FC878404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878404 vs. ExPASy Swiss-Prot
Match: SC61A_CANGA (Protein transport protein SEC61 subunit alpha OS=Candida glabrata GN=SEC61 PE=3 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 5.209e-78 Identity = 141/236 (59.75%), Postives = 181/236 (76.69%), Query Frame = 3 Query: 174 MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPATVNTGRGTEFEGAVIALFHLLATRPDNVRALREAFY 878 M + L + KPF + LPE+ PERK+ + +K++WT ++L IFLV QIPL+GI+S++++DP YW+R +LASNRGTLMELG+SPI+TS +I Q L G ++++V D+ +DR L+ AQK+ +++T GQA+V VMTG YG PS++G + LL+I QL A IVLLLDELL KGYGLGSGISLF ATNI E I WKAF+P TVN+GRG EFEGAVIA FHLLA R D RAL EAFY Sbjct: 1 MSDRILSLFKPFEAFLPEVISPERKVPYNQKLIWTGVSLLIFLVLGQIPLYGIVSAETSDPLYWLRAMLASNRGTLMELGVSPIITSSMIFQFLQGTQLLQVSLDSKEDRELYQIAQKVCAIILTFGQALVVVMTGNYGSPSDLGIAISLLLIFQLMFASFIVLLLDELLTKGYGLGSGISLFTATNIAENIFWKAFAPTTVNSGRGKEFEGAVIAFFHLLAVRKDKKRALVEAFY 236
BLAST of FC878404 vs. ExPASy Swiss-Prot
Match: SC61A_YEAST (Protein transport protein SEC61 OS=Saccharomyces cerevisiae GN=SEC61 PE=1 SV=1) HSP 1 Score: 290.426 bits (742), Expect = 8.884e-78 Identity = 138/233 (59.23%), Postives = 183/233 (78.54%), Query Frame = 3 Query: 183 KFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPATVNTGRGTEFEGAVIALFHLLATRPDNVRALREAFY 878 + L++ KPF S LPE+ PERK+ + +K++WT ++L IFL+ QIPL+GI+SS+++DP YW+R +LASNRGTL+ELG+SPI+TS +I Q L G +++++ ++ +DR LF AQK+ +++ +GQA+V VMTG YG PS++G +CLL+I QL A LIV+LLDELL KGYGLGSGISLF ATNI E I W+AF+P TVN+GRG EFEGAVIA FHLLA R D RAL EAFY Sbjct: 5 RVLDLFKPFESFLPEVIAPERKVPYNQKLIWTGVSLLIFLILGQIPLYGIVSSETSDPLYWLRAMLASNRGTLLELGVSPIITSSMIFQFLQGTQLLQIRPESKQDRELFQIAQKVCAIILILGQALVVVMTGNYGAPSDLGLPICLLLIFQLMFASLIVMLLDELLSKGYGLGSGISLFTATNIAEQIFWRAFAPTTVNSGRGKEFEGAVIAFFHLLAVRKDKKRALVEAFY 237
BLAST of FC878404 vs. ExPASy Swiss-Prot
Match: SC61A_KLULA (Protein transport protein SEC61 subunit alpha OS=Kluyveromyces lactis GN=SEC61 PE=3 SV=1) HSP 1 Score: 289.271 bits (739), Expect = 1.979e-77 Identity = 140/236 (59.32%), Postives = 182/236 (77.12%), Query Frame = 3 Query: 174 MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPATVNTGRGTEFEGAVIALFHLLATRPDNVRALREAFY 878 M + L++ KPF + LPE+ PER + +++K++WT ++L +FLV QIPL+GI+SS+++DP YW+R +LASNRGTLMELG+SPI+TS +I Q L G ++++V + +DR L+ AQK+F +++T GQAIV V+TG YG+PS++G + LL+I QL A VLLLDELL KGYGLGSGISLF ATNI E I WKAF+P TVN GRG EFEGAVIALFHLLA R D RAL EAFY Sbjct: 1 MSGRVLDLFKPFEAYLPEVIAPERPVPYKQKLIWTGVSLLVFLVLGQIPLYGIVSSETSDPLYWLRAMLASNRGTLMELGVSPIITSSMIFQFLQGTQLLQVNMENKQDRELYQIAQKVFAILLTFGQAIVVVLTGNYGKPSDLGLAISLLLIFQLIFASFTVLLLDELLSKGYGLGSGISLFTATNIAEQITWKAFAPTTVNVGRGQEFEGAVIALFHLLAIRKDKKRALVEAFY 236
BLAST of FC878404 vs. ExPASy Swiss-Prot
Match: SC61A_SCHPO (Protein transport protein sec61 subunit alpha OS=Schizosaccharomyces pombe GN=sec61 PE=2 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 5.759e-77 Identity = 138/234 (58.97%), Postives = 180/234 (76.92%), Query Frame = 3 Query: 180 IKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPATVNTGRGTEFEGAVIALFHLLATRPDNVRALREAFY 878 ++FL+++KPF LPEIA PERK+ F++K+LWT +TL IFLV Q+PL+GI+SSDS+DP W+R+ILA+NRGTLMELGISPIVTS +++QLL G+++IEV + DR ++ QK ++I GQA YV+TGMYG P ++GAG+CLL+I+QL A LIVLLLDELLQKGYGLGSGISLFIAT CE I WKAFSP T + G +FEGAVI +++ T + AL +AF+ Sbjct: 4 LRFLDLVKPFAPFLPEIAAPERKVPFKQKMLWTGVTLLIFLVMSQVPLYGIVSSDSSDPLLWLRMILAANRGTLMELGISPIVTSSMLVQLLVGSQLIEVNMELKSDREMYQLVQKFLAIIIAFGQATAYVLTGMYGRPQDLGAGICLLLILQLAAASLIVLLLDELLQKGYGLGSGISLFIATINCENIFWKAFSPTTYHIANGVQFEGAVINFVYVMFTWDNKAAALYQAFF 237
BLAST of FC878404 vs. ExPASy Swiss-Prot
Match: SC61A_ASHGO (Protein transport protein SEC61 subunit alpha OS=Ashbya gossypii GN=SEC61 PE=3 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 5.759e-77 Identity = 142/236 (60.17%), Postives = 182/236 (77.12%), Query Frame = 3 Query: 174 MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPATVNTGRGTEFEGAVIALFHLLATRPDNVRALREAFY 878 M + L++ KPF + LPE+ PERK+ + +K++WTA++L IFLV QIPL+GI+SS+ +DP W+R +LASNRGTLMELG+SPI+TS +I Q L G ++++V ++ +DR LF AQK+ +V+T+GQAIV V+TG YG S +G + LL+I+QL A IVLLLDELL KGYGLGSGISLF ATNI E I WKAF+P TVN GRGTEFEGAV+ALFHLL+ R D RAL EAFY Sbjct: 1 MSGRLLDLFKPFEAFLPEVIAPERKVPYNQKLIWTAVSLLIFLVLGQIPLYGIVSSEGSDPLQWLRAMLASNRGTLMELGVSPIITSSMIFQFLQGTQLLQVNLESKQDRELFQIAQKVCAIVLTLGQAIVVVLTGNYGSVSNLGIAISLLLILQLVFASFIVLLLDELLIKGYGLGSGISLFTATNIAEQIFWKAFAPTTVNNGRGTEFEGAVVALFHLLSVRKDKKRALVEAFY 236
BLAST of FC878404 vs. ExPASy Swiss-Prot
Match: SECY_METTH (Preprotein translocase subunit secY OS=Methanobacterium thermoautotrophicum GN=secY PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 3.197e-35 Identity = 81/217 (37.33%), Postives = 133/217 (61.29%), Query Frame = 3 Query: 192 EVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPATVNTGRGTEFEGAVIALFHLLAT 839 E +P S+LP++ P ++ FREK+ WT I L ++ QIPL+G+ S+++ D F R +LA N G+++ LGI PIV++ +I+QLL G KI+++ +D+A F G QKL +V T +A+++V+TG PS ++I+QL + G++++ LDE++ K +G GSG+ LFIA + + I+ AF+P + T G G + +LL T Sbjct: 6 EKFEPLFSVLPQVKSPGYRVPFREKLKWTGIILVLYFFLAQIPLYGL-SANAVDQFAQFRAVLAGNFGSILTLGIGPIVSASIILQLLVGGKILKLDLSRHEDKAFFQGLQKLLAIVFTFFEALIFVLTGSLA-PS--APQFVWVLILQLTIGGILIIFLDEVVSK-WGFGSGVGLFIAAGVSQEIIVGAFNPLSAPTQPGVP-AGRITGFLYLLFT 216
BLAST of FC878404 vs. ExPASy Swiss-Prot
Match: SECY_PYRFU (Preprotein translocase subunit secY OS=Pyrococcus furiosus GN=secY PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.706e-34 Identity = 69/186 (37.10%), Postives = 127/186 (68.28%), Query Frame = 3 Query: 222 PEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPS-EIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPAT 773 PE+ +P+R++ RE+ +WT + L ++ V +IP++GI D F ++RV+LA G+++ LGI PIVT+G+I+QLL G++II++ P+DR + Q++F + + +A V+++ G +G ++ + +L+I+QL + G+++++LDEL+ K +G+GSGISLFIA + +TI+ ++ +P T Sbjct: 15 PEVERPKRRVPLRERFMWTGVALILYYVLAEIPVYGIPERIQ-DYFQFLRVVLAGRNGSILTLGIGPIVTAGIILQLLVGSEIIKLDLANPEDRRFYQALQRVFSVFMCFFEAAVWILGGAFGRVGVDVTYAIAVLMILQLAMGGIVLIILDELVSK-WGIGSGISLFIAAGVSQTILTRSLNPLT 198
BLAST of FC878404 vs. ExPASy Swiss-Prot
Match: SECY_SULAC (Preprotein translocase subunit secY OS=Sulfolobus acidocaldarius GN=secY PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.908e-33 Identity = 80/230 (34.78%), Postives = 136/230 (59.13%), Query Frame = 3 Query: 186 FLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDS-ADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKD-RALFNGAQKLFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPATVNTGRGTEFEGAVIALFHLLATRPDNVRALRE 869 F++ + LP ++KP+ K K+LWT I L ++L+ IPL+G+ SS+S F ++I AS++GTL +LGI P++TSGLIMQ+L G+K+I V T ++ ++ F A+K ++ + ++ ++ G + + +++++QL +A I+LLLDE++QKG+GLGSG+SLFI I + I W F +V + + + F LL + + R L+E Sbjct: 3 FMDFLAKMGENLPAVSKPKDKPTLTRKLLWTFIGLIVYLLMASIPLYGVTSSNSFLSNFLAQQIIFASSQGTLAQLGIGPVITSGLIMQILVGSKLINVDLTTQEGKSKFTQAEKALALIFIIVESSLF---GYVFTRATSNILLPIIVVVQLIIASYIILLLDEMIQKGWGLGSGVSLFIMAGIMKVIFWNMFGIVSVQS------QNLPVGFFPLLVSYITSGRNLQE 223
BLAST of FC878404 vs. ExPASy Swiss-Prot
Match: SECY_METVA (Preprotein translocase subunit secY OS=Methanococcus vannielii GN=secY PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.485e-32 Identity = 76/213 (35.68%), Postives = 131/213 (61.50%), Query Frame = 3 Query: 198 IKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETI----------VWKAFSPATVNTGRGTEFE 803 IKP ++PE+ +P + + F+EK+ WT + L ++ + I ++ + ++ F + + + AS GTL+ LGI PIVT+G+IMQLL G+++I + P +RALF G QKLFG+ + +A+++V G +G + + + L++++QL + ++V+ LDE++ + YG+GSGI LFIA + +TI +WK FS +V + G FE Sbjct: 3 IKPILELIPEVKRPLKGVSFKEKIQWTGLVLILYFILGTIDIY-MGGAEMPAMFAFWQTVTASKMGTLITLGIGPIVTAGIIMQLLVGSELISLDLSKPMNRALFQGLQKLFGIFLCFLEAVMFVGAGAFG---VVNSTLALILVLQLALGAILVIYLDEIVSR-YGIGSGIGLFIAAGVAQTIFVGAFGAEGYLWKFFSAMSVGS-LGIAFE 209
BLAST of FC878404 vs. ExPASy Swiss-Prot
Match: SECY_PYRAB (Preprotein translocase subunit secY OS=Pyrococcus abyssi GN=secY PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.308e-32 Identity = 68/186 (36.56%), Postives = 123/186 (66.13%), Query Frame = 3 Query: 222 PEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPS-EIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPAT 773 PE+ +P++ + +EK +WT + L ++ V +IP++GI D F ++RV+LA G+++ LGI PIVT+G+I+QLL G++II++ P+DR + Q++F + + +A ++V+ G +G ++ + L+I+QL G+I+++LDEL+ K +G+GSGISLFIA + + I+ ++ +P T Sbjct: 15 PEVERPKKHVPLKEKFMWTGLALILYYVLAEIPVYGIPERIQ-DYFQFLRVVLAGRNGSILTLGIGPIVTAGIILQLLVGSEIIKLDLANPEDRRFYQALQRVFSVFMCFLEAAIWVLGGAFGRVGVDVTYAIAALMILQLAFGGIILIVLDELVSK-WGIGSGISLFIAAGVSQRILTRSLNPLT 198 The following BLAST results are available for this feature:
BLAST of FC878404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878404 ID=FC878404; Name=FC878404; organism=Citrus clementina; type=EST; length=878bpback to top |