FC878391

Overview
NameFC878391
Unique NameFC878391
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length877
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4226 contig Ccv1_Contig4226:174..1050. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: MSI1_SOLLC (WD-40 repeat-containing protein MSI1 OS=Solanum lycopersicum GN=MSI1 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.341e-16
Identity = 56/243 (23.05%), Postives = 107/243 (44.03%), Query Frame = 2
Query:  179 TELVAFDTADGVYDLAWSESHDS-------------LLIAAVADGSVKIYDTALPPT-------ANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPT------SVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIP---AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 820
            +E   F  A+G   +    +HD              ++        V ++D +  P+        NP   L  H+ E +   ++  ++   ++ S D  + LW ++         +++ FK H   V +  W+ RH  +F S   D  L +WD+R    T  I    AH+ E+    +N +++ ++A+ S DK++K++D+R     +  L+ H   V +V ++P    +LASC     + +WD
Sbjct:  104 SEFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLRGHSTEGYGLSWSQFKQGHLLSGSDDSHICLWDINATPKNKALEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLHVWDLRTPSVTKPIQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKISTALHTLDCHKEEVFQVGWNPKNETILASCCLGRRLMVWD 346          

HSP 2 Score: 79.7221 bits (195), Expect = 2.382e-14
Identity = 57/229 (24.89%), Postives = 98/229 (42.79%), Query Frame = 2
Query:   53 GYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVY-DLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR-PTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 691
            GY + +S F +  L   +  +   L +     ++ +P   AL  +  F   +GV  D+AW   H+ L  +   D  + ++D   P    PI+S+  H  EV+   +NP       T S D TVKL+ + +  T++ T   H   V+   WNP++  +  S      L +WD+  +                  I   H  +I    WN  +D ++AS + D  ++IW +
Sbjct:  181 GYGLSWSQFKQGHLLSGSDDSHICLWD-----INATPKNKALEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLHVWDLRTPSVTKPIQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKISTALHTLDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQM 404          
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: WD51B_MOUSE (WD repeat-containing protein 51B OS=Mus musculus GN=Wdr51b PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.669e-16
Identity = 55/166 (33.13%), Postives = 87/166 (52.41%), Query Frame = 2
Query:  323 RSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 820
            RS   H   + SAD++P  +    T+SWD  + LW++        +  H   V +  ++P+  ++  SAS D T+R+W +   G +    AH   + + D++  D  L+ +AS DKSIK+W +   R  +  L  H + VR  KFSP  R L+ SCS D T+ +WD
Sbjct:   12 RSFKGHKAAITSADFSPNCKQ-IATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQ-GNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSA-DGQLLVTASEDKSIKVWSMFRQRF-LYSLYRHTHWVRCAKFSPDGR-LIVSCSEDKTIKIWD 172          
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: WDR69_XENTR (WD repeat-containing protein 69 OS=Xenopus tropicalis GN=wdr69 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.263e-15
Identity = 54/201 (26.87%), Postives = 102/201 (50.75%), Query Frame = 2
Query:  218 DLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 820
            ++A+++S  S +  +  D + K++DTA   +   + +L  H   V++  +N    D   T S+D T KLW+ +      TF+ H   +    +NP+ S +  + S D T ++WD++     + +  H  EI++  +N   D LI + S D ++ +W++ + R  I  L GH   +   +F+    +L+A+ S D +  LWD
Sbjct:   97 NVAFNKSGSSFITGSY-DRTCKVWDTA---SGEELHTLEGHRNVVYAIQFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLAFNPQ-STLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDRLI-TGSFDHTVSVWEIPSGR-RIHTLIGHRGEISSAQFN-WDCSLIATASMDKSCKLWD 289          
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: WDR69_XENLA (WD repeat-containing protein 69 OS=Xenopus laevis GN=wdr69 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.263e-15
Identity = 54/201 (26.87%), Postives = 102/201 (50.75%), Query Frame = 2
Query:  218 DLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 820
            ++A+++S  S +  +  D + K++DTA   +   + +L  H   V++  +N    D   T S+D T KLW+ +      TF+ H   +    +NP+ S +  + S D T ++WD++     + +  H  EI++  +N   D LI + S D ++ +W++ + R  I  L GH   +   +F+    +L+A+ S D +  LWD
Sbjct:   97 NVAFNKSGSSFITGSY-DRTCKVWDTA---SGEELHTLEGHRNVVYAIQFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLVFNPQ-STLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDRLI-TGSFDHTVSVWEIPSGR-RIHTLIGHRGEISSAQFN-WDCSLIATASMDKSCKLWD 289          
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: WDR5_DICDI (WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum GN=wdr5 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.263e-15
Identity = 64/208 (30.77%), Postives = 102/208 (49.04%), Query Frame = 2
Query:  251 LIAAVADGSVKI---YDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDD-TVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHH 862
            L +A AD ++KI   YD          R+L  H   +  +D   ++    I S+ DD T+K+W V+    V+T K H   V+  ++NP+ S++  S S D  +RIWDV     T +I AH   +    +N+ D  L+ S S D +++IWD    ++   +    G  V  VKFSP+ + +LA  + D T+ LW +      +  Y  H
Sbjct:   61 LASASADKTIKIWGAYDGKFE------RTLEGHKEGI--SDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQ-SNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNR-DGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAG-TLDNTLRLWSYNNNKKCLKTYTGH 257          
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: MSI1_ARATH (WD-40 repeat-containing protein MSI1 OS=Arabidopsis thaliana GN=MSI1 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.263e-15
Identity = 48/207 (23.19%), Postives = 96/207 (46.38%), Query Frame = 2
Query:  248 LLIAAVADGSVKIYDTALPPT-------ANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRT------FKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGST---MIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 820
            ++     +  V ++D +  P+        NP   L  H+ E +   ++  ++   ++ S D  + LW ++     ++      FK H   V +  W+ RH  +F S   D  L IWD+R   ++     + AH  E+    +N +++ ++A+ S DK++K++D+R     +   + H   V +V ++P    +LASC     + +WD
Sbjct:  140 IIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWD 346          

HSP 2 Score: 79.337 bits (194), Expect = 3.111e-14
Identity = 56/229 (24.45%), Postives = 99/229 (43.23%), Query Frame = 2
Query:   53 GYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVY-DLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR-PTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIP--------------AHEFEILACDWNKYDDCLIASASVDKSIKIWDV 691
            GY + +S F +  L   +      L +     ++ +P   +L     F   +GV  D+AW   H+ L  +   D  + I+D   P  + P++S+  H+ EV+   +NP       T S D TVKL+ + +  T++ TF  H   V+   WNP++  +  S      L +WD+  +     +                H  +I    WN  +D +I+S + D  ++IW +
Sbjct:  181 GYGLSWSKFKQGHLLSGSDDAQICLWD-----INATPKNKSLDAQQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQM 404          
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: TG125_CAEEL (WD repeat-containing protein tag-125 OS=Caenorhabditis elegans GN=tag-125 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.649e-15
Identity = 58/167 (34.73%), Postives = 86/167 (51.50%), Query Frame = 2
Query:  326 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFC--SASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 820
            +L  HT+ + SA ++P  +    TSS D TVK+W +D     RT   H   V +  W+   SD  C  SAS D TL+I+++     T  +  H   +  C++N     L+ S S D+S++IWDV+   + I  L  H   V  V F+    +L+AS SYD  V +WD
Sbjct:   82 TLEGHTKSISSAKFSPCGK-YLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWS---SDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNP-QSSLVVSGSFDESVRIWDVKT-GMCIKTLPAHSDPVSAVSFN-RDGSLIASGSYDGLVRIWD 241          

HSP 2 Score: 80.8777 bits (198), Expect = 1.069e-14
Identity = 55/167 (32.93%), Postives = 89/167 (53.29%), Query Frame = 2
Query:  323 RSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF 823
            R+L  H   V+   ++   R   +++S D T+K++ +      +T K H   V+   +NP+ S +  S S D ++RIWDV+       +PAH   + A  +N+ D  LIAS S D  ++IWD  N +    +++     V  VKFSP+ + +LAS + D T+ LWDF
Sbjct:  123 RTLTGHKLGVNDIAWSSDSR-CVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQ-SSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNR-DGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILAS-NLDSTLKLWDF 285          
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: YQ95_SCHPO (Uncharacterized WD repeat-containing protein C18.05c OS=Schizosaccharomyces pombe GN=SPCC18.05c PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.154e-15
Identity = 46/145 (31.72%), Postives = 76/145 (52.41%), Query Frame = 2
Query:  251 LIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIW 685
            L++A  D  + ++D     +  PI  +H H + V+ A ++P  R    T+S+D +V+LW       + T + H   VY   W+   S +  S+S D TL++WDVR       +P HE ++ A DW+  D   +AS   DK+++IW
Sbjct:  361 LVSASDDLQLILWDPQ--KSTKPITKMHGHQKVVNHASFSPDGR-CIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWST-DSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSP-DGQRVASGGADKAVRIW 500          

HSP 2 Score: 79.337 bits (194), Expect = 3.111e-14
Identity = 52/173 (30.06%), Postives = 85/173 (49.13%), Query Frame = 2
Query:  326 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM--IIPAHEFEILACDWNKY------DDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 820
            S++ H   + SA ++P+     +T S D T +LW  D  T + T K H   V    W P  + +  + S D T+R WD ++ GS +   +  H   I+A  W            L+AS S D +++IW+V+  R  +  L+GH   +  V++    +N + S SYD T+ +WD
Sbjct:  129 SMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAP-DASIIATGSMDNTIRFWDPKK-GSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVK-LRTLLFTLSGHTAPITCVRWG--GQNWIYSSSYDKTIRIWD 296          
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: MSI2_ARATH (WD-40 repeat-containing protein MSI2 OS=Arabidopsis thaliana GN=MSI2 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.154e-15
Identity = 43/175 (24.57%), Postives = 88/175 (50.29%), Query Frame = 2
Query:  314 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRP------TSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 820
            +P   L  H +E +   ++P +    ++ S D  + LW V          ++  ++ H   + + +W+ ++ ++F SA  D  L IWD R       +  HE E+    +N +++ ++A+AS D ++ ++D+R    P+ V++ H   V +V++ P+   +LAS   D  + +WD
Sbjct:  159 DPDLRLVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWD 333          

HSP 2 Score: 76.6406 bits (187), Expect = 2.016e-13
Identity = 55/233 (23.61%), Postives = 102/233 (43.78%), Query Frame = 2
Query:   53 GYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLS--PAAPALTELVAFDTADG-VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS-VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI----------------IPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 691
            GY + +SPF E  L   +          ++ + D+S  P    L  +  ++  +  + D++W   +++L  +A  DG + I+DT      + ++    H REV+   +NP       T+S D TV L+ + +  + +     H   V+   W+P H  V  S+  D  L +WD+  +G   +                   H+ +I    WNK +  +IAS + D S+++W +
Sbjct:  171 GYGLSWSPFKEGYLLSGSQDQ-------KICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKV---HEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQM 393          
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: HETE1_PODAN (Vegetative incompatibility protein HET-E-1 OS=Podospora anserina GN=HET-E1 PE=4 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.154e-15
Identity = 60/184 (32.61%), Postives = 92/184 (50.00%), Query Frame = 2
Query:  269 DGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 820
            D ++KI+DTA   +    ++L  H   V S  ++P R +   + S D T+K+W     T  +T + H   V +  ++P    V  S S D T++IWD      T  +  H   +L+  ++  D   +AS S DK+IKIWD  +       L GHG +V  V FSP  +  +AS S D T+ +WD
Sbjct:  862 DKTIKIWDTA---SGTGTQTLEGHGGSVWSVAFSPDR-ERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRV-ASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSP-DGQRVASGSGDKTIKIWDTAS-GTCTQTLEGHGGSVWSVAFSPDGQR-VASGSDDKTIKIWD 1037          

HSP 2 Score: 73.559 bits (179), Expect = 1.707e-12
Identity = 56/184 (30.43%), Postives = 89/184 (48.37%), Query Frame = 2
Query:  269 DGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 820
            D ++KI+D     +    ++L  H   V S  ++P  +    + S D T+K+W     T  +T + H   V++  ++P    V  S S D T++IWD      T  +  H   + +  ++  D   +AS S DK+IKIWD  +       L GHG  V+ V FSP  +  +AS S D T+ +WD
Sbjct: 1072 DHTIKIWDAV---SGTCTQTLEGHGDSVWSVAFSPDGQ-RVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRV-ASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSP-DGQRVASGSSDKTIKIWDTAS-GTCTQTLEGHGGWVQSVAFSPDGQR-VASGSSDNTIKIWD 1247          

HSP 3 Score: 73.1738 bits (178), Expect = 2.229e-12
Identity = 56/184 (30.43%), Postives = 89/184 (48.37%), Query Frame = 2
Query:  269 DGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 820
            D ++KI+D A   +    ++L  H   V S  ++P  +    + S D T+K+W     T  +T + H   V++  ++P    V  S S D T++IWD      T  +  H   + +  ++  D   +AS S D +IKIWD  +       L GHG +V  V FSP  +  +AS S D T+ +WD
Sbjct:  946 DHTIKIWDAA---SGTCTQTLEGHGSSVLSVAFSPDGQ-RVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRV-ASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSP-DGQRVASGSDDHTIKIWDAVS-GTCTQTLEGHGDSVWSVAFSPDGQR-VASGSIDGTIKIWD 1121          

HSP 4 Score: 69.707 bits (169), Expect = 2.465e-11
Identity = 46/142 (32.39%), Postives = 70/142 (49.30%), Query Frame = 2
Query:  395 TSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 820
            + S D T+K+W     T  +T + H   V++  ++P    V  S S D T++IWD      T  +  H   + +  ++  D   +AS S D +IKIWD  +       L GHG +V  V FSP  +  +AS S D T+ +WD
Sbjct:  858 SGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRERV-ASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSP-DGQRVASGSDDHTIKIWDAAS-GTCTQTLEGHGSSVLSVAFSPDGQR-VASGSGDKTIKIWD 995          
The following BLAST results are available for this feature:
BLAST of FC878391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
MSI1_SOLLC4.341e-1623.05WD-40 repeat-containing protein MSI1 OS=Solanum ly... [more]
WD51B_MOUSE5.669e-1633.13WD repeat-containing protein 51B OS=Mus musculus G... [more]
WDR69_XENTR1.263e-1526.87WD repeat-containing protein 69 OS=Xenopus tropica... [more]
WDR69_XENLA1.263e-1526.87WD repeat-containing protein 69 OS=Xenopus laevis ... [more]
WDR5_DICDI1.263e-1530.77WD repeat-containing protein 5 homolog OS=Dictyost... [more]
MSI1_ARATH1.263e-1523.19WD-40 repeat-containing protein MSI1 OS=Arabidopsi... [more]
TG125_CAEEL1.649e-1534.73WD repeat-containing protein tag-125 OS=Caenorhabd... [more]
YQ95_SCHPO2.154e-1531.72Uncharacterized WD repeat-containing protein C18.0... [more]
MSI2_ARATH2.154e-1524.57WD-40 repeat-containing protein MSI2 OS=Arabidopsi... [more]
HETE1_PODAN2.154e-1532.61Vegetative incompatibility protein HET-E-1 OS=Podo... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA60DB01RM1 IVIA1 Citrus clementina cDNA clone IC0AAA60DB01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878391 ID=FC878391; Name=FC878391; organism=Citrus clementina; type=EST; length=877bp
CCACCGGCGAATAACAACACCAAAGATGCCCGTCTTCAAAACCCCATTTA
ACGGCTACTCCGTCAAATTCTCTCCCTTCTACGAGTCCCGTCTCGCCGTT
GCCACCGCCCAAAACTTCGGAATCCTCGGTAATGGCCGCGTCCACGTCCT
CGACCTCTCCCCCGCCGCTCCCGCTCTCACCGAACTAGTCGCCTTCGACA
CTGCCGACGGTGTTTACGACCTCGCATGGTCCGAATCCCACGACTCCCTC
CTAATCGCCGCCGTCGCCGATGGATCCGTTAAAATCTACGACACGGCCCT
CCCGCCAACGGCCAATCCCATCCGCTCCCTCCACGAGCACACTCGCGAAG
TCCACTCGGCCGATTATAACCCCACTCGACGTGATTCTTTCATCACATCG
TCCTGGGATGACACGGTTAAACTCTGGACCGTTGACCGGCCTACCAGTGT
GCGAACATTTAAAGAACACGCGTATTGCGTGTACAACGCCACGTGGAACC
CGCGTCACAGCGACGTGTTCTGTTCCGCGAGTGGGGACTGCACTCTTCGA
ATTTGGGATGTGAGAGAGATGGGCAGCACGATGATAATTCCGGCCCACGA
GTTTGAAATTTTAGCTTGTGATTGGAACAAGTACGATGACTGTTTAATTG
CGAGTGCTTCAGTTGATAAGAGTATTAAAATTTGGGATGTGAGGAACTAT
AGAGTTCCAATTGCTGTATTAAATGGACATGGCTATGCCGTGAGGAAAGT
GAAATTTTCACCGCACAGGAGGAATTTGTTAGCGTCTTGTTCGTATGACA
TGACTGTGTGCTTATGGGATTTCATGGTGGAGGATGCTTTGGTTGGGAGG
TATGATCATCACACTGAGTTTGCCGTT
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