FC878404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878404 vs. ExPASy Swiss-Prot
Match: S61A1_HUMAN (Protein transport protein Sec61 subunit alpha isoform 1 OS=Homo sapiens GN=SEC61A1 PE=1 SV=2) HSP 1 Score: 437.958 bits (1125), Expect = 3.445e-122 Identity = 218/235 (92.77%), Postives = 227/235 (96.60%), Query Frame = 3 Query: 174 MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPATVNTGRGTEFEGAVIALFHLLATRPDNVRALREAFY 878 M IKFLEVIKPFC ILPEI KPERKIQF+EKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYW+RVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGM+IT+GQ+IVYVMTGMYG+PSE+GAG+CLLI IQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSP TVNTGRG EFEGA+IALFHLLATR D VRALREAFY Sbjct: 1 MAIKFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMIITIGQSIVYVMTGMYGDPSEMGAGICLLITIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTVNTGRGMEFEGAIIALFHLLATRTDKVRALREAFY 235
BLAST of FC878404 vs. ExPASy Swiss-Prot
Match: S61A1_CANFA (Protein transport protein Sec61 subunit alpha isoform 1 OS=Canis familiaris GN=SEC61A1 PE=1 SV=3) HSP 1 Score: 437.958 bits (1125), Expect = 3.445e-122 Identity = 218/235 (92.77%), Postives = 227/235 (96.60%), Query Frame = 3 Query: 174 MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPATVNTGRGTEFEGAVIALFHLLATRPDNVRALREAFY 878 M IKFLEVIKPFC ILPEI KPERKIQF+EKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYW+RVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGM+IT+GQ+IVYVMTGMYG+PSE+GAG+CLLI IQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSP TVNTGRG EFEGA+IALFHLLATR D VRALREAFY Sbjct: 1 MAIKFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMIITIGQSIVYVMTGMYGDPSEMGAGICLLITIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTVNTGRGMEFEGAIIALFHLLATRTDKVRALREAFY 235
BLAST of FC878404 vs. ExPASy Swiss-Prot
Match: SC61A_HALRO (Protein transport protein Sec61 subunit alpha OS=Halocynthia roretzi PE=2 SV=1) HSP 1 Score: 436.417 bits (1121), Expect = 1.002e-121 Identity = 214/235 (91.06%), Postives = 229/235 (97.45%), Query Frame = 3 Query: 174 MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPATVNTGRGTEFEGAVIALFHLLATRPDNVRALREAFY 878 MG KFLEVIKPFC ILPEI KP+RKIQFREKVLWTAITLFIFLVCCQIPLFGIMSS+SADPFYW+RVI+ASNRGTLMELGI+PIVTSGLIMQLLAGAK+IEVGDTPKDRALFNGAQKLFGM+IT+GQA+VYVMTGMYG+PS++GAG+CLLIIIQLF+A LIVLLLDELLQKGYGLGSGISLFIATNICETIVWK+FSPATVNTGRGTEFEGAVIALFHLLATR D VRALREAFY Sbjct: 1 MGFKFLEVIKPFCIILPEIEKPQRKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSESADPFYWMRVIMASNRGTLMELGITPIVTSGLIMQLLAGAKLIEVGDTPKDRALFNGAQKLFGMIITIGQAVVYVMTGMYGDPSDMGAGICLLIIIQLFIASLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKSFSPATVNTGRGTEFEGAVIALFHLLATRSDKVRALREAFY 235
BLAST of FC878404 vs. ExPASy Swiss-Prot
Match: SC61A_DICDI (Protein transport protein Sec61 subunit alpha OS=Dictyostelium discoideum GN=sec61a PE=3 SV=1) HSP 1 Score: 358.221 bits (918), Expect = 3.469e-98 Identity = 171/236 (72.46%), Postives = 206/236 (87.29%), Query Frame = 3 Query: 174 MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPATVNTGRGTEFEGAVIALFHLLATRPDNVRALREAFY 878 MG +FL+++KPF S++PE+ +P+RKI FREKVLWTAI LFIFLVC QIPL+GI S+DS+DPFYW +VI+ASNRGTLMELGISPIVTSG++MQLLAGAK+IE+ + K DR LF+ AQKLFGM+I VGQ + Y+ +G YG+P+ +G G C LI++QLF AG+IV+LLDELLQKGYG+GSGISLFIATNICETIVWK FSP TV+ G+GTEFEGAVIALFHLL TR D VRAL+EAFY Sbjct: 1 MGFRFLDIVKPFTSLVPEVGQPDRKIPFREKVLWTAICLFIFLVCSQIPLYGIRSTDSSDPFYWAKVIMASNRGTLMELGISPIVTSGMVMQLLAGAKLIEIDQSVKADRDLFSAAQKLFGMLICVGQGVAYIWSGSYGDPAVLGFGNCFLIVLQLFFAGIIVMLLDELLQKGYGIGSGISLFIATNICETIVWKTFSPTTVSVGKGTEFEGAVIALFHLLLTRNDKVRALKEAFY 236
BLAST of FC878404 vs. ExPASy Swiss-Prot
Match: SC61A_PYRSA (Protein transport protein Sec61 subunit alpha OS=Pyrenomonas salina PE=2 SV=1) HSP 1 Score: 332.028 bits (850), Expect = 2.663e-90 Identity = 153/235 (65.11%), Postives = 202/235 (85.96%), Query Frame = 3 Query: 177 GIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGD-TPKDRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPATVNTGRGTEFEGAVIALFHLLATRPDNVRALREAFY 878 G++FL ++KPF LPE++ +KI EK+LWT+I +F++LVCCQIPL+GI ++ S+DPFYW+RVILASN+GTLMELGISPIVTSGL+MQLLAG+KII+V T +D+ LF GAQKL G++IT+G+++ YV++GMYG+ ++GAG +LII+QLF +G+IV+ LDELLQKGYG+GS ISLFIATN+CE+IVWK+FSP T+NTGRGTEFEGA++ALF L+ T+ D VRAL+EAFY Sbjct: 5 GVRFLTLVKPFMFALPEVSSATKKIPVNEKLLWTSIVVFLYLVCCQIPLYGITNTKSSDPFYWMRVILASNKGTLMELGISPIVTSGLVMQLLAGSKIIDVDQGTKEDKTLFQGAQKLLGILITIGESVAYVLSGMYGDVKDLGAGNAILIIVQLFTSGIIVICLDELLQKGYGIGSAISLFIATNVCESIVWKSFSPTTINTGRGTEFEGALVALFQLMITKTDKVRALQEAFY 239
BLAST of FC878404 vs. ExPASy Swiss-Prot
Match: SC61A_NEUCR (Protein transport protein SEC61 subunit alpha OS=Neurospora crassa GN=sec-61 PE=3 SV=1) HSP 1 Score: 316.235 bits (809), Expect = 1.512e-85 Identity = 148/234 (63.25%), Postives = 195/234 (83.33%), Query Frame = 3 Query: 180 IKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPATVNTGRGTEFEGAVIALFHLLATRPDNVRALREAFY 878 ++FL+++KPF LPE+ +PE KI F +K++WT +TL IFLV Q+PL+GI+SSD++DP YW+R+++ASNRGTLMELGI+PI++SG++ QLLAG +I+V D DR L+ AQKLF +++++G A VYV TG+YG PS++GAG+ L+I+QL VAG+IV+LLDELLQKGYGLGSGISLFIATNICE+I+WKAFSP ++NTGRG E+EGAVIALFHLL T + RAL EAFY Sbjct: 4 LRFLDLVKPFVPFLPEVQQPETKIPFNQKLMWTGLTLLIFLVMSQMPLYGIVSSDTSDPLYWLRMMMASNRGTLMELGITPIISSGMVFQLLAGTHMIDVNLDLKADRELYQTAQKLFAVILSIGTATVYVFTGLYGPPSDLGAGIVFLLILQLVVAGMIVILLDELLQKGYGLGSGISLFIATNICESIMWKAFSPTSINTGRGPEYEGAVIALFHLLMTWDNKQRALYEAFY 237
BLAST of FC878404 vs. ExPASy Swiss-Prot
Match: SC61A_YARLI (Protein transport protein SEC61 subunit alpha OS=Yarrowia lipolytica GN=SEC61 PE=3 SV=2) HSP 1 Score: 314.694 bits (805), Expect = 4.399e-85 Identity = 148/234 (63.25%), Postives = 189/234 (80.77%), Query Frame = 3 Query: 177 GIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPATVNTGRGTEFEGAVIALFHLLATRPDNVRALREAF 875 G++FL+++KPF LPE+ PERK+ F +K++WTA+TL IFLV +IPL+GI SSD +D YW+R++LASNRG+LMELGI+PIV+SG++ QLL G ++IEV D DR L+ AQKLF +++++GQA VYV+TGMYG P ++G GVCLL+I QL +A L+V+LLDELLQKGYGLGSGISLFIATNICE I WKAF+P TVN GRG EFEGA++A HLL TR D RA+ EAF Sbjct: 3 GVRFLDLVKPFTPFLPEVQAPERKVPFNQKIMWTAVTLMIFLVMSEIPLYGINSSDKSDALYWLRMMLASNRGSLMELGITPIVSSGMVFQLLGGTQLIEVNMDLKSDRELYQTAQKLFAIILSLGQATVYVLTGMYGPPKDLGVGVCLLLIFQLVLAALVVILLDELLQKGYGLGSGISLFIATNICEQIFWKAFAPTTVNKGRGYEFEGAIVAFVHLLFTRKDKKRAIIEAF 236
BLAST of FC878404 vs. ExPASy Swiss-Prot
Match: SC61A_HANAN (Protein transport protein SEC61 subunit alpha OS=Hansenula anomala GN=SEC61 PE=3 SV=1) HSP 1 Score: 313.923 bits (803), Expect = 7.504e-85 Identity = 147/233 (63.09%), Postives = 192/233 (82.40%), Query Frame = 3 Query: 183 KFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPATVNTGRGTEFEGAVIALFHLLATRPDNVRALREAFY 878 + L+++KP LPE+ PERK+ F +K++WT +TL IFLV +IPL+GI+SS+S+DP +W+R++LASNRGTLMELGISPIV+SG++ QLL G ++++V ++ DR F AQKLF +++++GQA VYV+TG+YG PS++G GVCLL+I+QL AG+IV+LLDELLQKGYGLGSGISLF+ATNICE I WKAF+P TVN GRG EFEGAV+ALFHLL+ R D RAL EAFY Sbjct: 5 RVLDLVKPLTGYLPEVIAPERKVPFNQKLMWTGVTLLIFLVMSEIPLYGIVSSESSDPLFWLRMMLASNRGTLMELGISPIVSSGMVFQLLQGTQLLDVNLESKTDRETFQTAQKLFAILLSIGQATVYVLTGIYGRPSDLGVGVCLLLILQLVFAGIIVILLDELLQKGYGLGSGISLFMATNICEQIFWKAFAPTTVNNGRGDEFEGAVVALFHLLSVRKDKRRALVEAFY 237
BLAST of FC878404 vs. ExPASy Swiss-Prot
Match: SC61A_DEBHA (Protein transport protein SEC61 subunit alpha OS=Debaryomyces hansenii GN=SEC61 PE=3 SV=1) HSP 1 Score: 313.923 bits (803), Expect = 7.504e-85 Identity = 147/235 (62.55%), Postives = 189/235 (80.43%), Query Frame = 3 Query: 177 GIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPATVNTGRGTEFEGAVIALFHLLATRPDNVRALREAFY 878 G + L+++KPF +PE+ PERK+ F+++++WT +TL IFLV +IPL+GI SSD +DP YW+R++LASNRGTLMELGISPIV++G++ QLL G K+I V + K DR F AQKLF +++ VGQA VYV+TGMYG PS +G GVCLL+++QL AG++V+LLDELLQKGYGLGSGISLF ATN+CE + WKAF+P T N G+GTEFEGAV+ALFHLL +R D RAL EAFY Sbjct: 3 GFRVLDLVKPFTPFMPEVIAPERKVAFQQRLMWTGVTLLIFLVMSEIPLYGIASSDGSDPLYWLRMMLASNRGTLMELGISPIVSAGMVFQLLQGTKLITVDMSNKNDRDQFQTAQKLFAILLAVGQATVYVLTGMYGPPSSLGTGVCLLLVLQLVFAGIVVILLDELLQKGYGLGSGISLFTATNVCEQVFWKAFAPTTSNIGKGTEFEGAVVALFHLLGSRKDKKRALLEAFY 237
BLAST of FC878404 vs. ExPASy Swiss-Prot
Match: SC61A_CANAL (Protein transport protein SEC61 subunit alpha OS=Candida albicans GN=SEC61 PE=3 SV=1) HSP 1 Score: 303.523 bits (776), Expect = 1.014e-81 Identity = 146/235 (62.13%), Postives = 184/235 (78.30%), Query Frame = 3 Query: 177 GIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPATVNTGRGTEFEGAVIALFHLLATRPDNVRALREAFY 878 G + L+++KPF LPE+ PERK+QF+++V+WT ITL IFLV +IPL+GI SSDS+DP +W+R++LASNRGTLMELGISPIV+SG++ QLL G KII V K DR F AQKL +++ VGQA VYV+TGMYG PS +G GVC L+I+QL A IV+LLDELLQKGYGLGSG+SLF ATN CE + WKAF+P T + +GTEF+GAV+A+FHLL +R D RAL E+FY Sbjct: 3 GFRVLDLVKPFSPFLPEVIAPERKVQFQQRVMWTIITLLIFLVMSEIPLYGIASSDSSDPLFWLRMMLASNRGTLMELGISPIVSSGMLFQLLQGTKIIHVDMQNKNDRETFQTAQKLLAILLAVGQATVYVLTGMYGPPSSLGVGVCSLLILQLVFASTIVILLDELLQKGYGLGSGVSLFTATNTCEQVFWKAFAPTTSTSAKGTEFDGAVVAMFHLLGSRKDKKRALIESFY 237 The following BLAST results are available for this feature:
BLAST of FC878404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878404 ID=FC878404; Name=FC878404; organism=Citrus clementina; type=EST; length=878bpback to top |