FC878404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878404 vs. ExPASy Swiss-Prot
Match: SECY_AERPE (Preprotein translocase subunit secY OS=Aeropyrum pernix GN=secY PE=3 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 3.308e-32 Identity = 76/199 (38.19%), Postives = 115/199 (57.79%), Query Frame = 3 Query: 174 MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLFGMVITVGQAIVYVMTGMY--GEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAF 761 MG+ ++V+ P + KPERK ++ WT + L ++ + IPL+GI + R+I AS+ GTLMELGI PIVT+ LI+Q+L GAKII++ P+ R F AQK+ + +A+ + + G Y G E G L+ +QLF+ L+V+ DE++QKG+G+GS ISLFI + + +VW F Sbjct: 1 MGV--IDVLAAVGERFPAVRKPERKPTLYRRLAWTGVILVLYFIMSNIPLYGIPPQNIGGQVDLQRIIFASSAGTLMELGIGPIVTASLIIQVLVGAKIIKLDLADPEGRRKFTSAQKVLALAFAALEAVAFTVGGRYWVGTAIEPGPLDYALVSLQLFLGALLVIYFDEVMQKGWGIGSAISLFILAGVAQGVVWSIF 197
BLAST of FC878404 vs. ExPASy Swiss-Prot
Match: SECY_PYRHO (Preprotein translocase subunit secY OS=Pyrococcus horikoshii GN=secY PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.321e-32 Identity = 68/186 (36.56%), Postives = 123/186 (66.13%), Query Frame = 3 Query: 222 PEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPS-EIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPAT 773 PE+ +P++ + +EK +WT + L ++ V +IP++GI D F ++RV+LA G+++ LGI PIVT+G+I+QLL G+++I + P+DR + Q++F + + +A ++V+ G +G ++ + L+IIQL + G+I+++LDEL+ K +G+GSGISLFIA + + I+ ++ +P T Sbjct: 15 PEVERPKKHVPLKEKFVWTGLALVLYYVLAEIPVYGIPKKIQ-DYFQFLRVVLAGRNGSILTLGIGPIVTAGIILQLLVGSELIRLDLANPEDRRFYQALQRVFSVFMCFFEAAIWVLGGAFGRVGVDVTYTIATLMIIQLALGGIILIVLDELVSK-WGIGSGISLFIAAGVSQRILTRSLNPLT 198
BLAST of FC878404 vs. ExPASy Swiss-Prot
Match: SECY_SULSO (Preprotein translocase subunit secY OS=Sulfolobus solfataricus GN=secY PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.643e-32 Identity = 80/227 (35.24%), Postives = 129/227 (56.83%), Query Frame = 3 Query: 180 IKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPSEIGAGVCL---LIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPATVNTGRGTEFEGAVIALFHLLATRPD 848 + F++ + LP + KP+ K +K++W+ + + I+L+ PL+GI S+ ++I AS GTL +LGI PI+T+GLIMQ+LAG+K+I + + P DR F AQK + + ++ ++ + + I A + ++I QL VA ++LLLDEL+QKG+GLGSG+SLFI + + + W F A+V++ G ALF LA+ D Sbjct: 1 MSFIDSLATLGQYLPAVTKPKEKPSLGQKLVWSLVAVIIYLIMASTPLYGITSASFFKNLILEQIIFASTTGTLAQLGIGPIITAGLIMQILAGSKLISIDLNDPDDRVKFTEAQKGLAFIFILVESALFGYV-LARTSTTINASILFIAGIVIAQLIVATYLILLLDELIQKGWGLGSGVSLFILAGVMKIMFWDMFGIASVSSQNLP--IGFFPALFTALASHSD 224
BLAST of FC878404 vs. ExPASy Swiss-Prot
Match: YGMH_SCHPO (Uncharacterized protein C19G7.17 OS=Schizosaccharomyces pombe GN=SPBC19G7.17 PE=2 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 1.257e-31 Identity = 75/237 (31.65%), Postives = 134/237 (56.54%), Query Frame = 3 Query: 177 GIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFS--PATVNTGRGTEFEGAVIALFHLLATRPDNVRALREAFY 878 G +F+ IKP S+LPE+ P+ ++ EK+ W A + ++ + IP++G +D+ DP RV+ S+ LM G++PI S ++Q+LA K I V + DR LF AQK+ ++ + A+ YV +G YG S++G +++I+Q+F+ G++ + L E+++KG+GLGSG L + ++I I+W S VN ++++GA++ L + + +LR + Sbjct: 3 GARFINFIKPLSSLLPEVEGPKTHLELVEKLGWMAGCVVVYQILSIIPVYGAEKTDTLDPINNFRVLDGSSASGLMITGLAPIYLSSFLLQILASKKKIAVNFNLIIDRVLFQNAQKVVSALLYLILAVTYVSSGYYGSFSDLGIFRFIMLILQIFLPGIVCIYLCEIIEKGHGLGSGPVLLLGSHILGNIMWDVLSLHRYPVNESGDSQYQGALVGFAFNLFSFKNKFSSLRSILF 239
BLAST of FC878404 vs. ExPASy Swiss-Prot
Match: SECY_METJA (Preprotein translocase subunit secY OS=Methanocaldococcus jannaschii GN=secY PE=1 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 4.471e-29 Identity = 73/189 (38.62%), Postives = 116/189 (61.38%), Query Frame = 3 Query: 204 PFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSP 767 P +PE+ P ++I F+EK+ WT I L ++ + I ++ + A +W + I AS GTL+ LGI PIVT+G+IMQLL G+ II++ P++RALF G QKL +++ +A+++V G +G + + + L+IIQ+ +I++ LDE++ K YG+GSGI LFIA + +TI A P Sbjct: 6 PILEKIPEVELPVKEITFKEKLKWTGIVLVLYFIMGCIDVYTAGAQIPAIFEFW-QTITASRIGTLITLGIGPIVTAGIIMQLLVGSGIIQMDLSIPENRALFQGCQKLLSIIMCFVEAVLFVGAGAFGILTPL---LAFLVIIQIAFGSIILIYLDEIVSK-YGIGSGIGLFIAAGVSQTIFVGALGP 189
BLAST of FC878404 vs. ExPASy Swiss-Prot
Match: SECY_ARCFU (Preprotein translocase subunit secY OS=Archaeoglobus fulgidus GN=secY PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.219e-28 Identity = 69/200 (34.50%), Postives = 118/200 (59.00%), Query Frame = 3 Query: 189 LEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDT-PKDRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPSEIGAG-------VCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFS 764 + ++P+ +P + +P+ + FREK WTA L ++ + +P+FG+ S +S D F R + A + G+++ LGI PIVT+ +I+QLL GA II++ T P+DRA + Q+ V+ +AI + G+ + A + LI IQLF+ G++++ +DE++ K +G+GSG+SLFI I ++IV F+ Sbjct: 5 IRALQPYFERIPSVERPKGHVHFREKFGWTAAILLLYFILSNVPVFGL-SPESIDIFAAYRALFAGSTGSIIALGIGPIVTASIILQLLVGAGIIKLDLTNPEDRAAYQDFQRFLVFVMIAVEAIPQIAGGLLKPDLNLAAQLGVSPGIISFLIFIQLFIGGVLIVYMDEVVSK-WGIGSGVSLFILAGIAQSIVVGLFN 202
BLAST of FC878404 vs. ExPASy Swiss-Prot
Match: SSH1_YEAST (Sec sixty-one protein homolog OS=Saccharomyces cerevisiae GN=SSH1 PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.590e-26 Identity = 74/228 (32.46%), Postives = 120/228 (52.63%), Query Frame = 3 Query: 177 GIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSA---DPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPATVNTGRG--TEFEGAVIALFHLLATR 842 G + ++++KP ILPE+ P K+ F +K+++T I+L Q PL G+ + + DP Y++R + TL+E G+ P ++SGLI+QLLAG K+I+V DR LF K+F +V V +++ G +G+ ++ LI QL AG+ LL E++ KG+G SG + I +V F + + G TE +GA+I L L ++ Sbjct: 3 GFRLIDIVKPILPILPEVELPFEKLPFDDKIVYTIFAGLIYLFA-QFPLVGLPKATTPNVNDPIYFLRGVFGCEPRTLLEFGLFPNISSGLILQLLAGLKVIKVNFKIQSDRELFQSLTKVFAIVQYVILTNIFIFAGYFGD--DLSVVQIGLINFQLVGAGIFTTLLAEVIDKGFGFSSGAMIINTVVIATNLVADTFGVSQIKVGEDDQTEAQGALINLIQGLRSK 227
BLAST of FC878404 vs. ExPASy Swiss-Prot
Match: SECY_HALSA (Preprotein translocase subunit secY OS=Halobacterium salinarium GN=secY PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.543e-26 Identity = 66/196 (33.67%), Postives = 114/196 (58.16%), Query Frame = 3 Query: 192 EVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKI--IEVGDTPKDRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPSEIGA--------GVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIV 749 E P + +P + +PE + FR K+ WT L ++ +PL+GI ++ + D F R +LA +GT+++LGI PIVT+ +++QLL GA + ++ + P+D+A++ G QK V+ V V G + +PS+ A GV +LI Q+ G+++L +DE++ K +G+GSGI LFI + +++V Sbjct: 5 EAAAPVLTRMPAVERPEGHVPFRRKMYWTGGVLVLYFFLTNVPLWGIQTAGN-DFFGQFRSLLAGGQGTVLQLGIGPIVTASIVLQLLGGANLLGLDTDNDPRDQAIYQGLQKFLVGVMVVLTGAPMVFLGNFLQPSQQLAQSMPGGAFGVEVLIFAQIAAGGILLLFMDEVISK-WGVGSGIGLFIVAGVSQSLV 198
BLAST of FC878404 vs. ExPASy Swiss-Prot
Match: SECY_HALMA (Preprotein translocase subunit secY OS=Haloarcula marismortui GN=secY PE=3 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 1.031e-25 Identity = 66/196 (33.67%), Postives = 110/196 (56.12%), Query Frame = 3 Query: 192 EVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG--DTPKDRALFNGAQKLFGMVITVGQAIVYVMTGMY-----GEPSEIG---AGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIV 749 + +P +P + +PE + F+ K+ WT L ++ + LFG+ S F ILAS +G++M+LGI PIVT+ +++QLL GA ++ + D P+D+ L+ G QKL +V+ + V G + + +G AGV LI Q+FV G+++L +DE++ K +G+GSGI LFI + + +V Sbjct: 5 DTAEPLLVRMPAVQRPEGHVPFKRKLTWTGGVLLLYFFLTNVKLFGLDIDASQQVFGRFSSILASGQGSIMQLGIGPIVTASIVLQLLGGADLLGLNTQDDPRDQILYQGLQKLLVLVMICLTGLPMVFAGGFLPADTAVANSLGIGTAGVQWLIFAQMFVGGVLILFMDEVISK-WGVGSGIGLFIVAGVSQRLV 199
BLAST of FC878404 vs. ExPASy Swiss-Prot
Match: SECY_HALVO (Preprotein translocase subunit secY OS=Halobacterium volcanii GN=secY PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.758e-25 Identity = 66/201 (32.84%), Postives = 113/201 (56.22%), Query Frame = 3 Query: 192 EVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKI--IEVGDTPKDRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPSEIGA--------GVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFS 764 + +P S +P +A+PE + FR K+ WT L ++ + LFG+ ++ + D F R ILA +G++++LGI PIVT+ +++QLL GA + ++ + P+D+ L+ G QKL V+ + V G + + A GV LI Q+ V G+++L +DE++ K +G+GSG+ LFI + + +V FS Sbjct: 5 DAAEPVLSRMPAVARPEGHVPFRRKLGWTGGILVLYFFLTNVTLFGLDAATANDLFGQFRSILAGQQGSVLQLGIGPIVTASIVLQLLGGADLLGLDTDNNPRDQVLYQGLQKLLVGVMICLTGLPMVFAGNFLPADQAVATSLGIGTVGVKGLIFAQIAVGGVLILFMDEIVSK-WGVGSGVGLFIIAGVSQQLVGGLFS 204 The following BLAST results are available for this feature:
BLAST of FC878404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878404 ID=FC878404; Name=FC878404; organism=Citrus clementina; type=EST; length=878bpback to top |