FC878395
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878395 vs. ExPASy Swiss-Prot
Match: WIPI4_RAT (WD repeat domain phosphoinositide-interacting protein 4 OS=Rattus norvegicus GN=Wdr45 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.512e-23 Identity = 62/161 (38.51%), Postives = 90/161 (55.90%), Query Frame = 3 Query: 291 SVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKS-GGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDD------HQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVD-LKLLHQIETLANPRGLCCLSHHSSTSVLACPGLQRGQVRI 749 S+ +NQD CF G RIYN EP E D + G +VEML R N+LALVG G + ++ V+IWDD + + + EF F V +V++ D+IV+VL ++IYVYSF D + L + +T NP+GLC L +L PG + G +++ Sbjct: 11 SLHFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSVGLVEMLHRSNLLALVGGGSSPKFSEISVLIWDDAREGKDSKDKLVLEFTFTKPVLAVRMRHDKIVIVLRNRIYVYSFPDNPRKLFEFDTRDNPKGLCDLCPSLEKQLLVFPGHKCGSLQL 171
BLAST of FC878395 vs. ExPASy Swiss-Prot
Match: ATG18_KLULA (Autophagy-related protein 18 OS=Kluyveromyces lactis GN=ATG18 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.512e-23 Identity = 54/143 (37.76%), Postives = 90/143 (62.94%), Query Frame = 3 Query: 294 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACP 722 +++NQ+ C + GTS GF+I+NCEPF ++ + GG IVEMLF ++LA+VG GDN P ++ + + + I E F + + SVK+++ R+ V+L+ +IY+Y +++LLH IET N +G+ +S +S + L P Sbjct: 10 INFNQNGSCISMGTSQGFKIFNCEPFGRFYQDE--EGGCGIVEMLFSTSLLAVVGMGDNPAMSPRRLRMLNTKRHSVICEVTFPTTILSVKMNKSRLAVLLQEQIYIYDISNMRLLHTIETSMNAQGIMSMSPNSENNYLVYP 150
BLAST of FC878395 vs. ExPASy Swiss-Prot
Match: HSV2_SCHPO (SVP1-like protein 2 OS=Schizosaccharomyces pombe GN=hsv2 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.579e-23 Identity = 58/179 (32.40%), Postives = 95/179 (53.07%), Query Frame = 3 Query: 291 SVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSF-VDLKLLHQIETLANPRGLCCLSHHSSTSVLACPGLQRGQVRI-----EHFGLNMIKLINAHDSHIAC 809 +VS NQD C + G++I+ P K +R GG IV+MLFR N+L LVG G N +Y P K+I+WDD + R + E +++ + + + K+++Y F +LKL ++T NP+GLC + + + P + GQ++I +H + ++ AHDS I+C Sbjct: 6 TVSLNQDASCMSVALDTGYKIFQINPLKLRAQRQFNDGGLSIVKMLFRSNVLLLVGGGGNPKYAPNKLIVWDDVKERPVKELELNFEIKGICFDGKLLAIATASKLFLYQFGNNLKLQRCLDT-QNPKGLCAMVTTVEKTAIVFPSRKVGQLQILFLFKDHMNTS---IVPAHDSEISC 180
BLAST of FC878395 vs. ExPASy Swiss-Prot
Match: ATG18_ASHGO (Autophagy-related protein 18 OS=Ashbya gossypii GN=ATG18 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.399e-23 Identity = 56/143 (39.16%), Postives = 88/143 (61.54%), Query Frame = 3 Query: 294 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACP 722 +++NQ C + GTS G +I+NC+PF + + GG IVEMLF ++LA+VG GDN P ++ I + + I E F + + +VK++R R+VV+L+ +IY+Y ++LL+ IET +NPRGL +S + LA P Sbjct: 12 INFNQTGTCISMGTSEGLKIFNCDPFGRFYSDE--DGGCGIVEMLFSTSLLAVVGIGDNPSMSPRRLRILNTKRHSVICEVTFPTTILAVKMNRSRLVVLLQEQIYIYDINSMRLLYTIETSSNPRGLISMSPSLENNYLAYP 152
BLAST of FC878395 vs. ExPASy Swiss-Prot
Match: ATG18_ASPNC (Autophagy-related protein 18 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=atg18 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.863e-22 Identity = 70/198 (35.35%), Postives = 101/198 (51.01%), Query Frame = 3 Query: 294 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACPGLQR-----------------------GQVRI-EHFGLNMIKLINAHDSHIACFT 815 V++NQDY A TS GFRI+ +PF +++ + K G I+EMLF +++AL+ P ++ I + + I E F + V +VKL+R R+V+VLE +IY+Y +KLL+ IET NP LC LS S LA P Q+ G+V I + L I +I AH S +AC T Sbjct: 6 VTFNQDYSYLAVATSKGFRIFTTDPFAKSY--ETKEGNIAIIEMLFSTSLVALI-------LSPRRLQITNTKRQSTICELTFPTTVLAVKLNRKRLVIVLEDQIYLYDIQTMKLLYTIETSPNPNALCALSPSSDNCYLAYPLPQKAPPSTFQPPAHAPPGTTHVTPTSGEVLIFDTLKLEAINVIEAHRSPLACIT 194
BLAST of FC878395 vs. ExPASy Swiss-Prot
Match: HSV2_DEBHA (SVP1-like protein 2 OS=Debaryomyces hansenii GN=HSV2 PE=3 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 6.351e-22 Identity = 71/216 (32.87%), Postives = 103/216 (47.69%), Query Frame = 3 Query: 276 EIELISVSWNQDYGCFAAGTSCGFRIYNCEPF----KETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDL-KLLHQIETLANPRGLCCLSHHSSTSV----------------------------LACPGLQRGQVRIEHFG-----LNMIKLINAHDSHIAC 809 E++++++++NQD GCFA G GF +YN P K F + G + ML R N LALVG G N ++ K++IWDD + + F S V +V LSR RI+VVL++++ VY F K ET+ N GL LS + + S+ LA PG GQ++I N++ +I AH S I C Sbjct: 15 ELQILNINFNQDQGCFAVGHEYGFLVYNTNPIDIRVKRNFNINGHGSGIAHITMLHRTNYLALVGGGKNPKFANNKLVIWDDLKRKNSLNLEFMSPVLNVLLSRIRIIVVLKNQVLVYGFSSPPKKFATYETIENEFGLADLSVNFTNSIGNNLSTSNSSISSLVSNQVSYDSNKYQTLAFPGRSIGQIQIVDVSPSGQEKNLVSIIKAHKSKIRC 230
BLAST of FC878395 vs. ExPASy Swiss-Prot
Match: ATG18_ASPTN (Autophagy-related protein 18 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=atg18 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.295e-22 Identity = 69/198 (34.85%), Postives = 101/198 (51.01%), Query Frame = 3 Query: 294 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACPGLQR-----------------------GQVRI-EHFGLNMIKLINAHDSHIACFT 815 V++NQDY A TS GFRI+ +PF +++ + K G I+EMLF +++AL+ P ++ I + + I E F + V +VKL+R R+V+VLE +IY+Y +KLL+ IET NP +C LS S LA P Q+ G+V I + L I +I AH S +AC T Sbjct: 6 VTFNQDYSYLAVATSKGFRIFTTDPFAKSY--ETKEGNIAIIEMLFSTSLVALI-------LSPRRLQITNTKRQSTICELTFPTTVLAVKLNRKRLVIVLEDQIYLYDIQTMKLLYTIETSPNPNAICALSPSSDNCYLAYPLPQKAPPSSFNPPSHAPPGSTHVSPTTGEVLIFDALKLEAINVIEAHRSPLACIT 194
BLAST of FC878395 vs. ExPASy Swiss-Prot
Match: ATG18_MAGGR (Autophagy-related protein 18 OS=Magnaporthe grisea GN=ATG18 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.083e-21 Identity = 58/143 (40.56%), Postives = 82/143 (57.34%), Query Frame = 3 Query: 294 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACP 722 +++NQD+GC A GTS GFRIY+ EPF + F + G I+EMLF +++AL+ P +II + + I E F S V +V+L+R R+ VVLE +IY+Y ++ LL I T NP +C LS S LA P Sbjct: 9 ITFNQDHGCLAVGTSRGFRIYHTEPFSKIFSSE--DGNVSIIEMLFSTSLVALI-------LSPRHLIIQNTKRGSVICELTFPSAVLAVRLNRKRLAVVLEDEIYLYDIANMSLLFTIATSPNPSAICALSPSSENCFLAYP 142
BLAST of FC878395 vs. ExPASy Swiss-Prot
Match: ATG18_DICDI (Autophagy-related protein 18 OS=Dictyostelium discoideum GN=atg18 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.083e-21 Identity = 61/176 (34.66%), Postives = 107/176 (60.80%), Query Frame = 3 Query: 285 LISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACPGLQ-RGQVRI-EHFGLNMIKLINAHDSHIA 806 ++ +++NQD+ C A GT G++I+N +P+ T +GG +VEMLF +++++VG+GD + +++I + + I + F + + SVK++R RIVV++E KI++Y ++KLL E +NP+GLC LS S+T+ + P Q G + + + L + LI AH S I+ Sbjct: 11 ILFLNFNQDFSCIAVGTPEGYKIFNSDPY--TLYYSQSNGGAGLVEMLFSTSLVSIVGSGDGNT-SQRRLLINNIKNNIPICDLNFVTAILSVKMNRKRIVVIMETKIHIYDINNMKLLETREIASNPKGLCALS-PSNTNYIVYPASQNNGNILVMDVLTLETVNLIQAHKSQIS 182
BLAST of FC878395 vs. ExPASy Swiss-Prot
Match: ATG18_NEOFI (Autophagy-related protein 18 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=atg18 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.848e-21 Identity = 68/198 (34.34%), Postives = 101/198 (51.01%), Query Frame = 3 Query: 294 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACPGLQR-----------------------GQVRI-EHFGLNMIKLINAHDSHIACFT 815 V++NQDY A TS GFRI+ +PF +++ + K G I+EMLF +++AL+ P ++ I + + I E F + V +VKL+R R+V+VLE +IY+Y +KLL+ I+T NP +C LS S LA P Q+ G+V I + L I +I AH S +AC T Sbjct: 6 VTFNQDYSYLAVATSKGFRIFTTDPFAKSY--ETKEGNIAIIEMLFSTSLVALI-------LSPRRLQITNTKRQSTICELTFPTTVLAVKLNRKRLVIVLEDQIYLYDIQTMKLLYTIQTSPNPNAICALSPSSDNCYLAYPLPQKAPPSSFNPPSHTPPGSTHVSPTSGEVLIFDTLKLEAINVIEAHRSPLACIT 194 The following BLAST results are available for this feature:
BLAST of FC878395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878395 ID=FC878395; Name=FC878395; organism=Citrus clementina; type=EST; length=830bpback to top |