FC878402
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878402 vs. ExPASy Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 5.389e-38 Identity = 95/252 (37.70%), Postives = 128/252 (50.79%), Query Frame = 2 Query: 167 VAQDGTGHYRTVQEAIDRVPLCNTCRTLIRISPGVYRQPVYVPKTKNLITLAGRCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCK-----SQGFITAQSRKSSQETTGYVFLRCVITG------NGGTGYMYLGRPWGPFGRVVFAFTYMDQCIRHVXWHNW 889 VA DGTG++ T+ +A+ P +T R +I + GVY + V + K K I + G + TV+T N + + G TF + V G F+A +ITF+N+A QAVAIR D FY C G+QDTLY H +Q+ ++C I G+VDFIFG++TA+ + C I K + ITAQ RK E TG+ I N T YLGRPW + R VF YM I V W W Sbjct: 217 VAADGTGNFTTISDAVLAAPDYSTKRYVIHVKRGVYVENVEIKKKKWNIMMVGDGIDATVITGNRSF----------IDGWTTFRSATFAVSGRGFIARDITFQNTAGPEKHQAVAIRSDTDLGVFYRCAMRGYQDTLYAHSMRQFFRECIITGTVDFIFGDATAVFQSCQIKAKQGLPNQKNSITAQGRKDPNEPTGFTIQFSNIAADTDLLLNLNTTATYLGRPWKLYSRTVFMQNYMSDAINPVGWLEW 458
BLAST of FC878402 vs. ExPASy Swiss-Prot
Match: PME13_ARATH (Probable pectinesterase/pectinesterase inhibitor 13 OS=Arabidopsis thaliana GN=PME13 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 5.389e-38 Identity = 89/253 (35.18%), Postives = 138/253 (54.55%), Query Frame = 2 Query: 164 TVAQDGTGHYRTVQEAIDRVPLCNTCRTLIRISPGVYRQPVYVPKTKNLITLAGRCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCK-----SQGFITAQSRKSSQETTGYVFLRCVITGNGGTGYM------YLGRPWGPFGRVVFAFTYMDQCIRHVXWHNW 889 TVA+DG+G + T+ +A+ +P R +I + G+Y + V V K K +T+ G + T++T N + H + R T TF + +GE F+A+++ F N+A QAVAIRV +DR F NCRF G+QDTLY + +QY + C I G++DFIFG++ A+ ++C+I + + +TAQ R +TTG+V C I N + YLGRPW + R + + ++ I V W W Sbjct: 303 TVAKDGSGDFTTINDALRAMPEKYEGRYIIYVKQGIYDEYVTVDKKKANLTMVGDGSQKTIVTGNKS-----HAKKIRTFLTATF-----VAQGEGFMAQSMGFRNTAGSEGHQAVAIRVQSDRSIFLNCRFEGYQDTLYAYTHRQYYRSCVIVGTIDFIFGDAAAIFQNCNIFIRKGLPGQKNTVTAQGRVDKFQTTGFVVHNCKIAANEDLKPVKEEYKSYLGRPWKNYSRTIIMESKIENVIDPVGWLRW 545
BLAST of FC878402 vs. ExPASy Swiss-Prot
Match: PME56_ARATH (Probable pectinesterase 56 OS=Arabidopsis thaliana GN=PME56 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 9.192e-38 Identity = 87/249 (34.94%), Postives = 135/249 (54.22%), Query Frame = 2 Query: 167 VAQDGTGHYRTVQEAIDRVPLCNTCRTLIRISPGVYRQPVYVPKTKNLITLAGRCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQG-----FITAQSRKSSQETTGYVFLRCVITGNG------GTGYMYLGRPWGPFGRVVFAFTYMDQCIRHVXW 880 VA+DG+G++ TV EA+ P +I I G+Y++ + + K K +TL G + TVL+ + V G TF ++ V+ F+A+++ N+A QAVA+R++ D Y CR +QDTLY + G+Q+ +DCYI G+VDFIFG + A+ ++C I + G +TAQSR+ T+G+ F +C I+ + GT +LGRPW F RVVF +++D I W Sbjct: 48 VAKDGSGNFTTVNEAVAAAPENGVKPFVIYIKEGLYKEVIRIGKKKTNLTLVGDGRDLTVLSGDLNG----------VDGIKTFDSATLAVDESGFMAQDLCIRNTAGPEKRQAVALRISTDMTIIYRCRIDAYQDTLYAYSGRQFYRDCYITGTVDFIFGRAAAVFQYCQIEARKPGIGQTNILTAQSREEDTATSGFSFQKCNISASSDLTPIKGTVKTFLGRPWRAFSRVVFMESFIDDVIDRAGW 286
BLAST of FC878402 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 3.493e-37 Identity = 86/254 (33.86%), Postives = 135/254 (53.15%), Query Frame = 2 Query: 161 VTVAQDGTGHYRTVQEAIDRVPLCNTCRTLIRISPGVYRQPVYVPKTKNLITLAGRCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQG-----FITAQSRKSSQETTGYVFLRCVITGNG------GTGYMYLGRPWGPFGRVVFAFTYMDQCIRHVXWHNW 889 V VA+DGTG ++TV EA+ P + R +I + GVY++ + + K K + L G + T++T + + G+ TF +V G+ F+A++I F+N+A QAVA+RV+AD+ CR +QDTLY H +Q+ +D YI G+VDFIFGNS + ++C I ++ G +TAQ R+ + T +C IT + G+ +LGRPW + R V +++D I W W Sbjct: 247 VVVAKDGTGKFKTVNEAVAAAPENSNTRYVIYVKKGVYKETIDIGKKKKNLMLVGDGKDATIITGSLNV----------IDGSTTFRSATVAANGDGFMAQDIWFQNTAGPAKHQAVALRVSADQTVINRCRIDAYQDTLYTHTLRQFYRDSYITGTVDFIFGNSAVVFQNCDIVARNPGAGQKNMLTAQGREDQNQNTAISIQKCKITASSDLAPVKGSVKTFLGRPWKLYSRTVIMQSFIDNHIDPAGWFPW 490
BLAST of FC878402 vs. ExPASy Swiss-Prot
Match: PME41_ARATH (Probable pectinesterase/pectinesterase inhibitor 41 OS=Arabidopsis thaliana GN=PME41 PE=2 SV=2) HSP 1 Score: 154.066 bits (388), Expect = 1.016e-36 Identity = 90/262 (34.35%), Postives = 133/262 (50.76%), Query Frame = 2 Query: 146 MASCVVTVAQDGTGHYRTVQEAIDRVPLCNTCRT---LIRISPGVYRQPVYVPKTKNLITLAGRCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQ-----GFITAQSRKSSQETTGYVFLRCVI------TGNGGTGYMYLGRPWGPFGRVVFAFTYMDQCIRHVXWHNW 889 + S +VTV Q+GTG++ T+ EA++ P +I ++ GVY + V + K K + + G TV+T N V G TF + V +FVA N+TF N+A QAVA+R +AD FY+C F +QDTLY H +Q+ ++C I G+VDFIFGN+ + + C+++ + ITAQ R + TG C I + T YLGRPW + R VF +Y+D+ + V W W Sbjct: 254 LVSDIVTVNQNGTGNFTTITEAVNSAPNKTDGTAGYFVIYVTSGVYEENVVIAKNKRYLMMIGDGINRTVVTGNRNV----------VDGWTTFNSATFAVTSPNFVAVNMTFRNTAGPEKHQAVAMRSSADLSIFYSCSFEAYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQDCNLYPRQPMQNQFNAITAQGRTDPNQNTGISIHNCTIKPADDLVSSNYTVKTYLGRPWKEYSRTVFMQSYIDEVVEPVGWREW 505
BLAST of FC878402 vs. ExPASy Swiss-Prot
Match: PME51_ARATH (Probable pectinesterase/pectinesterase inhibitor 51 OS=Arabidopsis thaliana GN=PME51 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.957e-36 Identity = 98/265 (36.98%), Postives = 137/265 (51.70%), Query Frame = 2 Query: 161 VTVAQDGTGHYRTVQEAIDRVPLCNTCRT-LIRISPGVYRQPVYVPKTKNLITLAGRCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHI---------HCKSQGFITAQSRKSSQETTGYVFLRCVITGNGGTGYM------------YLGRPWGPFGRVVFAFTYMDQCIRHVXWHNW 889 VTV +DG Y+TVQ+A++ P N R +I+IS GVY + V VP K + G TV+T + A + G T+ +V V G+ F+A ++TF+N+A + QAVA R +D NC FLG QDTLY H +Q+ K+C I+G+VDFIFGNS A+ + C I + +TAQ R ++TG+VFL C+I NG YM +LGRPW + R VF ++ I W W Sbjct: 241 VTVCKDGKCGYKTVQDAVNAAPEDNGMRKFVIKISEGVYEENVIVPFEKKNVVFIGDGMGKTVITGSLNAG---------MPGITTYNTATVGVVGDGFMARDLTFQNTAGPDAHQAVAFRSDSDFSLIENCEFLGNQDTLYAHGLRQFYKNCRIQGNVDFIFGNSAAVFQDCEILIAPRQINPEKGEKNAVTAQGRIDPSQSTGFVFLNCLI--NGTEEYMKLFKANPKVHKNFLGRPWKDYSRTVFIGCNLEALITPDGWLPW 494
BLAST of FC878402 vs. ExPASy Swiss-Prot
Match: PME_MEDSA (Pectinesterase/pectinesterase inhibitor OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.862e-36 Identity = 85/240 (35.42%), Postives = 129/240 (53.75%), Query Frame = 2 Query: 167 VAQDGTGHYRTVQEAIDRVPLCNTCRTLIRISPGVYRQPVYVPKTKNLITLAGRCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCK-----SQGFITAQSRKSSQETTGYVFLRCVITGNGGTGYM-----YLGRPWGPFGRVVFAFTYMD 856 VAQDG+G ++T+ +A+ VP N +I + GVY++ V V K N +T+ G P T T + + + T TFG V G +F+A++I FEN+A G QAVA+RVTAD+ FYNC+ G+QDTLY+ +Q+ +DC I G++DF+FG + ++C + C+ Q +TA R+ + VF TG + YLGRPW + +VV + +D Sbjct: 134 VAQDGSGQFKTLTDALKTVPPKNAVPFVIHVKAGVYKETVNVAKEMNYVTVIGDGPTKTKFTGS-----LNYADGINTYNTATFG-----VNGANFMAKDIGFENTAGTGKHQAVALRVTADQAIFYNCQMDGFQDTLYVQSQRQFYRDCSISGTIDFVFGERFGVFQNCKLVCRLPAKGQQCLVTAGGREKQNSASALVFQSSHFTGEPALTSVTPKVSYLGRPWKQYSKVVIMDSTID 363
BLAST of FC878402 vs. ExPASy Swiss-Prot
Match: PME42_ARATH (Probable pectinesterase/pectinesterase inhibitor 42 OS=Arabidopsis thaliana GN=PME42 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.862e-36 Identity = 87/252 (34.52%), Postives = 129/252 (51.19%), Query Frame = 2 Query: 161 VTVAQDGTGHYRTVQEAIDRVPLCNTCRTLIRISPGVYRQPVYVPKTKNLITLAGRCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCK-----SQGFITAQSRKSSQETTGYVFLRCVITGNG----GTGYMYLGRPWGPFGRVVFAFTYMDQCIRHVXWHNW 889 V VA+DGTG Y TV AI P + R +I I G+Y + V + TK +TL G ++T++T N +A+ + R T TF G+ F+ ++ F N+ G AVA+RV+ D Y CR G+QD LY H +Q+ ++C+I G+VDFI GN+ A+ + C I + FITAQSR++ + +G+ C IT + T YLGRPW F V +++ + W W Sbjct: 216 VVVAKDGTGKYNTVNAAIAAAPQHSHKRFIIYIKTGIYDEIVAIENTKPNLTLIGDGQDSTIITGNLSASNVR-----RTFYTATFASN-----GKGFIGVDMCFRNTVGPAKGPAVALRVSGDMSVIYRCRVEGYQDALYPHIDRQFYRECFITGTVDFICGNAAAVFQFCQIVARQPNMGQSNFITAQSRETKDDKSGFSIQNCNITASSDLDTATVKTYLGRPWRIFSTVAVLQSFIGDLVDPAGWTPW 457
BLAST of FC878402 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 8.604e-36 Identity = 90/253 (35.57%), Postives = 129/253 (50.99%), Query Frame = 2 Query: 167 VAQDGTGHYRTVQEAIDRVPLCNTCRTLIRISPGVYRQPVYVPKTKNLITLAGRCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCK-----SQGFITAQSRKSSQETTGYVFLRCVITGNG-------GTGYMYLGRPWGPFGRVVFAFTYMDQCIRHVXWHNW 889 VAQDGTG++ V +A+ P + R +I I G Y++ V + K K + + G + T+++ N + V G TF + V G F+A +ITFEN+A QAVA+R +D FY C G+QDTLY H +Q+ +DC I G+VDFIFG++T + ++C I K + ITAQ RK E TG C IT + + YLGRPW + R V +++ IR W W Sbjct: 211 VAQDGTGNFTNVTDAVLAAPDYSMRRYVIYIKRGTYKENVEIKKKKWNLMMIGDGMDATIISGNRSF----------VDGWTTFRSATFAVSGRGFIARDITFENTAGPEKHQAVALRSDSDLSVFYRCNIRGYQDTLYTHTMRQFYRDCKISGTVDFIFGDATVVFQNCQILAKKGLPNQKNSITAQGRKDPNEPTGISIQFCNITADSDLEAASVNSTPTYLGRPWKLYSRTVIMQSFLSNVIRPEGWLEW 453
BLAST of FC878402 vs. ExPASy Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.917e-35 Identity = 84/253 (33.20%), Postives = 133/253 (52.57%), Query Frame = 2 Query: 161 VTVAQDGTGHYRTVQEAIDRVPLCNTCRTLIRISPGVYRQPVYVPKTKNLITLAGRCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKS----QGFITAQSRKSSQETTGYVFLRCVITGNG------GTGYMYLGRPWGPFGRVVFAFTYMDQCIRHVXWHNW 889 + VAQDG+G+ +T+QEA+ R +I I G Y + + V K KN++ G T++T + + G TF +V V G++F+A +IT N+A + QAVA+R +D FY C F G+QDTLY+H +Q+ ++C I G+VDFIFGN+ ++++C+I + +TAQ R ++TG + C +T + +LGRPW + R V+ T++D I W W Sbjct: 203 IVVAQDGSGNVKTIQEAVAAASRAGGSRYVIYIKAGTYNENIEV-KLKNIM-FVGDGIGKTIITGSKSVGG----------GATTFKSATVAVVGDNFIARDITIRNTAGPNNHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSQRQFYRECDIYGTVDFIFGNAAVVLQNCNIFARKPPNRTNTLTAQGRTDPNQSTGIIIHNCRVTAASDLKPVQSSVKTFLGRPWKQYSRTVYIKTFLDSLINPAGWMEW 443 The following BLAST results are available for this feature:
BLAST of FC878402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878402 ID=FC878402; Name=FC878402; organism=Citrus clementina; type=EST; length=891bpback to top |