FC878413
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: CP17A_FELCA (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Felis catus GN=CYP17A1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.027e-11 Identity = 41/153 (26.80%), Postives = 73/153 (47.71%), Query Frame = 2 Query: 155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICV-TELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRF 610 ++G L + PHK+F KL +K GPI+ +LG V+V +LAK+VL + F+ RP +++ +S + F+ +G W+ RK+ + T L + ++ E++ + + G D+ +F T+ CL F F Sbjct: 36 LVGSLLFLPRSGHPHKNFFKLQKKYGPIYSFRLGTKTTVMVGDHQLAKEVLVKKGKEFSGRPHVVTLDILSDNQKGIAFADHGASWQMHRKLALATFALFKDGDQRLEKIICREISLLCDNLAMQDGQSIDLYLPLFLAVTNIICLICFNSSF 188
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: CP17A_MOUSE (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mus musculus GN=Cyp17a1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.457e-11 Identity = 42/157 (26.75%), Postives = 75/157 (47.77%), Query Frame = 2 Query: 155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDED 625 ++G L + H +F KL EK GPI+ ++LG AV+V +LA++VL + F+ RP +++ +S V F+ + W+ RK+ + + + ++ +E N + G D+S LIF + C F + F E++D Sbjct: 36 LVGSLPFLPRRGHMHANFFKLQEKYGPIYSLRLGTTTAVIVGHYQLAREVLVKKGKEFSGRPQMVTLGLLSDQGKGVAFADSSSSWQLHRKLVFSTFSLFRDDQKLEKMICQEANSLCDLILTYDGESRDLSTLIFKSVINIICTICFNISF-ENKD 191
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: CP17A_MESAU (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mesocricetus auratus GN=CYP17A1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.457e-11 Identity = 51/216 (23.61%), Postives = 102/216 (47.22%), Query Frame = 2 Query: 155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVN-SFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEI 799 ++G L + PH +F KL EK GPI+ ++LG V++ +LAK+VL + F+ RP +++ +S + F+ +G W+ RK+ ++ + N + ++ ++ + + D+S+ IF T+ C+ FG+ + E+ D LA++ E +L G+ ++P WLT + + + + + DE+ Sbjct: 36 LVGSLPFIPRHGHPHVNFFKLQEKYGPIYSLRLGSTTTVIIGQYQLAKEVLVKKGKEFSGRPHMVTLGLLSDQGKGIAFADSGGSWQLHRKLALSSFALFRDGNQKLEKIICQKASSLCDFLLTHNEESIDLSEPIFNSITNIICIICFGISY-ENRD-----PILATIKSFTEGILNSL--GNDHLVDIFP-WLTIFPNKTVDMIKKNVKIRDEV 242
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: CP17A_BOVIN (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Bos taurus GN=CYP17A1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.897e-11 Identity = 41/163 (25.15%), Postives = 79/163 (48.47%), Query Frame = 2 Query: 155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVN-SFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKS 640 ++G L + + HK+F KL EK GPI+ +LG V++ +LA++VL + F+ RP + + +S + F+ +G +W+ RK+ + K N + ++++E N + + G D+S+ + T+ F F ++ED K+ Sbjct: 36 LVGSLPFLPRRGQQHKNFFKLQEKYGPIYSFRLGSKTTVMIGHHQLAREVLLKKGKEFSGRPKVATLDILSDNQKGIAFADHGAHWQLHRKLALNAFALFKDGNLKLEKIINQEANVLCDFLATQHGEAIDLSEPLSLAVTNIISFICFNFSF-KNEDPALKA 197
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: CP17A_BISBI (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Bison bison GN=CYP17A1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.897e-11 Identity = 41/163 (25.15%), Postives = 79/163 (48.47%), Query Frame = 2 Query: 155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVN-SFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKS 640 ++G L + + HK+F KL EK GPI+ +LG V++ +LA++VL + F+ RP + + +S + F+ +G +W+ RK+ + K N + ++++E N + + G D+S+ + T+ F F ++ED K+ Sbjct: 36 LVGSLPFLPRRGQQHKNFFKLQEKYGPIYSFRLGSKTTVMIGHHQLAREVLLKKGKEFSGRPKVATLDILSDNQKGIAFADHGAHWQLHRKLALNAFALFKDGNLKLEKIINQEANVLCDFLATQHGEAIDLSEPLSLAVTNIISFICFNFSF-KNEDPALKA 197 The following BLAST results are available for this feature:
BLAST of FC878413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 115
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878413 ID=FC878413; Name=FC878413; organism=Citrus clementina; type=EST; length=918bpback to top |