FC878391

Overview
NameFC878391
Unique NameFC878391
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length877
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4226 contig Ccv1_Contig4226:174..1050. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: RBBP7_HUMAN (Histone-binding protein RBBP7 OS=Homo sapiens GN=RBBP7 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.057e-18
Identity = 49/179 (27.37%), Postives = 86/179 (48.04%), Query Frame = 2
Query:  314 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPT-------SVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 820
            NP   L  H +E +   +N       +++S D TV LW ++          +   F  H+  V +  W+  H  +F S + D  L IWD R   ++    ++ AH  E+    +N Y + ++A+ S DK++ +WD+RN ++ +     H   + +V +SPH   +LAS   D  + +WD
Sbjct:  167 NPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345          

HSP 2 Score: 81.2629 bits (199), Expect = 8.186e-15
Identity = 48/175 (27.43%), Postives = 77/175 (44.00%), Query Frame = 2
Query:  212 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS--------------TMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 691
            V D+AW   H+SL  +   D  + I+DT    T+ P   +  HT EV+   +NP       T S D TV LW + +    + TF+ H   ++   W+P +  +  S+  D  L +WD+ ++G                 I   H  +I    WN  +  +I S S D  ++IW +
Sbjct:  229 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403          
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: RBBP7_BOVIN (Histone-binding protein RBBP7 OS=Bos taurus GN=RBBP7 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.057e-18
Identity = 49/179 (27.37%), Postives = 86/179 (48.04%), Query Frame = 2
Query:  314 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPT-------SVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 820
            NP   L  H +E +   +N       +++S D TV LW ++          +   F  H+  V +  W+  H  +F S + D  L IWD R   ++    ++ AH  E+    +N Y + ++A+ S DK++ +WD+RN ++ +     H   + +V +SPH   +LAS   D  + +WD
Sbjct:  167 NPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345          

HSP 2 Score: 81.2629 bits (199), Expect = 8.186e-15
Identity = 48/175 (27.43%), Postives = 77/175 (44.00%), Query Frame = 2
Query:  212 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS--------------TMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 691
            V D+AW   H+SL  +   D  + I+DT    T+ P   +  HT EV+   +NP       T S D TV LW + +    + TF+ H   ++   W+P +  +  S+  D  L +WD+ ++G                 I   H  +I    WN  +  +I S S D  ++IW +
Sbjct:  229 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403          
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: HAT2_GIBZE (Histone acetyltransferase type B subunit 2 OS=Gibberella zeae GN=HAT2 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.911e-18
Identity = 63/216 (29.17%), Postives = 99/216 (45.83%), Query Frame = 2
Query:  227 WSESHDSLLIAAVADGSVKIYDTA---LPPTA----NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLW---TVDRPTSV----RTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR--EMGSTMIIP--AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 820
            +   +  +L     DG + I+D     L PT+    N    L  H  E    ++NP       + S D T++LW   T+   + +    RT++ H   V +  ++P   +   S S D TL+I D+R  E     ++    H   I A  +N   + L+A+AS DK+I IWD+RN +  +  L GH  AV  + + P    +L S SYD  +  WD
Sbjct:  131 YQPQNPDILATLCVDGKILIFDRTKHPLDPTSTGKVNAQIELVGHEAEGFGLNWNPHEEGCLASGSEDTTMRLWDLKTLKADSRILNPSRTYRHHTQIVNDVQYHPISKNFIGSVSDDQTLQIVDIRHSETNKAAVVAKRGHLDAINALAFNPNSEVLVATASADKTIGIWDLRNVKEKVHTLEGHNDAVTSLAWHPTEAGILGSASYDRRIIFWD 346          
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: WDR24_DANRE (WD repeat-containing protein 24 OS=Danio rerio GN=wdr24 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.033e-17
Identity = 53/204 (25.98%), Postives = 99/204 (48.53%), Query Frame = 2
Query:  218 DLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS-TMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCS--YDMTVCLWD 820
            D+ W +  ++LL  A  +G+V  ++ + P      +   EH R V+   ++PT  +  ++ S D  +K + + +  SV TF   +  V +  ++ +    F ++  +  +++WD+R       +  AH   +  CDW+  D   +A+   DK +K+WD+   RV          +V +VK+ P RR  LA+CS   D  + +WD
Sbjct:   73 DVMWHQMEENLLATAATNGAVVTWNLSRPCRNKQEQLFTEHKRTVNKVCFHPTEVNMLLSGSQDGFMKCFDLRKKESVSTFSGQSESVRDVQFSMKDYFTFAASFENGNVQLWDIRRPDRYERMFTAHTGPVFCCDWHPEDRGWLATGGRDKMVKVWDMSTNRVKEIYCVQTFASVARVKWRPERRYHLATCSMMVDHNIYVWD 276          
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: WDR17_HUMAN (WD repeat-containing protein 17 OS=Homo sapiens GN=WDR17 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 1.033e-17
Identity = 59/208 (28.37%), Postives = 90/208 (43.27%), Query Frame = 2
Query:  206 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTV----DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLW 817
            +G++ +AWS      +    +DG   I           +   ++H   V   D++   +D   T   D  V+++ V    D+P  V  F  H   V++  W+P    + CS S D T+RIWD  +     I+  H   +    WN     L+ S S D +IK+WD R     +  +  HG  V  +   P R   +ASCS D TV LW
Sbjct:  481 NGIFCIAWSHKDSKRIATCSSDGFCIIRTID-----GKVLHKYKHPAAVFGCDWSQNNKDMIATGCEDTNVRVYYVATSSDQPLKV--FSGHTAKVFHVKWSPLREGILCSGSDDGTVRIWDYTQDACINILNGHTAPVRGLMWNTEIPYLLISGSWDYTIKVWDTRE-GTCVDTVYDHGADVYGLTCHPSRPFTMASCSRDSTVRLW 680          

HSP 2 Score: 78.9518 bits (193), Expect = 4.063e-14
Identity = 56/225 (24.89%), Postives = 104/225 (46.22%), Query Frame = 2
Query:  212 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHA----YCVYNATWNPRHSD--VFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYR-VPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHT 865
            ++D  +     +LL  A  DG++K++D     T   + +   +   ++S  + P   +     +  +   +W V +   ++ F EH     +C+    W+ + S     CS+ G C +R  D    G  +    H   +  CDW++ +  +IA+   D +++++ V      P+ V +GH   V  VK+SP R  +L S S D TV +WD+  +DA +   + HT
Sbjct:  396 IFDCKFKPDDPNLLATASFDGTIKVWDIN---TLTAVYTSPGNEGVIYSLSWAPGGLNCIAGGTSRNGAFIWNVQKGKIIQRFNEHGTNGIFCI---AWSHKDSKRIATCSSDGFCIIRTID----GKVLHKYKHPAAVFGCDWSQNNKDMIATGCEDTNVRVYYVATSSDQPLKVFSGHTAKVFHVKWSPLREGILCSGSDDGTVRIWDY-TQDACINILNGHT 609          
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: HAT2_USTMA (Histone acetyltransferase type B subunit 2 OS=Ustilago maydis GN=HAT2 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.033e-17
Identity = 51/168 (30.36%), Postives = 83/168 (49.40%), Query Frame = 2
Query:  344 REVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVR-------TFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGST--MIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 820
            +E +   ++P ++   + +S D TV  W ++  T          T+  H   V +  W+  H  +F S   D  L IWD+RE  S     + AH  E+ A  ++  ++ ++ + S DKS+ +WD+RN +V +  L  H   +  V +SPH   +LAS S D  V LWD
Sbjct:  242 KEGYGLSWSPLKQGHILAASEDTTVCHWDINNYTKPNNTLQPSATYTGHTAIVEDVAWHNHHESLFGSVGDDRQLLIWDIREPASAPKYRVEAHTGEVNALAFSPENENILVTGSSDKSVGVWDLRNLKVKLHSLESHTDEILSVCWSPHHATVLASASADRRVNLWD 409          

HSP 2 Score: 70.4774 bits (171), Expect = 1.445e-11
Identity = 53/221 (23.98%), Postives = 96/221 (43.44%), Query Frame = 2
Query:  215 YDLAWSESHDSLLIAAVADGSVKIYD----TALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYC--VYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWD---VRNYRVP----------IAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLW 817
            Y L+WS      ++AA  D +V  +D    T    T  P  +   HT  V    ++      F +   D  + +W +  P S   ++  A+   V    ++P + ++  + S D ++ +WD+R +   +  + +H  EIL+  W+ +   ++ASAS D+ + +WD   +   + P          I V  GH      + +SPH    L S + D  V +W
Sbjct:  245 YGLSWSPLKQGHILAASEDTTVCHWDINNYTKPNNTLQPSATYTGHTAIVEDVAWHNHHESLFGSVGDDRQLLIWDIREPASAPKYRVEAHTGEVNALAFSPENENILVTGSSDKSVGVWDLRNLKVKLHSLESHTDEILSVCWSPHHATVLASASADRRVNLWDLSKIGQEQTPDDAEDGPPELIFVHGGHTSRPTDLAWSPHMEWALTSAAEDNIVMVW 465          

HSP 3 Score: 70.0922 bits (170), Expect = 1.887e-11
Identity = 41/173 (23.70%), Postives = 78/173 (45.09%), Query Frame = 2
Query:  212 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS--------------TMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIW 685
            V D+AW   H+SL  +   D  + I+D   P +A   R +  HT EV++  ++P   +  +T S D +V +W + +    + + + H   + +  W+P H+ V  SAS D  + +WD+ ++G                 +   H        W+ + +  + SA+ D  + +W
Sbjct:  294 VEDVAWHNHHESLFGSVGDDRQLLIWDIREPASAPKYR-VEAHTGEVNALAFSPENENILVTGSSDKSVGVWDLRNLKVKLHSLESHTDEILSVCWSPHHATVLASASADRRVNLWDLSKIGQEQTPDDAEDGPPELIFVHGGHTSRPTDLAWSPHMEWALTSAAEDNIVMVW 465          
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: WDR24_MOUSE (WD repeat-containing protein 24 OS=Mus musculus GN=Wdr24 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.762e-17
Identity = 55/220 (25.00%), Postives = 99/220 (45.00%), Query Frame = 2
Query:  218 DLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMG-STMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCS--YDMTVCLWDFMVEDALVGRYDHHTE 868
            D+ W +  ++LL  A  +G V  ++   P      +   EH R V+   ++PT     ++ S D  +K + + R  SV TF   +  V +  ++ R    F S   +  +++WD+R       +  AH   +  CDW+  D   +A+   DK +K+WD+  +R           +V +VK+ P  R+ LA+CS   D  + +WD          ++ H +
Sbjct:   79 DVVWHQMDENLLATAATNGVVVTWNLGRPSRNKQDQLFTEHKRTVNKVCFHPTEAHVLLSGSQDGFMKCFDLRRKDSVSTFSGQSESVRDVQFSIRDYFTFASTFENGNVQLWDIRRPDRCERMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVKVWDMTTHRAKEIHCVQTIASVARVKWRPECRHHLATCSMMVDHNIYVWDVRRPFVPAAMFEEHRD 298          
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: RBBP7_CHICK (Histone-binding protein RBBP7 OS=Gallus gallus GN=RBBP7 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.762e-17
Identity = 49/179 (27.37%), Postives = 85/179 (47.49%), Query Frame = 2
Query:  314 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPT-------SVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 820
            NP   L  H +E +   +N   +   +++S D TV LW +           +   F  H+  V +  W+  H  +F S + D  L IWD R   ++     + AH  E+    +N Y + ++A+ S DK++ +WD+RN ++ +     H   + +V +SPH   +LAS   D  + +WD
Sbjct:  166 NPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 344          

HSP 2 Score: 82.0333 bits (201), Expect = 4.799e-15
Identity = 48/175 (27.43%), Postives = 78/175 (44.57%), Query Frame = 2
Query:  212 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS--------------TMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 691
            V D+AW   H+SL  +   D  + I+DT    T+ P  S+  HT EV+   +NP       T S D TV LW + +    + +F+ H   ++   W+P +  +  S+  D  L +WD+ ++G                 I   H  +I    WN  +  +I S S D  ++IW +
Sbjct:  228 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402          
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: WDR24_DICDI (WD repeat-containing protein 24 homolog OS=Dictyostelium discoideum GN=wdr24 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.302e-17
Identity = 54/203 (26.60%), Postives = 108/203 (53.20%), Query Frame = 2
Query:  233 ESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTV--DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMG-STMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHG--YAVRKVKFSPHRRNLLASCS--YDMTVCLWD 820
            E++  L+  A  +G+V I++T    + +  R   +H+R V+   ++P + D  +T S D+T+++W +      S  TF   +  + +  +NP  ++ F +A  + T+++WD+R+   +   I +H+  +L  DW+  +  +IAS   D++I++WD  N +     LN      +V ++K+ P  +  +ASCS   D  + +WD
Sbjct:   80 ENYRFLIATAATNGAVVIWNTVREGSKSVERVFTDHSRAVNKLAWHPEKLDCILTGSQDNTLRMWDIRDSANASKITFSPKSESIRDVQFNPSQANQFAAAFDNGTIQLWDIRKPTIAVEKITSHQGLVLTIDWHPEEKNIIASGGRDRAIRVWDFSNGK----SLNNVSTISSVSRIKWRPGNKWHIASCSSIVDFQIHIWD 278          

HSP 2 Score: 72.0182 bits (175), Expect = 4.966e-12
Identity = 60/249 (24.10%), Postives = 103/249 (41.37%), Query Frame = 2
Query:   89 RLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPT-SVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASAS--VDKSIKIWDVRNYRVPIAVLNGH-GYAVRKVKFSPHRRNLLASCSYDMTVCLWDF 823
            R  +ATA       NG V + +         E V  D +  V  LAW       ++    D +++++D      A+ I +    +  +    +NP++ + F  +  + T++LW + +PT +V     H   V    W+P   ++  S   D  +R+WD    G ++   +    +    W   +   IAS S  VD  I IWDV+   +P+     H       +  SP   + L SCS D  + L +F
Sbjct:   83 RFLIATAAT-----NGAVVIWNTVREGSKSVERVFTDHSRAVNKLAWHPEKLDCILTGSQDNTLRMWDIRDSANASKI-TFSPKSESIRDVQFNPSQANQFAAAFDNGTIQLWDIRKPTIAVEKITSHQGLVLTIDWHPEEKNIIASGGRDRAIRVWDFSN-GKSLNNVSTISSVSRIKWRPGNKWHIASCSSIVDFQIHIWDVKKPYIPLFSFTDHRDVPTGLIWKSP---SSLISCSKDSHLLLNEF 321          
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: RBA1_CAEEL (Probable histone-binding protein rba-1 OS=Caenorhabditis elegans GN=rba-1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.006e-17
Identity = 55/208 (26.44%), Postives = 96/208 (46.15%), Query Frame = 2
Query:  239 HDSLLIAAVADGS-VKIYDTALPPTA------NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVR-------TFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 820
            H+  +IA+      V I+D    P+        P   L  H  E +   ++ TR    +T+  D  +  W ++   ++         FK H+    + +++  H+ VF S   D  L +WD+R+    +    H  E+    +N + + ++A+ SVDK++ +WD+RN R  +  L  H   + +V FSPH   +LAS   D  V +WD
Sbjct:  130 HNPFIIASRGPSDDVYIFDYTKHPSEPKDTKFRPQLRLKGHEGEGYGMSWSNTREGHLLTAGDDGMICHWDINANQTISGQIVPQSKFKGHSSNAEDVSFHALHNFVFGSVGDDRKLNLWDLRQSKPQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVALWDMRNMRKKMYTLKHHNDEIFQVSFSPHYETVLASSGSDDRVIVWD 337          
The following BLAST results are available for this feature:
BLAST of FC878391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
RBBP7_HUMAN6.057e-1827.37Histone-binding protein RBBP7 OS=Homo sapiens GN=R... [more]
RBBP7_BOVIN6.057e-1827.37Histone-binding protein RBBP7 OS=Bos taurus GN=RBB... [more]
HAT2_GIBZE7.911e-1829.17Histone acetyltransferase type B subunit 2 OS=Gibb... [more]
WDR24_DANRE1.033e-1725.98WD repeat-containing protein 24 OS=Danio rerio GN=... [more]
WDR17_HUMAN1.033e-1728.37WD repeat-containing protein 17 OS=Homo sapiens GN... [more]
HAT2_USTMA1.033e-1730.36Histone acetyltransferase type B subunit 2 OS=Usti... [more]
WDR24_MOUSE1.762e-1725.00WD repeat-containing protein 24 OS=Mus musculus GN... [more]
RBBP7_CHICK1.762e-1727.37Histone-binding protein RBBP7 OS=Gallus gallus GN=... [more]
WDR24_DICDI2.302e-1726.60WD repeat-containing protein 24 homolog OS=Dictyos... [more]
RBA1_CAEEL3.006e-1726.44Probable histone-binding protein rba-1 OS=Caenorha... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA60DB01RM1 IVIA1 Citrus clementina cDNA clone IC0AAA60DB01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878391 ID=FC878391; Name=FC878391; organism=Citrus clementina; type=EST; length=877bp
CCACCGGCGAATAACAACACCAAAGATGCCCGTCTTCAAAACCCCATTTA
ACGGCTACTCCGTCAAATTCTCTCCCTTCTACGAGTCCCGTCTCGCCGTT
GCCACCGCCCAAAACTTCGGAATCCTCGGTAATGGCCGCGTCCACGTCCT
CGACCTCTCCCCCGCCGCTCCCGCTCTCACCGAACTAGTCGCCTTCGACA
CTGCCGACGGTGTTTACGACCTCGCATGGTCCGAATCCCACGACTCCCTC
CTAATCGCCGCCGTCGCCGATGGATCCGTTAAAATCTACGACACGGCCCT
CCCGCCAACGGCCAATCCCATCCGCTCCCTCCACGAGCACACTCGCGAAG
TCCACTCGGCCGATTATAACCCCACTCGACGTGATTCTTTCATCACATCG
TCCTGGGATGACACGGTTAAACTCTGGACCGTTGACCGGCCTACCAGTGT
GCGAACATTTAAAGAACACGCGTATTGCGTGTACAACGCCACGTGGAACC
CGCGTCACAGCGACGTGTTCTGTTCCGCGAGTGGGGACTGCACTCTTCGA
ATTTGGGATGTGAGAGAGATGGGCAGCACGATGATAATTCCGGCCCACGA
GTTTGAAATTTTAGCTTGTGATTGGAACAAGTACGATGACTGTTTAATTG
CGAGTGCTTCAGTTGATAAGAGTATTAAAATTTGGGATGTGAGGAACTAT
AGAGTTCCAATTGCTGTATTAAATGGACATGGCTATGCCGTGAGGAAAGT
GAAATTTTCACCGCACAGGAGGAATTTGTTAGCGTCTTGTTCGTATGACA
TGACTGTGTGCTTATGGGATTTCATGGTGGAGGATGCTTTGGTTGGGAGG
TATGATCATCACACTGAGTTTGCCGTT
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