FC878382
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878382 vs. ExPASy Swiss-Prot
Match: ILVB1_BRANA (Acetolactate synthase 1, chloroplastic OS=Brassica napus PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.829e-19 Identity = 62/209 (29.67%), Postives = 101/209 (48.33%), Query Frame = 2 Query: 149 VRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLP 775 +R + +EQ +GKPGI + SGPG + ++GL++ M+++ P+V I+G ++ G FQE VE + +K D+ ++P+ V + A SGRPG +D+P D+ Q + + Q V S + + V L+ E+K+P++ G G+ + EL + VE TGIP T MG G P Sbjct: 121 IRNVLPRHEQGGVFAAEGYARSSGKPGICIATSGPGATNLVSGLADAMLDSVPLVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVMDVDDIPRIVQEAFFLATSGRPGPVLVDVPKDIQQQL--AIPNWDQPMRLPGYMSRLPQPPEV-SQLGQIVRLISESKRPVLYVGGGS--LNSSEELGRFVELTGIPVASTLMGLGSYP 324
BLAST of FC878382 vs. ExPASy Swiss-Prot
Match: ILVB_ARATH (Acetolactate synthase, chloroplastic OS=Arabidopsis thaliana GN=CSR 1.2 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.075e-19 Identity = 59/209 (28.23%), Postives = 100/209 (47.85%), Query Frame = 2 Query: 149 VRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLP 775 +R + +EQ +GKPGI + SGPG + ++GL++ ++++ P+V I+G ++ G FQE VE + +K D+ ++P+ + + A SGRPG +D+P D+ Q + + +S +++ V L+ E+KKP++ G G + EL + VE TGIP T MG G P Sbjct: 136 IRNVLPRHEQGGVFAAEGYARSSGKPGICIATSGPGATNLVSGLADALLDSVPLVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVMDVEDIPRIIEEAFFLATSGRPGPVLVDVPKDIQQQ---LAIPNWEQAMRLPGYMSRMPKPPEDSHLEQIVRLISESKKPVLYVGGGC--LNSSDELGRFVELTGIPVASTLMGLGSYP 339
BLAST of FC878382 vs. ExPASy Swiss-Prot
Match: ILVI_HAEIN (Acetolactate synthase large subunit OS=Haemophilus influenzae GN=ilvI PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.079e-19 Identity = 71/285 (24.91%), Postives = 116/285 (40.70%), Query Frame = 2 Query: 32 QIDGNTLAAKSLSLFGATHMFGVVGIPVTSLANLAVQLG-VRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLPDTHP-------LXXXXXRSLAIGQCDVALVVGARLN 862 ++ G + +SL G ++FG G V + + LG + I +EQ TGK G +L SGPG + + G+ ++ P+V+ISG G FQE D + +P K + K ++P + + A +GRPG +D+P D ++ TV I KA+ L AKKP++ G GA A +L + + +P + MG G P T + + A+ + D+ L +G R + Sbjct: 3 KLSGAEMVVQSLRDEGVEYVFGYPGGAVLDIYDAIHTLGGIEHILVRHEQAAVHMADGYARSTGKVGCVLVTSGPGATNAITGILTAYTDSVPMVIISGQVMSNLIGSDAFQECDMLGISRPVVKHSFIVKKAEDIPSTLKKAFYIASTGRPGPVVVDIPKDTVNPNFKYPYEYPEYVELRSYNPTVNGH---KGQIKKALKALLVAKKPILFVGGGAITAECSEQLIQFAQRLNLPVTSSLMGLGAYPSTDKQFLGMLGMHGTLEANTAMHESDLILGIGVRFD 284
BLAST of FC878382 vs. ExPASy Swiss-Prot
Match: ILVB_KLEPN (Acetolactate synthase, catabolic OS=Klebsiella pneumoniae GN=budB PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.079e-19 Identity = 58/242 (23.97%), Postives = 101/242 (41.74%), Query Frame = 2 Query: 41 GNTLAAKSLSLFGATHMFGVVGIPVTSLANLAVQLGVRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKG 766 G L L G +FG+ G + + + + +R I +E +TGK G+ L SGPGC + + G++ P+V + G+ + D + Q +D V P +K+A++ + + V+ A GRPG ++ LP DV+ +S G + ID+ L+ +AK P+ + G A+ L++L+E++ IP T G Sbjct: 13 GADLVVSQLEAQGVRQVFGIPGAKIDKVFDSLLDSSIRIIPVRHEANAAFMAAAVGRITGKAGVALVTSGPGCSNLITGMATANSEGDPVVALGGAVKRADKAKQVHQSMDTVAMFSPVTKYAIEVTAPDALAEVVSNAFRAAEQGRPGSAFVSLPQDVVDGPVS--------GKVLPASGAPQMGAAPDDAIDQVAKLIAQAKNPIFLLGLMASQPENSKALRRLLETSHIPVTSTYQAAG 246
BLAST of FC878382 vs. ExPASy Swiss-Prot
Match: ILVB_MYCAV (Acetolactate synthase OS=Mycobacterium avium GN=ilvB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.549e-18 Identity = 67/255 (26.27%), Postives = 110/255 (43.14%), Query Frame = 2 Query: 32 QIDGNTLAAKSLSLFGATHMFGVVGIPVTSLAN-LAVQLGVRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSK---FAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLPDTH 784 Q+ G +SL G +FG+ G V + + L +R + +EQ TGK G+ + SGPG + + L++ +++ P+V ++G + G FQE D P +K V+ ++ P +A+ A SGRP C +D+P DVL + + I + L+ A+KP++ G G A +L++L E TGIP + T M +G PD+H Sbjct: 41 QVTGAQSVIRSLEELGVEVIFGIPGGAVLPVYDPLFDSKKLRHVLVRHEQGAGHAASGYAHATGKVGVCMATSGPGATNLVTALADAQMDSIPVVAVTGQVGRTLIGTDAFQEADISGITMPITKHNFLVVRQRN----PAVLAEAFHIAASGRPARCSVDIPKDVLQGQCTFSWPPRIHLPGYKPTTKPH-----SRQIRERAKLIAAARKPVLYVGGGVIRGEASEQLRELAELTGIPVVTTLMARGAFPDSH 286
BLAST of FC878382 vs. ExPASy Swiss-Prot
Match: ILVB_YEAST (Acetolactate synthase catalytic subunit, mitochondrial OS=Saccharomyces cerevisiae GN=ILV2 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.023e-18 Identity = 67/246 (27.24%), Postives = 106/246 (43.09%), Query Frame = 2 Query: 155 FIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTI--SVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIVFGKGAA-YARAEGELKKLVESTGIPFLPTPMGKGLLPDTHP-------LXXXXXRSLAIGQCDVALVVGARLN 862 F+ +EQ +GKPG++L SGPG + + +++ + P+V+ +G G FQE D V + +K+ V K + E+P + + E A SGRPG +DLP DV + + + + Q V I+KA L+ AKKP++ G G +A LK+L + IP T G G P + +LA+ D+ + VGAR + Sbjct: 133 FVLPKHEQGAGHMAEGYARASGKPGVVLVTSGPGATNVVTPMADAFADGIPMVVFTGQVPTSAIGTDAFQEADVVGISRSCTKWNVMVKSVEELPLRINEAFEIATSGRPGPVLVDLPKDVTAAILRNPIPTKTTLPSNALNQLTSRAQDEFVMQSINKAADLINLAKKPVLYVGAGILNHADGPRLLKELSDRAQIPVTTTLQGLGSFDQEDPKSLDMLGMHGCATANLAVQNADLIIAVGARFD 378
BLAST of FC878382 vs. ExPASy Swiss-Prot
Match: ILVB_ECOLI (Acetolactate synthase isozyme 1 large subunit OS=Escherichia coli (strain K12) GN=ilvB PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.642e-18 Identity = 66/266 (24.81%), Postives = 112/266 (42.11%), Query Frame = 2 Query: 98 VVGIPVTSLAN----LAVQLGVRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLPDTHPL-------XXXXXRSLAIGQCDVALVVGARLN 862 V GIP S+ L+ +R I +EQ GKP + + SGPG + + +++ +++ P++ I+G G FQE+D P +K + I E+P+ ++ A SGRPG ++D+P DV + E I A +++ AK+P++ G G A A +++L E +P T M G+LP HPL + + + D+ +V+GAR + Sbjct: 31 VTGIPGGSILPVYDALSQSTQIRHILARHEQGAGFIAQGMARTDGKPAVCMACSGPGATNLVTAIADARLDSIPLICITGQVPASMIGTDAFQEVDTYGISIPITKHNYLVRHIEELPQVMSDAFRIAQSGRPGPVWIDIPKDVQTAVFEI-------ETQPAMAEKAAAPAFSEESIRDAAAMINAAKRPVLYLGGGVINAPA--RVRELAEKAQLPTTMTLMALGMLPKAHPLSLGMLGMHGVRSTNYILQEADLLIVLGARFD 287
BLAST of FC878382 vs. ExPASy Swiss-Prot
Match: ILVB_CYACA (Acetolactate synthase large subunit OS=Cyanidium caldarium GN=ilvB PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.642e-18 Identity = 58/223 (26.01%), Postives = 103/223 (46.19%), Query Frame = 2 Query: 215 TGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLPDTHPL-------XXXXXRSLAIGQCDVALVVGARLN 862 T + G+ L SGPG + + G++ +++ PI+ I+G + G FQE+D P K + +D ++ V++ + GRPG +D+P DV + + G + I+K +L E+K+P++ G GA +RA+ E+++L IP T MGKG + +PL + A+ +CD+ + +GAR + Sbjct: 74 TNEVGVCLATSGPGATNLVTGIATAQMDSVPIIAITGQVSRAFIGTDAFQEVDIFGITLPIVKHSFVVRDPRDISTIVSEAFYISKHGRPGAVLIDVPKDVGLEEFNYHDYDSIRDHKPITKYRPIYGPSIR-QIEKFKKMLLESKQPILYVGGGAVMSRAQHEIEELASFIKIPVTTTLMGKGSFNEYNPLYLGMLGMHGTAYANFAVSECDLLIALGARFD 295
BLAST of FC878382 vs. ExPASy Swiss-Prot
Match: ILVB1_MAIZE (Acetolactate synthase 1, chloroplastic OS=Zea mays GN=ALS1 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.885e-18 Identity = 63/241 (26.14%), Postives = 112/241 (46.47%), Query Frame = 2 Query: 164 FHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQ-TISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLPDTHPL-------XXXXXRSLAIGQCDVALVVGARLN 862 F +EQ +G+ G+ + SGPG + ++ L++ ++++ P+V I+G ++ G FQE VE + +K D+ ++P+ V + A SGRPG +D+P D+ Q + V + + +++ + L+ E+++P++ G G A A E EL++ VE TGIP T MG G P PL + A+ + D+ L +G R + Sbjct: 109 FRHEQGEAFAASGYARSSGRVGVCIATSGPGATNLVSALADALLDSVPMVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLDVDDIPRVVQEAFFLASSGRPGPVLVDIPKDIQQQMAVPVWDKPMSLPGYIARLPKPPATEL----LEQVLRLVGESRRPVLYVGGGCA-ASGE-ELRRFVELTGIPVTTTLMGLGNFPSDDPLSLRMLGMHGTVYANYAVDKADLLLALGVRFD 343
BLAST of FC878382 vs. ExPASy Swiss-Prot
Match: ILVBL_CAEEL (Acetolactate synthase-like protein OS=Caenorhabditis elegans GN=T26C12.1 PE=2 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 1.004e-17 Identity = 67/311 (21.54%), Postives = 125/311 (40.19%), Query Frame = 2 Query: 2 SSPLQNSQNAQIDGNTLAAKSLSLFGATHMFGVVGIPVTSLANLAVQLGVRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGI---------------------------VNSDIDKAVSLLKEAKKPLIVFGKGAAYARAE-GELKKLVESTGIPFLPTPMGKGLLPDTHPLXXXXXRSLAIGQCDVALVVG 850 S+ Q + ++ G L A L +F + G ++ + A +LG++ + +E L G+ +GPG + + + N + P+++I G+ GRG Q++DQ+ +P K+ + + + ++ V + ++ A SG PG +++ P DVL+ V I+ + + I + V L+K AK+P+++ G A + +L K VE+ G P M +GLL HPL R A+ D+ ++ G Sbjct: 45 SNAFQVDEKSKRHGGELVASVLKAHDVEEIFVLCGGHISPILVAAEKLGIKIVDTRHEVTAVFAADAVARLRQSIGVAAVTAGPGLTNTITAVKNAQMAESPLLLIGGAAPTLLKGRGALQDIDQMVLFRPLCKYVARVERLRDIVPTVREAIKAAKSGCPGPVFVEFPVDVLYPYELVVKEIGFNPNAKGFIQRALNFYLRCHVSRQFGNAWAPQTITPLPTNIPMPKSEKIQEIVQLVKSAKRPVLLIGSQATLPPVKPADLVKAVEALGCPVFLGGMARGLLGKDHPLQMRQVRRDALKDADLTILAG 355 The following BLAST results are available for this feature:
BLAST of FC878382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878382 ID=FC878382; Name=FC878382; organism=Citrus clementina; type=EST; length=864bpback to top |