FC878395
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878395 vs. ExPASy Swiss-Prot
Match: WIPI1_XENLA (WD repeat domain phosphoinositide-interacting protein 1 OS=Xenopus laevis GN=wipi1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.126e-13 Identity = 54/182 (29.67%), Postives = 95/182 (52.20%), Query Frame = 3 Query: 282 ELISVSWNQDYGCFAAGTSCGFRIYNCEPFK--ETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQ-IETLANPRGLCCLSHHSSTSVLACPG-LQRGQVRIEHFGLNMIK---LINAHDSHIA 806 ++ +S+NQD A G G+++Y+ + + ++ IVE LF +++ +V S P ++ + + I + + ++ S++L+R R++V LE IY+++ D+KLL ++T NP GLC LS + S S LA PG G+V + + N +K I AHDS +A Sbjct: 12 DICCLSYNQDCTSVAIGMRSGYKLYSLSNVERLDLVHESCEAKDVYIVERLFSSSLVVVV-----SHAKPRQMNVLHFKKGTEICNYNYSDNILSIRLNRQRLIVCLEESIYIHNIKDMKLLKTLLDTPRNPHGLCTLSINHSNSYLAYPGSSSTGEVSL--YDANCLKCECTIPAHDSPLA 186
BLAST of FC878395 vs. ExPASy Swiss-Prot
Match: WIPI2_HUMAN (WD repeat domain phosphoinositide-interacting protein 2 OS=Homo sapiens GN=WIPI2 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.048e-12 Identity = 47/134 (35.07%), Postives = 77/134 (57.46%), Query Frame = 3 Query: 414 IVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQI-ETLANPRGLCCLSHHSSTSVLACPGLQR-GQVRI-EHFGLNMIKLINAHDSHIA 806 IVE LF +++A+V S P K+ + + I +++ + + +VKL+R R++V LE +Y+++ D+K+LH I ET NP GLC LS ++ LA PG G+V++ + L +I AHDS +A Sbjct: 78 IVERLFSSSLVAIV-----SLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLYIHNIRDMKVLHTIRETPPNPAGLCALSINNDNCYLAYPGSATIGEVQVFDTINLRAANMIPAHDSPLA 206
BLAST of FC878395 vs. ExPASy Swiss-Prot
Match: ATG18_AJECN (Autophagy-related protein 18 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=ATG18 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.048e-12 Identity = 54/171 (31.58%), Postives = 82/171 (47.95%), Query Frame = 3 Query: 378 TFRRD---LKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACPGLQR-----------------------GQVRI-EHFGLNMIKLINAHDSHIAC 809 TF +D L G I+EMLF +++AL+ P ++ I + + I E F + V +V+L+R R+V+VLE +IY+Y +KLL+ IET NP +C LS S LA P Q+ G+V I + L I ++ AH S ++C Sbjct: 7 TFNQDYSYLAVGNIAILEMLFSTSLVALI-------LSPRRLQITNTKRQSTICELTFPTTVLAVRLNRKRLVIVLEDQIYLYDIQTMKLLYTIETSPNPNAICALSPSSENCYLAYPLPQKAPPSSFTPPSHAPPSSAHISPTSGEVLIFDTLKLEAINVVEAHKSPLSC 170
BLAST of FC878395 vs. ExPASy Swiss-Prot
Match: HSV2_CANAL (SVP1-like protein 2 OS=Candida albicans GN=HSV2 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.782e-12 Identity = 50/141 (35.46%), Postives = 69/141 (48.94%), Query Frame = 3 Query: 303 NQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSG-----GFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSF-VDLKLLHQIETLANPRGLCCLSHHSSTS 707 N G + +S G +K T + SG G + ML R N LAL+G G+N ++P K+IIWDD + + F + V +V LSR RI+VVL +I VY F K T+ NP G+ LS +S S Sbjct: 96 NNSTGSNGSVSSSGSNNETTLGYKSTHKSASGSGSGSGSGIGHISMLHRTNYLALIGGGENPKFPINKLIIWDDLKRKTSLSLEFDTPVLNVLLSRVRIIVVLIDQIIVYGFAAPPKKFQTFNTINNPLGIADLSVNSQQS 236 The following BLAST results are available for this feature:
BLAST of FC878395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878395 ID=FC878395; Name=FC878395; organism=Citrus clementina; type=EST; length=830bpback to top |