FC878411
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878411 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.602e-28 Identity = 66/180 (36.67%), Postives = 93/180 (51.67%), Query Frame = 1 Query: 10 AKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 549 A KR++++ K LQ+DPP S P ++ W A I G P D+P+ GG F +T+ F DYP KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P E A ++ +K +Y E ++WT Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMG----------------------------------PSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKY-----ESTARTWT 142
BLAST of FC878411 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.733e-28 Identity = 65/180 (36.11%), Postives = 93/180 (51.67%), Query Frame = 1 Query: 10 AKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 549 A KR++++ K LQ+DPP S P ++ W A I G P D+P+ GG F +T+ F DYP KPP V F +++FHPN+ ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P E A ++ ++ +Y E +SWT Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMG----------------------------------PSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ESTARSWT 142
BLAST of FC878411 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.570e-28 Identity = 66/180 (36.67%), Postives = 93/180 (51.67%), Query Frame = 1 Query: 10 AKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 549 A KR++++ K LQ+DPP S P ++ W A I G P ++P+ GG F +T+ F DYP KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P E A ++ +K +Y E +SWT Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMG----------------------------------PSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKY-----ESTARSWT 142
BLAST of FC878411 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.039e-27 Identity = 65/180 (36.11%), Postives = 93/180 (51.67%), Query Frame = 1 Query: 10 AKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 549 A KR++++ K LQ+DPP S P ++ W A I G P D+P+ GG F +++ F DYP KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P E A ++ ++ +Y E +SWT Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMG----------------------------------PTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSWT 142
BLAST of FC878411 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.357e-27 Identity = 63/180 (35.00%), Postives = 95/180 (52.78%), Query Frame = 1 Query: 10 AKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 549 A +R++++ K LQ+DPP S P ++ W A I G P+++P+ GG F + + F DYP KPP V F +++FHPNI ++G+ICLDIL++QWSP ++ +L SI SLL DPNP+ P E A ++ +K +Y E + +SWT Sbjct: 2 ATRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMG----------------------------------PNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKTDKTKY-----EAMARSWT 142
BLAST of FC878411 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.772e-27 Identity = 64/180 (35.56%), Postives = 93/180 (51.67%), Query Frame = 1 Query: 10 AKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 549 A KR++++ K LQ+DPP S P ++ W A I G P ++P+ GG F +T+ F DYP KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P E A ++ ++ +Y E ++WT Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMG----------------------------------PAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----EATARNWT 142
BLAST of FC878411 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.772e-27 Identity = 66/180 (36.67%), Postives = 93/180 (51.67%), Query Frame = 1 Query: 10 AKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 549 A KR+ ++ + LQ+DPP S P +++ W A I G P D+P+ GG F +T+ F DYP KPP V F ++++HPNI ++GSICLDIL+ QWSP V+ +L SI SLL DPNP+ P E A ++ ++ +Y E QSWT Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMG----------------------------------PADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDRVKY-----ESTAQSWT 142
BLAST of FC878411 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 5.155e-27 Identity = 63/180 (35.00%), Postives = 94/180 (52.22%), Query Frame = 1 Query: 10 AKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 549 A KR++++ K LQ+DPP+ S P ++ W A I G P ++P+ GG F +++ F DYP KPP V F ++++HPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P E A ++ ++ +Y E +SWT Sbjct: 2 ASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMG----------------------------------PPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKY-----ESTARSWT 142
BLAST of FC878411 vs. ExPASy Swiss-Prot
Match: UBC12_ARATH (Probable ubiquitin-conjugating enzyme E2 12 OS=Arabidopsis thaliana GN=UBC12 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.733e-27 Identity = 67/181 (37.02%), Postives = 91/181 (50.28%), Query Frame = 1 Query: 10 AKKRLMRDFKRLQQDPPAGISGAP-QDNNIMLWNAVIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 549 A KR+ R+ + +Q+ PPA S P + +I W A I G P D+P+ GG F +++ F+ DYP KPP V F ++++HPNI + GSICLDIL+ QWSP + +L SI SLL DPNPN P E A L+ +K +Y E Q WT Sbjct: 2 ASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMG----------------------------------PHDSPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDILKEQWSPAPTTSKVLLSICSLLTDPNPNDPLVPEIAHLYKVDKSKY-----ESTAQKWT 143
BLAST of FC878411 vs. ExPASy Swiss-Prot
Match: UBC4_SCHPO (Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe GN=ubc4 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.148e-26 Identity = 63/173 (36.42%), Postives = 89/173 (51.45%), Query Frame = 1 Query: 10 AKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVRE 528 A KR+ R+ L +DPP+ S P +++ W A I G P D+P+ GG F L++ F DYP KPP V F +R++HPNI ++GSICLDIL++QWSP ++ +L SI SLL DPNP+ P E A ++ ++ Y RE Sbjct: 2 ALKRINRELADLGKDPPSSCSAGPVGDDLFHWQATIMG----------------------------------PADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHVYKTDRSRYELSARE 140 The following BLAST results are available for this feature:
BLAST of FC878411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 226
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878411 ID=FC878411; Name=FC878411; organism=Citrus clementina; type=EST; length=846bpback to top |