FC878411
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878411 vs. ExPASy Swiss-Prot
Match: UBC1_COLGL (Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletotrichum gloeosporioides GN=UBC1 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.341e-26 Identity = 61/173 (35.26%), Postives = 87/173 (50.29%), Query Frame = 1 Query: 10 AKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVRE 528 A KR+ ++ L +DPP+ S P ++ W A I G P D+P+ GG F L + F DYP KPP V F +R++HPNI ++GSICLDIL++QWSP ++ +L SI S+L DPNP+ P E A ++ ++ Y RE Sbjct: 2 AFKRINKELTDLGRDPPSSCSAGPVGEDLFHWQATIMG----------------------------------PGDSPYSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDEPLVPEIAHVYKTDRARYEATARE 140
BLAST of FC878411 vs. ExPASy Swiss-Prot
Match: UBC1_MAGGR (Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnaporthe grisea GN=UBC1 PE=3 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 4.364e-26 Identity = 61/173 (35.26%), Postives = 87/173 (50.29%), Query Frame = 1 Query: 10 AKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVRE 528 A KR+ ++ L +DPP+ S P ++ W A I G P D+P+ GG F L + F DYP KPP V F +R++HPNI ++GSICLDIL++QWSP ++ +L SI S+L DPNP+ P E A ++ + +Y RE Sbjct: 2 ALKRINKELTDLGRDPPSSCSAGPVGEDLFHWQATIMG----------------------------------PSDSPYAGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVYKTARAQYESTARE 140
BLAST of FC878411 vs. ExPASy Swiss-Prot
Match: UBE2N_DROME (Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.658e-25 Identity = 59/171 (34.50%), Postives = 92/171 (53.80%), Query Frame = 1 Query: 16 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVRE 528 +R++++ +RL Q+P GI+ P +NN ++ ++ G P+D+P++GG FKL L EDYP P VRF+++++HPNI G ICLD+L+++WSP + IL SIQ+LL PNP+ P ++ A L+ N+ E R RE Sbjct: 6 RRIIKETQRLMQEPVPGINAIPDENNARYFHVIVTG----------------------------------PNDSPFEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDVLKDKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNARE 142
BLAST of FC878411 vs. ExPASy Swiss-Prot
Match: UBC5_YEAST (Ubiquitin-conjugating enzyme E2-16 kDa OS=Saccharomyces cerevisiae GN=UBC5 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.694e-25 Identity = 59/173 (34.10%), Postives = 89/173 (51.45%), Query Frame = 1 Query: 10 AKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVRE 528 + KR+ ++ L +DPPA S P +++ W A I G P D+P+ GG F L++ F DYP KPP V F ++++HPNI + G+ICLDIL++QWSP ++ +L SI SLL D NP+ P E A+++ +K +Y +E Sbjct: 3 SSKRIAKELSDLGRDPPASCSAGPVGDDLYHWQASIMG----------------------------------PSDSPYAGGVFFLSIHFPTDYPFKPPKVNFTTKIYHPNINSSGNICLDILKDQWSPALTLSKVLLSICSLLTDANPDDPLVPEIAQIYKTDKAKYEATAKE 141
BLAST of FC878411 vs. ExPASy Swiss-Prot
Match: UBC4_YEAST (Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces cerevisiae GN=UBC4 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 6.302e-25 Identity = 58/173 (33.53%), Postives = 89/173 (51.45%), Query Frame = 1 Query: 10 AKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVRE 528 + KR+ ++ L++DPP S P +++ W A I G P D+P+ GG F L++ F DYP KPP + F ++++HPNI A+G+ICLDIL++QWSP ++ +L SI SLL D NP+ P E A ++ ++ +Y RE Sbjct: 3 SSKRIAKELSDLERDPPTSCSAGPVGDDLYHWQASIMG----------------------------------PADSPYAGGVFFLSIHFPTDYPFKPPKISFTTKIYHPNINANGNICLDILKDQWSPALTLSKVLLSICSLLTDANPDDPLVPEIAHIYKTDRPKYEATARE 141
BLAST of FC878411 vs. ExPASy Swiss-Prot
Match: UBC20_ARATH (Ubiquitin carrier protein E2 20 OS=Arabidopsis thaliana GN=UBC20 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 8.230e-25 Identity = 65/172 (37.79%), Postives = 91/172 (52.91%), Query Frame = 1 Query: 16 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREI 531 KRL + L GIS P+++NI W I G DT ++G ++L+L F+ DYP KPP V+F + FHPN+ G+ICLDILQ++WS YDV IL SIQSLL +PN +SP N++AA+L+S N+ EY + V ++ Sbjct: 38 KRLQSELMGLMMGGGPGISAFPEEDNIFCWKGTITG----------------------------------SKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWS-NQEEYRKMVEKL 174
BLAST of FC878411 vs. ExPASy Swiss-Prot
Match: UBE2C_DICDI (Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum GN=ube2c PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.075e-24 Identity = 65/167 (38.92%), Postives = 89/167 (53.29%), Query Frame = 1 Query: 16 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNR 516 KRL + L P GIS P +NI W I G DT ++ FK++L+F DYP KPPTV+F ++ FHPN+ +G+ICLDIL+++WSP+Y+V ++L SIQSLL +PN SP NS AA L+S N+ EY + Sbjct: 9 KRLQSELMNLMMGPSPGISAFPDGDNIFNWIGTIQG----------------------------------AKDTVYEQMEFKMSLKFPTDYPYKPPTVKFETQCFHPNVDNNGNICLDILKDKWSPVYNVRSLLISIQSLLGEPNNESPLNSYAASLWS-NQDEYKK 140
BLAST of FC878411 vs. ExPASy Swiss-Prot
Match: UBC7_SCHPO (Ubiquitin-conjugating enzyme E2-18 kDa OS=Schizosaccharomyces pombe GN=ubc3 PE=2 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 2.395e-24 Identity = 60/192 (31.25%), Postives = 96/192 (50.00%), Query Frame = 1 Query: 10 AKKRLMRDFKRLQQDPPAGISGAPQ-DNNIMLWNAVIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQS 543 A +RLM+++K L ++ P GI+ P +++ W+ +I G PD TP++GG + TL+F DYP PPT++F FHPN+Y DG++C+ IL +WSP+ V IL S+ S+L +PN S AN +A +++ E++ EY R VR + ++ Sbjct: 6 ALRRLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQG----------------------------------PDGTPFEGGLYPATLKFPSDYPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKILLSVMSMLAEPNDESGANIDACKMWREDREEYCRVVRRLARKT 163
BLAST of FC878411 vs. ExPASy Swiss-Prot
Match: UBC4_CANAL (Ubiquitin-conjugating enzyme E2 4 OS=Candida albicans GN=UBC4 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.085e-24 Identity = 55/171 (32.16%), Postives = 89/171 (52.05%), Query Frame = 1 Query: 16 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVRE 528 KR+ ++ L +DPP+ S P +++ W A I G P D+P+ GG F L++ F DYP KPP + ++++HPNI ++G+ICLDIL++QWSP ++ +L SI SLL D NP+ P E A ++ +++++Y +E Sbjct: 4 KRINKELSDLGRDPPSSCSAGPVGDDLYHWQASIMG----------------------------------PPDSPYAGGVFFLSIHFPTDYPLKPPKIALTTKIYHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAHIYKQDRKKYEATAKE 140
BLAST of FC878411 vs. ExPASy Swiss-Prot
Match: UBC19_ARATH (Ubiquitin carrier protein E2 19 OS=Arabidopsis thaliana GN=UBC19 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.967e-24 Identity = 64/172 (37.21%), Postives = 90/172 (52.33%), Query Frame = 1 Query: 16 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREI 531 KRL + L GIS P+++NI W I G DT ++G ++L+L F+ DYP K P V+F + FHPN+ G+ICLDILQ++WS YDV IL SIQSLL +PN +SP N++AA+L+S N+ EY + V ++ Sbjct: 39 KRLQSELMGLMMGADPGISAFPEEDNIFCWKGTITG----------------------------------SKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLWS-NQEEYRKMVEKL 175 The following BLAST results are available for this feature:
BLAST of FC878411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 226
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878411 ID=FC878411; Name=FC878411; organism=Citrus clementina; type=EST; length=846bpback to top |