FC878382
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878382 vs. ExPASy Swiss-Prot
Match: ILVB2_ORYSJ (Probable acetolactate synthase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=ALS2 PE=2 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 1.004e-17 Identity = 60/224 (26.79%), Postives = 107/224 (47.77%), Query Frame = 2 Query: 215 TGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEG-ELKKLVESTGIPFLPTPMGKGLLPDTHPL-------XXXXXRSLAIGQCDVALVVGARLN 862 +G+PG+ + SGPG + ++ L++ +++ P+V I+G ++ G FQE VE + +K D+ ++P+ + + A +GRPG +D+P D+ Q I + + N +D+ + L+ +A++P++ G G + A G EL++ VE TGIP T MG G P PL + A+ D+ L +G R + Sbjct: 146 SGRPGVCVATSGPGATNLVSALADAHLDSVPLVAITGQAPRRMIGTDAFQETPIVEFTRSITKHNYLILDVDDIPRVINEAFFLASTGRPGPVLVDIPKDIQQQ--MAVPSWDAPMRLPGYISRLPKPPAANL-LDEVIRLVGDAERPVLYVGGGCS---ASGYELRRFVELTGIPVTTTLMGIGNFPSDDPLSLRMLGMHGTVYANYAVDNADLLLALGVRFD 363
BLAST of FC878382 vs. ExPASy Swiss-Prot
Match: ILVB2_BRANA (Acetolactate synthase 2, chloroplastic OS=Brassica napus PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.311e-17 Identity = 58/209 (27.75%), Postives = 102/209 (48.80%), Query Frame = 2 Query: 149 VRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLP 775 +R + +EQ +GKPGI + SGPG ++ ++GL++ + ++ P++ I+G ++ G FQE VE + +K ++ ++P+ V + A S RPG +D+P DV Q + T+ + V S +++ + L+ E+K+P++ G G + EL++ VE TGIP T MG G P Sbjct: 112 IRNVLPRHEQGGIFAAEGYARSSGKPGICIATSGPGAMNLVSGLADALFDSVPLIAITGQVPRRMIGTMAFQETPVVEVTRTITKHNYLVMEVDDIPRIVREAFFLATSVRPGPVLIDVPKDVQQQ--FAIPNWEQPMRLPLYMSTMPKPPKV-SHLEQILRLVSESKRPVLYVGGGC--LNSSEELRRFVELTGIPVASTFMGLGSYP 315
BLAST of FC878382 vs. ExPASy Swiss-Prot
Match: ILVB_PORUM (Acetolactate synthase large subunit OS=Porphyra umbilicalis GN=ilvB PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.236e-17 Identity = 67/278 (24.10%), Postives = 120/278 (43.17%), Query Frame = 2 Query: 62 SLSLFGATHMFGVVG---IPVTSLANLAVQLG-VRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLPDTHP-------LXXXXXRSLAIGQCDVALVVGARLN 862 S+ G H+FG G +P+ +L ++ I +EQ TGK G+ SGPG + ++G++ I++ PI+ I+G + G FQE+D P K + +D ++ + VA+ GRPG +D+P DV + + + + I A +++++ +PL+ G GA + A +K+LV+ IP T MGKG+ + + + A+ +CD+ + +GAR + Sbjct: 20 SIVRHGVIHIFGYPGGAILPIYDELYAWEELSLIKNILVRHEQGASHAADAYSRSTGKVGVCFATSGPGATNLVSGIATAHIDSVPILAITGQVGRPFIGTDAFQEVDIFGITLPIVKHSYVVRDPRDMSRIVAEAFYICKHGRPGPVLIDVPKDVGLEKFNYFSVEPGQVKIPGCRPL---SNLKSRQILMAAKMIQQSSQPLLYIGGGAIISDAHSIIKELVDLYKIPVTTTLMGKGIFNEDSEFCLGMLGMHGTAYANFAVSECDLLIALGARFD 294
BLAST of FC878382 vs. ExPASy Swiss-Prot
Match: ILVB_PORPU (Acetolactate synthase large subunit OS=Porphyra purpurea GN=ilvB PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.236e-17 Identity = 67/278 (24.10%), Postives = 120/278 (43.17%), Query Frame = 2 Query: 62 SLSLFGATHMFGVVG---IPVTSLANLAVQLG-VRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLPDTHP-------LXXXXXRSLAIGQCDVALVVGARLN 862 S+ G H+FG G +P+ +L ++ I +EQ TGK G+ SGPG + ++G++ I++ PI+ I+G + G FQE+D P K + +D ++ + VA+ GRPG +D+P DV + + + + I A +++++ +PL+ G GA + A +K+LV+ IP T MGKG+ + + + A+ +CD+ + +GAR + Sbjct: 20 SIVRHGVIHIFGYPGGAILPIYDELYAWEELSLIKNILVRHEQGASHAADAYSRSTGKVGVCFATSGPGATNLVSGIATAHIDSVPILAITGQVGRPFIGTDAFQEVDIFGITLPIVKHSYVVRDPRDMSRIVAEAFYICKHGRPGPVLIDVPKDVGLEKFNYFSVEPGQVKIPGCRPL---SNLKSRQILMAAKMIQQSSQPLLYIGGGAIISDAHSIIKELVDLYKIPVTTTLMGKGIFNEDSEFCLGMLGMHGTAYANFAVSECDLLIALGARFD 294
BLAST of FC878382 vs. ExPASy Swiss-Prot
Match: ILVB2_MAIZE (Acetolactate synthase 2, chloroplastic OS=Zea mays GN=ALS2 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.506e-17 Identity = 63/240 (26.25%), Postives = 109/240 (45.42%), Query Frame = 2 Query: 164 FHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLPDTHPL-------XXXXXRSLAIGQCDVALVVGARLN 862 F +EQ +G+ G+ + SGPG + ++ L++ ++++ P+V I+G ++ G FQE VE + +K D+ ++P+ V + A SGRPG +D+P D+ Q ++V +++ + L+ E+++P++ G G A A E EL + VE TGIP T MG G P PL + A+ + D+ L G R + Sbjct: 109 FRHEQGEAFAASAYARSSGRVGVCIATSGPGATNLVSALADALLDSVPMVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLDVDDIPRVVQEAFFLASSGRPGPVLVDIPKDI-QQQMAVPAWDTPMSLPGYIARLPKPP--ATEFLEQVLRLVGESRRPVLYVGGGCA-ASGE-ELCRFVELTGIPVTTTLMGLGNFPSDDPLSLRMLGMHGTVYANYAVDKADLLLAFGVRFD 343
BLAST of FC878382 vs. ExPASy Swiss-Prot
Match: ILVB_PORYE (Acetolactate synthase large subunit OS=Porphyra yezoensis GN=ilvB PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.498e-17 Identity = 68/296 (22.97%), Postives = 128/296 (43.24%), Query Frame = 2 Query: 8 PLQNSQNAQIDGNTLAAKSLSLFGATHMFGVVG---IPVTSLANLAVQLG-VRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLPDTHP-------LXXXXXRSLAIGQCDVALVVGARLN 862 PL+ +++ G S+ G H+FG G +P+ + ++ I +EQ TG+ G+ SGPG + ++G++ I++ PI+ I+G + G FQE+D P K + +D ++ + VA+ GRPG +D+P DV + + +T + + I A +++++ +PL+ G GA + + +K+LV+ IP T MGKG+ + + + A+ +CD+ + +GAR + Sbjct: 2 PLKQRVSSEKTGAFALLDSIVRHGVKHIFGYPGGAILPIYDELYAWEEASLIKHILVRHEQGAAHAADSYSRSTGEVGVCFATSGPGATNLVSGIATAHIDSVPILAITGQVGRAFIGTDAFQEVDIFGITLPIVKHSYVVRDPRDMSRIVAEAFFICKHGRPGPVLIDVPKDVGLEKFN-YFSVEPGKVNIPGCRPIT--SLKSRQILMAAKMIQQSSQPLLYIGGGAIISDSHQIIKELVDFYKIPVTTTLMGKGIFNEDSDYCLGMLGMHGTAYANFAVSECDLLIALGARFD 294
BLAST of FC878382 vs. ExPASy Swiss-Prot
Match: ILVB1_ORYSJ (Acetolactate synthase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=ALS1 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.498e-17 Identity = 59/241 (24.48%), Postives = 109/241 (45.23%), Query Frame = 2 Query: 164 FHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQ-TISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLPDTHPL-------XXXXXRSLAIGQCDVALVVGARLN 862 F +EQ +G+ G+ + SGPG + ++ L++ ++++ P+V I+G ++ G FQE VE + +K D+ ++P+ + + A SGRPG +D+P D+ Q + V + + +++ + L+ E+++P++ G G + + EL+ VE TGIP T MG G P PL + A+ + D+ L G R + Sbjct: 115 FRHEQGEAFAASGYARASGRVGVCVATSGPGATNLVSALADALLDSVPMVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLDVEDIPRVIQEAFFLASSGRPGPVLVDIPKDIQQQMAVPVWDTSMNLPGYIARLPKPPATEL----LEQVLRLVGESRRPILYVGGGC--SASGDELRWFVELTGIPVTTTLMGLGNFPSDDPLSLRMLGMHGTVYANYAVDKADLLLAFGVRFD 349
BLAST of FC878382 vs. ExPASy Swiss-Prot
Match: XSC_ALCXX (Sulfoacetaldehyde acetyltransferase OS=Alcaligenes xylosoxydans xylosoxydans GN=xsc PE=1 SV=3) HSP 1 Score: 85.1149 bits (209), Expect = 5.508e-16 Identity = 65/268 (24.25%), Postives = 112/268 (41.79%), Query Frame = 2 Query: 77 GATHMFGVVGIPVTSLANLAVQLGVRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLPDTHPL-------XXXXXRSLAIGQCDVALVVGARL 859 G + MFG++G ++ G+R I +EQ ++G+ G+++ +GPG + + G++ P+V+++ G G FQE +Q+ + F+K+ + + + +V +RA+S G L++P D + I V +G + + AV LLK AK P+I+ G G A E K+L E G P + P HPL I Q DV + +G+R+ Sbjct: 30 GVSEMFGIMGSAFMDAMDIFAPAGIRLIPVVHEQGAAHMADGYARVSGRHGVVIGQNGPGISNCVTGIAAAYWAHSPVVIVTPETGTMGMGLGGFQEANQLPMFQEFTKYQGHVCNPKRMAEFTGRVFDRAMS-EMGPTQLNIPRDYFYGEIECEIPKPM---------RVDRGHGGEASLQAAVELLKTAKFPVILAGGGVVMGDAVEEAKQLAERLGAPVATGYLRNDAFPAKHPLWAGPLGYQGSKAAMKLIAQADVVIALGSRM 287
BLAST of FC878382 vs. ExPASy Swiss-Prot
Match: XSC_RHIME (Probable sulfoacetaldehyde acetyltransferase OS=Rhizobium meliloti GN=xsc PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.395e-16 Identity = 69/275 (25.09%), Postives = 114/275 (41.45%), Query Frame = 2 Query: 59 KSLSLFGATHMFGVVGIPVTSLANLAVQLGVRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLPDTH-----PLXXXXXRSL--AIGQCDVALVVGARLN 862 K L + G H FG++G + +++L + G+RF +E TG + + +GPG + + N P++M++ K G+G FQE+DQ+ + + + +D + +P+ + +V+E+A G +++P D Q I V GG + I +A LL EAK P+I+ G G A E L E P P +H PL ++ I + DV L +G RLN Sbjct: 11 KVLQMHGIEHAFGIIGSAMMPVSDLFPKAGIRFWDCAHETNAGMMADGFSRATGTMSMAIGQNGPGVTGFITAMKTAYWNHTPLLMVTPQAANKTIGQGGFQEVDQMAMFEEMVCYQEEVRDPSRIPEVLNRVIEKAWRG-CAPAQINIPRDFWTQVIDVDLPRIVRFER-------PAGG--PAAIAQAARLLSEAKFPVILNGAGVVIGNAIQESMALAEKLDAPVCCGYQHNDAFPGSHRLSVGPLGYNGSKAAMELISKADVVLALGTRLN 275
BLAST of FC878382 vs. ExPASy Swiss-Prot
Match: YDAP_BACSU (Putative thiamine pyrophosphate-containing protein ydaP OS=Bacillus subtilis GN=ydaP PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.954e-15 Identity = 65/273 (23.81%), Postives = 117/273 (42.86%), Query Frame = 2 Query: 65 LSLFGATHMFGVVGIPVTS----LANLAVQLGVRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLPDTHPLXXXXXRSL-------AIGQCDVALVVG 850 L +G H++G+ G + L + QL +FI +E+ LTGK G+ L+++GPG VH L GL + + P++ I+G + GR FQE+ + + + F + +P + Q + A S + G L + D+ + I +E + + + AKKP+I+ G+G +A+ EL + + P + T KG++PD HP + A+ +CD+ +++G Sbjct: 14 LEQWGVDHVYGIPGDSINEFIEELRHERNQL--KFIQTRHEEVAALAAAAEAKLTGKIGVCLSIAGPGAVHLLNGLYDAKADGAPVLAIAGQVSSGEVGRDYFQEIKLEQMFEDVAVFNREVHSAESLPDLLNQAIRTAYS-KKGVAVLSVSDDLFAEKIKREPVYTSPVYIEGNLEPKKE------QLVTCAQYINNAKKPIILAGQG--MKKAKRELLEFADKAAAPIVVTLPAKGVVPDKHPHFLGNLGQIGTKPAYEAMEECDLLIMLG 275 The following BLAST results are available for this feature:
BLAST of FC878382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878382 ID=FC878382; Name=FC878382; organism=Citrus clementina; type=EST; length=864bpback to top |