G D +++D + T G+ VS+ GR++LAG +D +W+A +A + +GH + V+C T DG + TGS D+ L++ Sbjct: 177 TTTFTGHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKI 338
BLAST of FC878379 vs. ExPASy Swiss-Prot
Match: GBB1_MOUSE (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Mus musculus GN=Gnb1 PE=1 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 1.907e-14 Identity = 46/163 (28.22%), Postives = 80/163 (49.08%), Query Frame = 1 Query: 418 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSNLAFSMEGQLLASGGLDGLVQIWDTSSGNLKCTLEGPG--GGVEWVSWHPRGRIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRV 900 T F+GH+ +V S++ +P D L +G D W + +G GH+ ++ + F G A+G D +++D + T G+ VS+ GR++LAG +D +W+A +A + +GH + V+C T DG + TGS D+ L++ Sbjct: 177 TTTFTGHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKI 338
BLAST of FC878379 vs. ExPASy Swiss-Prot
Match: GBB1_HUMAN (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Homo sapiens GN=GNB1 PE=1 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 1.907e-14 Identity = 46/163 (28.22%), Postives = 80/163 (49.08%), Query Frame = 1 Query: 418 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSNLAFSMEGQLLASGGLDGLVQIWDTSSGNLKCTLEGPG--GGVEWVSWHPRGRIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRV 900 T F+GH+ +V S++ +P D L +G D W + +G GH+ ++ + F G A+G D +++D + T G+ VS+ GR++LAG +D +W+A +A + +GH + V+C T DG + TGS D+ L++ Sbjct: 177 TTTFTGHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKI 338 The following BLAST results are available for this feature:
BLAST of FC878379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 243
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878379 ID=FC878379; Name=FC878379; organism=Citrus clementina; type=EST; length=900bpback to top |