FC878411
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878411 vs. ExPASy Swiss-Prot
Match: UBC15_SCHPO (Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccharomyces pombe GN=ubc15 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.188e-23 Identity = 60/195 (30.77%), Postives = 96/195 (49.23%), Query Frame = 1 Query: 1 STPAKKRLMRDFKRLQQDPPAGIS-GAPQDNNIMLWNAVIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQS 543 S+ +++ L + K +Q++PP G S G D +I W +I G P+DT ++GG F TL F +DYP PP ++F + ++HPN++ +G +C+ IL +W P++ IL S+ S+L PN SPAN +AA+ F EN +E+ +RVR +V +S Sbjct: 3 SSASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIG----------------------------------PEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILISVISMLSSPNDESPANIDAAKEFRENPQEFKKRVRRLVRRS 163
BLAST of FC878411 vs. ExPASy Swiss-Prot
Match: UBC11_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC11 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.027e-23 Identity = 49/105 (46.67%), Postives = 73/105 (69.52%), Query Frame = 1 Query: 226 PDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQ 540 P DTP+ G FK++L+F ++YP PP ++F+S M+HPN+ G+ICLDIL+ +WS +Y+V IL S+QSLL +PN SP N+ AA L+ + EY ++V E+ Sbjct: 48 PKDTPYSGLKFKVSLKFPQNYPFHPPMIKFLSPMWHPNVDKSGNICLDILKEKWSAVYNVETILLSLQSLLGEPNNRSPLNAVAAELWDADMEEYRKKVLACYEE 152
BLAST of FC878411 vs. ExPASy Swiss-Prot
Match: UBC11_SCHPO (Ubiquitin-conjugating enzyme E2-20 kDa OS=Schizosaccharomyces pombe GN=ubc11 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.458e-23 Identity = 65/179 (36.31%), Postives = 92/179 (51.40%), Query Frame = 1 Query: 16 KRLMRDFKRLQQDPPAGISGAPQ-DNNIMLWNAVIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNR----RVREIVE 537 KRL + L GIS P D+N++ W I G P DT ++G FK+++ F +YP PPT+ F S M+HPN+ G+ICLDIL+++WS +Y+V IL S+QSLL +PN SP N++AA L+S++ EY R R +EI E Sbjct: 31 KRLRSELMSLMMSNTPGISAFPDSDSNLLHWAGTITG----------------------------------PSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDILKDKWSAVYNVQTILLSLQSLLGEPNNASPLNAQAAELWSKDPIEYKRLLMQRYKEIDE 175
BLAST of FC878411 vs. ExPASy Swiss-Prot
Match: UBE2N_DICDI (Probable ubiquitin-conjugating enzyme E2 N OS=Dictyostelium discoideum GN=ube2n PE=3 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 4.516e-23 Identity = 58/171 (33.92%), Postives = 87/171 (50.88%), Query Frame = 1 Query: 16 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVRE 528 KR++++ +RL +P GIS P +N + I G P D+P++GG F L L T+DYP P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PNP+ P ++ A + N++E R RE Sbjct: 6 KRIIKETQRLMTEPAPGISATPATDNFRYFKVAISG----------------------------------PLDSPFEGGVFNLELFLTDDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEHWKTNEKEAMARARE 142
BLAST of FC878411 vs. ExPASy Swiss-Prot
Match: UB2G2_PONAB (Ubiquitin-conjugating enzyme E2 G2 OS=Pongo abelii GN=UBE2G2 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.898e-23 Identity = 61/192 (31.77%), Postives = 93/192 (48.44%), Query Frame = 1 Query: 10 AKKRLMRDFKRLQQDPPAGISGAPQ-DNNIMLWNAVIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQS 543 A KRLM ++K+L +PP GI P + N W A+I G P+DT ++ G F L F DYP PP +RF MFHPNIY DG +C+ IL +WSP+ V IL S+ S+L +PN S AN +A++++ +++ ++ + ++IV++S Sbjct: 5 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMG----------------------------------PEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKS 162
BLAST of FC878411 vs. ExPASy Swiss-Prot
Match: UB2G2_MOUSE (Ubiquitin-conjugating enzyme E2 G2 OS=Mus musculus GN=Ube2g2 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.898e-23 Identity = 61/192 (31.77%), Postives = 93/192 (48.44%), Query Frame = 1 Query: 10 AKKRLMRDFKRLQQDPPAGISGAPQ-DNNIMLWNAVIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQS 543 A KRLM ++K+L +PP GI P + N W A+I G P+DT ++ G F L F DYP PP +RF MFHPNIY DG +C+ IL +WSP+ V IL S+ S+L +PN S AN +A++++ +++ ++ + ++IV++S Sbjct: 5 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMG----------------------------------PEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKS 162
BLAST of FC878411 vs. ExPASy Swiss-Prot
Match: UB2G2_HUMAN (Ubiquitin-conjugating enzyme E2 G2 OS=Homo sapiens GN=UBE2G2 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.898e-23 Identity = 61/192 (31.77%), Postives = 93/192 (48.44%), Query Frame = 1 Query: 10 AKKRLMRDFKRLQQDPPAGISGAPQ-DNNIMLWNAVIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQS 543 A KRLM ++K+L +PP GI P + N W A+I G P+DT ++ G F L F DYP PP +RF MFHPNIY DG +C+ IL +WSP+ V IL S+ S+L +PN S AN +A++++ +++ ++ + ++IV++S Sbjct: 5 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMG----------------------------------PEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKS 162
BLAST of FC878411 vs. ExPASy Swiss-Prot
Match: UB2G2_BOVIN (Ubiquitin-conjugating enzyme E2 G2 OS=Bos taurus GN=UBE2G2 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.898e-23 Identity = 61/192 (31.77%), Postives = 93/192 (48.44%), Query Frame = 1 Query: 10 AKKRLMRDFKRLQQDPPAGISGAPQ-DNNIMLWNAVIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQS 543 A KRLM ++K+L +PP GI P + N W A+I G P+DT ++ G F L F DYP PP +RF MFHPNIY DG +C+ IL +WSP+ V IL S+ S+L +PN S AN +A++++ +++ ++ + ++IV++S Sbjct: 5 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMG----------------------------------PEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKVAKQIVQKS 162
BLAST of FC878411 vs. ExPASy Swiss-Prot
Match: UBC7_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC7 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.314e-22 Identity = 60/189 (31.75%), Postives = 93/189 (49.21%), Query Frame = 1 Query: 1 STPAKKRLMRDFKRLQQDPPAGISGAPQ-DNNIMLWNAVIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVR 525 S A+KRL+++ ++L +D P GI P+ +NNI +W+ +I G P DTP+ G F L+F +DYP PP + F + HPNIY +G +C+ IL + +WSP+ V IL S+ S+L +PN S AN +A L+ +N+ E+ R+V+ Sbjct: 2 SKTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQG----------------------------------PPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQVK 156
BLAST of FC878411 vs. ExPASy Swiss-Prot
Match: UBE2C_SPISO (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.716e-22 Identity = 60/171 (35.09%), Postives = 87/171 (50.88%), Query Frame = 1 Query: 16 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVRE 528 KRL ++ + L GI+ P +N+ W A + G P DT ++ +KLTL+F DYP KPP V+F + +HPN+ G+ICLDIL+ W+ YDV IL S+QSLL +PN SP N++AA ++S N+ EY + + E Sbjct: 33 KRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDG----------------------------------PKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMWS-NQTEYKKVLHE 168 The following BLAST results are available for this feature:
BLAST of FC878411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 226
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878411 ID=FC878411; Name=FC878411; organism=Citrus clementina; type=EST; length=846bpback to top |