FC878391

Overview
NameFC878391
Unique NameFC878391
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length877
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4226 contig Ccv1_Contig4226:174..1050. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: Y2124_ANASP (Uncharacterized WD repeat-containing protein all2124 OS=Anabaena sp. (strain PCC 7120) GN=all2124 PE=4 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.926e-17
Identity = 61/202 (30.20%), Postives = 106/202 (52.48%), Query Frame = 2
Query:  212 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLW 817
            +Y ++++   D L+ +A AD +VKI+          +++L  H  EV+  +++P  + +  ++S D+TVKLW V      +T K H   V+  +++P    +  SAS D T+R+WD         +PAH   + + ++N  D  ++AS S DK++K+W   +  + +   +GH   V    FSP  R  +AS S D TV +W
Sbjct: 1407 IYGISFTPQGD-LIASANADKTVKIWRVR---DGKALKTLIGHDNEVNKVNFSPDGK-TLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSP-DGKIIASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFNP-DGSMLASTSADKTVKLWRSHDGHL-LHTFSGHSNVVYSSSFSPDGR-YIASASEDKTVKIW 1599          

HSP 2 Score: 77.7962 bits (190), Expect = 9.051e-14
Identity = 55/204 (26.96%), Postives = 101/204 (49.51%), Query Frame = 2
Query:  206 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLW 817
            DGV  ++ S    ++   ++ D ++K++           R+L+ H   V+S  ++P  + +  +   D T+KLW     T ++T   H   V N  ++P   ++  SAS D ++++WD       M +  H   ++   ++  D   IA+ S DK++K+W  ++ ++ +  LNGH   V  + FSP  +  LAS S D T+ LW
Sbjct: 1073 DGVISISISRDGQTIASGSL-DKTIKLWSR----DGRLFRTLNGHEDAVYSVSFSPDGQ-TIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNL-ASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSP-DGQTIAAGSEDKTVKLWHRQDGKL-LKTLNGHQDWVNSLSFSPDGKT-LASASADKTIKLW 1266          
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: MSI3_ARATH (WD-40 repeat-containing protein MSI3 OS=Arabidopsis thaliana GN=MSI3 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 5.127e-17
Identity = 61/236 (25.85%), Postives = 111/236 (47.03%), Query Frame = 2
Query:  152 DLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGS-VKIYDTAL----PPTA--NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS------VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 820
            D  P  P + E+      DG  + A        L+ A   GS V ++D A     P T+  +P   L  H +E +   ++  +    ++ S D  + LW V    +      +  ++ H   + +  W+ ++ ++F SA  DC L IWD+R       +  HE EI    +N +++ ++A+AS D ++ ++D+R    P+ VL+ H   V +V++ P+   +LAS   D  + +WD
Sbjct:  100 DQEPIVPKV-EIKQKIRVDGEVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTSECDPDLRLMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWD 334          

HSP 2 Score: 68.5514 bits (166), Expect = 5.491e-11
Identity = 52/233 (22.32%), Postives = 100/233 (42.92%), Query Frame = 2
Query:   53 GYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAP--ALTELVAFDTADGVY-DLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS-VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI----------------IPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 691
            GY + +S F E  L   +          R+ + D+S  A    L  +  ++    +  D+AW   ++++  +A  D  + I+D       + ++    H RE++   +NP       T+S D TV L+ + + T+ +    +H   V+   W+P H  V  S+  D  L +WD+  +G   +                   H+ +I    WNK +  +I+S + D S+++W +
Sbjct:  172 GYGLAWSSFKEGYLLSGSQDQ-------RICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQVKV---HEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQM 394          
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: HAT2_ASHGO (Histone acetyltransferase type B subunit 2 OS=Ashbya gossypii GN=HAT2 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.746e-17
Identity = 59/199 (29.65%), Postives = 102/199 (51.26%), Query Frame = 2
Query:  242 DSLLIAAV-ADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVD---RPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR-EMGSTMIIP-AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 820
            +S +IA +   G++ I+D  L  +   + +L  H    +   +NP      ++ S D TV LW ++   +P S+ T   H   V +  W+   S+VF + S D TL++ D R  +     +P A  F  L+  ++K+   L+A+A VD  I ++D+R+   P+ V++GH  +V  V+FSPH   ++ S   D    +WD
Sbjct:  152 NSNIIATINGKGTISIFDRTLEESKAQVSTLAFHKENGYGLAFNPHISGELLSGSDDTTVALWDIEAAKKPKSILT--SHDDIVNDVKWHEFESNVFGTVSEDKTLQVHDKRVRLEPVKKLPTASPFNTLS--FSKHSRNLLAAAGVDSQIYLYDMRDMSSPLHVMSGHQDSVTTVEFSPHTDGIICSSGSDRRAIIWD 346          
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: RBBP7_XENLA (Histone-binding protein RBBP7 OS=Xenopus laevis GN=rbbp7 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.142e-16
Identity = 48/179 (26.82%), Postives = 84/179 (46.93%), Query Frame = 2
Query:  314 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPT-------SVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 820
            +P   L  H +E +   +N       +++S D TV LW +           +   F  H+  V +  W+  H  +F S + D  L IWD R   ++     + AH  E+    +N Y + ++A+ S DK++ +WD+RN ++ +     H   + +V +SPH   +LAS   D  + +WD
Sbjct:  167 SPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345          

HSP 2 Score: 82.0333 bits (201), Expect = 4.799e-15
Identity = 48/175 (27.43%), Postives = 78/175 (44.57%), Query Frame = 2
Query:  212 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS--------------TMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 691
            V D+AW   H+SL  +   D  + I+DT    T+ P  S+  HT EV+   +NP       T S D TV LW + +    + +F+ H   ++   W+P +  +  S+  D  L +WD+ ++G                 I   H  +I    WN  +  +I S S D  ++IW +
Sbjct:  229 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403          
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: RBBP7_XENTR (Histone-binding protein RBBP7 OS=Xenopus tropicalis GN=rbbp7 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.492e-16
Identity = 48/179 (26.82%), Postives = 84/179 (46.93%), Query Frame = 2
Query:  314 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPT-------SVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 820
            +P   L  H +E +   +N       +++S D TV LW +           +   F  H+  V +  W+  H  +F S + D  L IWD R   ++     + AH  E+    +N Y + ++A+ S DK++ +WD+RN ++ +     H   + +V +SPH   +LAS   D  + +WD
Sbjct:  167 SPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345          

HSP 2 Score: 82.0333 bits (201), Expect = 4.799e-15
Identity = 48/175 (27.43%), Postives = 78/175 (44.57%), Query Frame = 2
Query:  212 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS--------------TMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 691
            V D+AW   H+SL  +   D  + I+DT    T+ P  S+  HT EV+   +NP       T S D TV LW + +    + +F+ H   ++   W+P +  +  S+  D  L +WD+ ++G                 I   H  +I    WN  +  +I S S D  ++IW +
Sbjct:  229 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403          
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: PRW1_SCHPO (RbAp48-related WD40 repeat-containing protein prw1 OS=Schizosaccharomyces pombe GN=prw1 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.492e-16
Identity = 55/193 (28.50%), Postives = 91/193 (47.15%), Query Frame = 2
Query:  275 SVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVD---RPTSVRTFKEHAYC----VYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM----IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 820
            S + Y +A      P   L +HT+   S  +N   + + ++ S D T+  W ++      S    K H       V +  ++ +H D+  S S D  L + D+R   ++      + AH   I +  +N ++D ++A+ S DK+I +WD+RN    +  L GH   V K+ FSPH   +LAS S D    +WD
Sbjct:  162 SFESYSSASESPLKPKYRLTKHTQPCTSVCWNFLSKGTLVSGSQDATLSCWDLNAYNESDSASVLKVHISSHEKQVSDVRFHYKHQDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAFNPHNDFILATCSTDKTIALWDLRNLNQRLHTLEGHEDIVTKISFSPHEEPILASTSADRRTLVWD 354          
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: HAT2_NEUCR (Histone acetyltransferase type B subunit 2 OS=Neurospora crassa GN=hat-2 PE=3 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.492e-16
Identity = 66/207 (31.88%), Postives = 97/207 (46.86%), Query Frame = 2
Query:  251 LIAAVA-DGSVKIYDT---ALPPTANPIRSLH--EHTREVHSADYNPTRRDSFITSSWDDTVKLW-------TVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR--EMGSTMIIP--AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 820
            +IA +A DG V I+D    ++ P+  P   L    H  E    ++NP      +T S D TV LW       T  +    R +  H++ V +   +P       + S D TL+I DVR  E     I+    H   I A  +N   + +IA+AS DK+I IWD+RN +  +  L GH  AV  +++ P    +L S SYD  +  WD
Sbjct:  155 IIATLAVDGRVLIFDRTKHSITPSGTPSPQLELIGHKEEGFGLNWNPHEEGCLVTGSEDKTVLLWDLKTYEGTSKQLKYSRKYTHHSHIVNDVQHHPLVKSWIGTVSDDLTLQIIDVRRPETDKAAIVARNGHSDAINALAFNPRVETIIATASADKTIGIWDMRNMKSKVHTLEGHQDAVTSLEWHPTESAILGSGSYDRRLLFWD 361          
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: RBBP7_PONAB (Histone-binding protein RBBP7 OS=Pongo abelii GN=RBBP7 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.948e-16
Identity = 48/180 (26.67%), Postives = 86/180 (47.78%), Query Frame = 2
Query:  314 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPT-------SVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAV-RKVKFSPHRRNLLASCSYDMTVCLWD 820
            NP   L  H +E +   +N       +++S D TV LW ++          +   F  H+  V +  W+  H  +F S + D  L +WD R   ++    ++ AH  E+    +N Y + ++A+ S DK++ +WD+RN ++ +     H   + + V +SPH   +LAS   D  + +WD
Sbjct:  167 NPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAVFTGHSAVVEDVAWHLLHESLFGSVADDQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVVHWSPHNETILASSGTDRRLNVWD 346          

HSP 2 Score: 76.2554 bits (186), Expect = 2.633e-13
Identity = 47/176 (26.70%), Postives = 77/176 (43.75%), Query Frame = 2
Query:  212 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNAT-WNPRHSDVFCSASGDCTLRIWDVREMGS--------------TMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 691
            V D+AW   H+SL  +   D  + ++DT    T+ P   +  HT EV+   +NP       T S D TV LW + +    + TF+ H   ++    W+P +  +  S+  D  L +WD+ ++G                 I   H  +I    WN  +  +I S S D  ++IW +
Sbjct:  229 VEDVAWHLLHESLFGSVADDQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 404          
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: WDR24_XENLA (WD repeat-containing protein 24 OS=Xenopus laevis GN=wdr24 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.324e-16
Identity = 51/204 (25.00%), Postives = 93/204 (45.59%), Query Frame = 2
Query:  218 DLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMG-STMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCS--YDMTVCLWD 820
            D+ W +  D+LL  A  +G V  ++   P      +   EH R V+   ++PT     ++ S D  +K + + +  SV TF   +  V +  ++ R    F +   +  +++WD+R       +  AH   +  CDW+  D   +A+   DK +K+WD+   R           +V +VK+ P R+  + +CS   D  + +WD
Sbjct:   74 DVVWHQMDDNLLATAATNGVVVTWNLGKPSRNKQDQLFTEHKRTVNKVCFHPTEVYMLLSGSQDGYMKCFDLRKKDSVSTFSGQSESVRDVQFSIRDYFTFAATFENGNVQLWDIRRPDRCERMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVKVWDMNTNRAKEIYCVQTIASVARVKWRPERKYHIGTCSMMVDHNIYVWD 277          
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: TG125_CAEBR (WD repeat-containing protein tag-125 OS=Caenorhabditis briggsae GN=tag-125 PE=4 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.341e-16
Identity = 61/186 (32.80%), Postives = 99/186 (53.23%), Query Frame = 2
Query:  266 ADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF 823
            AD +VKI++ +     +  R+L  H   V+   ++   + S +T+S D T+K++ V      +T K H   V+   +NP+ S +  S S D ++RIWDVR       +PAH   + A  +N+ D  LI S S D  ++IWD  N +    +++     V  VKFSP+ + +L+S + D T+ LWDF
Sbjct:   99 ADKTVKIWNMS---DLSCERTLTGHKLGVNDFAWSADSK-SIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQ-SSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNR-DGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSS-NLDNTLKLWDF 277          

HSP 2 Score: 77.7962 bits (190), Expect = 9.051e-14
Identity = 65/236 (27.54%), Postives = 110/236 (46.61%), Query Frame = 2
Query:  161 PAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANP---------------IRSLHEHTREVHSADYNPTRRDSFI-TSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 820
            PAAPA+ E    + ++       +E+     +++V+  +  I  TA+P    P               I ++  HT+ + +  ++P  +  F+ TSS D TVK+W +   +  RT   H   V +  W+   S    +AS D TL+I++V  +     +  H   +  C++N     L+ S S D+S++IWDVR   + +  L  H   V  V F+    +L+ S SYD  V +WD
Sbjct:   13 PAAPAVEEAQGVNNSE-------AEAPAPAALSSVSPANPPI--TAVPEATAPTTSQESTIPGAGYKLISTIEGHTKSISAVKFSPCGK--FLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWS-ADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNP-QSSLVVSGSFDESVRIWDVRT-GMCVKTLPAHSDPVSAVSFN-RDGSLITSGSYDGLVRIWD 233          
The following BLAST results are available for this feature:
BLAST of FC878391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
Y2124_ANASP3.926e-1730.20Uncharacterized WD repeat-containing protein all21... [more]
MSI3_ARATH5.127e-1725.85WD-40 repeat-containing protein MSI3 OS=Arabidopsi... [more]
HAT2_ASHGO8.746e-1729.65Histone acetyltransferase type B subunit 2 OS=Ashb... [more]
RBBP7_XENLA1.142e-1626.82Histone-binding protein RBBP7 OS=Xenopus laevis GN... [more]
RBBP7_XENTR1.492e-1626.82Histone-binding protein RBBP7 OS=Xenopus tropicali... [more]
PRW1_SCHPO1.492e-1628.50RbAp48-related WD40 repeat-containing protein prw1... [more]
HAT2_NEUCR1.492e-1631.88Histone acetyltransferase type B subunit 2 OS=Neur... [more]
RBBP7_PONAB1.948e-1626.67Histone-binding protein RBBP7 OS=Pongo abelii GN=R... [more]
WDR24_XENLA3.324e-1625.00WD repeat-containing protein 24 OS=Xenopus laevis ... [more]
TG125_CAEBR4.341e-1632.80WD repeat-containing protein tag-125 OS=Caenorhabd... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA60DB01RM1 IVIA1 Citrus clementina cDNA clone IC0AAA60DB01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878391 ID=FC878391; Name=FC878391; organism=Citrus clementina; type=EST; length=877bp
CCACCGGCGAATAACAACACCAAAGATGCCCGTCTTCAAAACCCCATTTA
ACGGCTACTCCGTCAAATTCTCTCCCTTCTACGAGTCCCGTCTCGCCGTT
GCCACCGCCCAAAACTTCGGAATCCTCGGTAATGGCCGCGTCCACGTCCT
CGACCTCTCCCCCGCCGCTCCCGCTCTCACCGAACTAGTCGCCTTCGACA
CTGCCGACGGTGTTTACGACCTCGCATGGTCCGAATCCCACGACTCCCTC
CTAATCGCCGCCGTCGCCGATGGATCCGTTAAAATCTACGACACGGCCCT
CCCGCCAACGGCCAATCCCATCCGCTCCCTCCACGAGCACACTCGCGAAG
TCCACTCGGCCGATTATAACCCCACTCGACGTGATTCTTTCATCACATCG
TCCTGGGATGACACGGTTAAACTCTGGACCGTTGACCGGCCTACCAGTGT
GCGAACATTTAAAGAACACGCGTATTGCGTGTACAACGCCACGTGGAACC
CGCGTCACAGCGACGTGTTCTGTTCCGCGAGTGGGGACTGCACTCTTCGA
ATTTGGGATGTGAGAGAGATGGGCAGCACGATGATAATTCCGGCCCACGA
GTTTGAAATTTTAGCTTGTGATTGGAACAAGTACGATGACTGTTTAATTG
CGAGTGCTTCAGTTGATAAGAGTATTAAAATTTGGGATGTGAGGAACTAT
AGAGTTCCAATTGCTGTATTAAATGGACATGGCTATGCCGTGAGGAAAGT
GAAATTTTCACCGCACAGGAGGAATTTGTTAGCGTCTTGTTCGTATGACA
TGACTGTGTGCTTATGGGATTTCATGGTGGAGGATGCTTTGGTTGGGAGG
TATGATCATCACACTGAGTTTGCCGTT
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