FC878413

Overview
NameFC878413
Unique NameFC878413
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length918
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71A3_SOLME (Cytochrome P450 71A3 (Fragment) OS=Solanum melongena GN=CYP71A3 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.665e-27
Identity = 78/254 (30.71%), Postives = 129/254 (50.79%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFC---TDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVKKSDD 907
            IIG+LH       PH+S  KL++K GP+  + LG  P +V SS E  + ++KT+D V+++RP    A  +  G  DV+FSP+G YWRQ R I V  LLS KRV S++   +EE +  + ++K      +  +DL   FC    +     A G ++ ++ D    +K     F+   ELL  F  GD+     W   +TG+  +V K +++L   ++ + +    R +     A     ++D +DVL  ++   +
Sbjct:   34 IIGNLHQLGLH--PHRSLHKLSKKYGPVMLLHLGSKPVIVASSVEAVRDIMKTNDLVWSNRPKSKMADRLIYGSKDVSFSPHGEYWRQIRSITVLHLLSNKRVQSYRAAREEETSNMIEKLKQMSNSSSSATDLRDLFCWLAYNIINRVALGKKYNDEID----AKATLDKFV---ELLGTFNVGDYIPCLEWVNKITGFDSKVDKVAKDLDTFLEFVIEAHMIRNEKEENRA---GESKDLVDVLLEIQNGKE 275          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.708e-26
Identity = 80/257 (31.13%), Postives = 127/257 (49.42%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLET-DMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNL---LNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVKKSDDLD 913
            IIG+LH       PH+S  KL++K GP+  +  G  P +V SS + A+ ++KTHD V+ASRP       +S G  DV FSP G YWR+A+ I V  LLS  RV S++ V  EE    + +++  C     ++ + + +   +     A G R  ++++ G     +  +  +  ELL  F  GD+     W    TG   +V K ++ L   L  V E      K+++   TG       +DF+DVL  ++  ++ D
Sbjct:   46 IIGNLHQLGS--LPHRSLHKLSQKYGPVMLLHFGSKPVIVASSVDAARDIMKTHDVVWASRPKSSIVDRLSYGSKDVGFSPFGEYWRRAKSITVLHLLSNTRVQSYRNVRAEETANMIGKIRQGCDSSVINLGEHLCSLTNNIISRVALG-RTYDEKESG-----IEHIIEQFVELLGIFNVGDYIPRLEWVNKFTGLDAKVKKVAKELDMFLEIVIEEHIIRKKKEEYTSTGE-----AKDFVDVLLEIQNGNETD 289          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.489e-26
Identity = 89/264 (33.71%), Postives = 129/264 (48.86%), Query Frame = 2
Query:  155 IIGHLHLFYKERKP-HKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRV--KARCG-LETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNA---------VDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVKKSDD 907
            IIG+ H   + R P H++   LAEK GPI +++ G VP VVVSS E AK  LKTHD +FASRP     K+      D+ FSP G +WR+ RKICV ELL+ KR+ SFK V  EE++  +  +  ++  G +  ++S  I     +         +F  D D G   K  A + +EV   +     GDF        +L     + IK +    NA         +DE  + ++ R      G  +    +D IDVL  + K+D+
Sbjct:   51 IIGNFH---QVRLPLHRTLKNLAEKYGPILFLRFGSVPTVVVSSSEKAKHFLKTHDLIFASRPPTSVGKYFFYNFKDIAFSPYGDHWRKMRKICVLELLTSKRIESFKHVRQEELSAMIHSIWEESESGRIAVNVSKAISTSLANILWRILARKKF-SDNDLGADGKGFADLVVEVSIAVGSLNIGDFIP------YLDCLDLQGIKRALKKANARFDAFAEKMIDEHINASTIRNGEADAGCHV----KDIIDVLLEMAKNDN 300          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.489e-26
Identity = 77/244 (31.56%), Postives = 121/244 (49.59%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNED-FIDVL 883
            IIG++H       PH     L+ K G + +++LG V  +VVSS E AK+V+KTHD +FASRP +L+A+ +      V F+P G YWRQ RKI   ELLS KRV SF+ + +E +  F+ R+    G + +++  + +         A G        + +  + L SV  E  ++  GF  GD +    +   ++G  P++ K    L    D+I        +   + A    G E+  +DVL
Sbjct:   44 IIGNMHNLVGSPLPHHRLRDLSAKYGSLMHLKLGEVSTIVVSSPEYAKEVMKTHDHIFASRPYVLAAEIMDYDFKGVAFTPYGDYWRQLRKIFALELLSSKRVQSFQPIREEVLTSFIKRMATIEGSQVNVTKEVISTVFTITARTALG-------SKSRHHQKLISVVTEAAKISGGFDLGDLYPSVKFLQHMSGLKPKLEK----LHQQADQIMQNIINEHREAKSSATGDQGEEEVLLDVL 276          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.107e-25
Identity = 81/256 (31.64%), Postives = 125/256 (48.83%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMS--RVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVKKSDDLDV 916
            +IGHLHL +  + P  + A +A++ GP+ ++QLG V +VV+SS+E  K+ +K  D   A R   +  K +     D+ FSP   +WRQ RKICV+ELLS + V SF  +  +EV+R +   R  A  G   D+++ I        C AAFG    + E+       L  +  +   + +GF   D F        L     ++ +  R     VD I +   +  +   +G F   G ED IDVL R++K   + V
Sbjct:   44 LIGHLHLLWG-KLPQHALASVAKQYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACADRFESIGTKIMWYDNDDIIFSPYSVHWRQMRKICVSELLSARNVRSFGFIRQDEVSRLLGHLRSSAAAGEAVDLTERIATLTCSIICRAAFGSVIRDHEE-------LVELVKDALSMASGFELADMFPSSKLLNLLCWNKSKLWRMRRR----VDAILEAIVEEHKLKKSGEF---GGEDIIDVLFRMQKDSQIKV 284          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.888e-25
Identity = 74/256 (28.91%), Postives = 127/256 (49.61%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLET--DMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPR---VIKGSRNLLNAV-DEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVKKSD 904
            +IG+LH       PH+S   L+ + GP+  +  GRVP +VVSS ++A  ++KTHD   A+RP +   + +  G  ++ FSP G YWRQ + +C+  LL+ K+V SF+ V +EE++  M RV+      +  ++S+L+    +D     + G ++ ++E        +     ++ EL+ GF  G++     W   L G   +   V K   +L+  V  E  D T K                DF+DVL  +++ +
Sbjct:   42 VIGNLHQL--SLHPHRSLRSLSHRYGPLMLLHFGRVPVLVVSSSDVAHDLMKTHDLKVANRPQLKVVEKIFNGGREMVFSPYGEYWRQIKSVCIVNLLNKKKVQSFEKVREEEISEMMERVEKASSDSSPLNLSELLLTLTSDVTSRVSLGRKYSKEESMSDFKIQMR----KITELVGGFPVGEYIPCLAWIDKLRGVDEKAEEVSKAFGDLMEKVLQEHLDATDK-------------PTLDFVDVLLSLERHE 278          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.221e-25
Identity = 70/226 (30.97%), Postives = 122/226 (53.98%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWL--TGYTPRVIKGSRNLLNAVDEIFDKTSKRKQ 826
            IIG++ +   ++  H+  A LA+K G + ++++G +    VSS E+A+QVL+  D VF++RP+ ++  +++   AD+ F+  GP+WRQ RK+CV ++ S KR  S+  V D EV++ +  V    G   ++ + IFA   +    AAFG    + +DE         +  E  +L   F   DF   +   GW+   G   R++K   +L   +D+I D+  K+K+
Sbjct:   49 IIGNMLMM--DQLTHRGLANLAKKYGGLCHLRMGFLHMYAVSSPEVARQVLQVQDSVFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKVCVMKVFSRKRAESWASVRD-EVDKMVRSVSCNVGKPINVGEQIFALTRNITYRAAFGSACEKGQDE------FIRILQEFSKLFGAFNVADFIPYF---GWIDPQGINKRLVKARNDLDGFIDDIIDEHMKKKE 262          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.206e-25
Identity = 80/260 (30.77%), Postives = 131/260 (50.38%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLE----TDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEE----LLTGFYYGDFF-SEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVKKSDD 907
            +IG++H        H     LA+K GP+ +++LG V  ++V+S E+A++++KTHD  F+ RP  + ++ VS   + + FS +G YWRQ RKIC  ELL+ KRV SF+ + +EEV   + ++ A    E     +++  I++        AAF          G+KS+Y   VFI        LL GF   D + S  V+   + G T ++ K  R     + +I D+   R +     +      ED +DVL + +K  +
Sbjct:   52 LIGNIHQIVGSLPVHYYLKNLADKYGPLMHLKLGEVSNIIVTSPEMAQEIMKTHDLNFSDRPDFVLSRIVSYNGSGIVFSQHGDYWRQLRKICTVELLTAKRVQSFRSIREEEVAELVKKIAATASEEGGSIFNLTQSIYSMTFGIAARAAF----------GKKSRY-QQVFISNMHKQLMLLGGFSVADLYPSSRVFQ--MMGATGKLEKVHRVTDRVLQDIIDEHKNRNR----SSEEREAVEDLVDVLLKFQKESE 294          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 7.175e-25
Identity = 82/262 (31.30%), Postives = 125/262 (47.71%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEE----VNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWL----TGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVKKSDDLDV 916
            IIG+LH   K    +KSF K++++ GP+  ++LG VP +VVSSKE A++VLKTHD    +RP   +    +    D+ F+P G  WR+ RKI   EL S K++ SF+ + +EE    V +    V        D+  ++F+F     C  AFG  F + +    +   +  + +E E  L  F + DFF      GWL    +G   RV K    L N    + D   K  QP      +       +D++ +  K+D   V
Sbjct:   37 IIGNLHQLGKLL--YKSFHKISQEYGPVVLLRLGVVPVIVVSSKEGAEEVLKTHDLETCTRPKTAATGLFTYNFKDIGFAPFGDDWREMRKITTLELFSVKKLKSFRYIREEESELLVKKISKSVDETQNSSVDLRKVLFSFTASIICRLAFGQNFHQCDFVDMEK--VEELVLESEANLGTFAFADFFP----GGWLIDRISGQHSRVNKAFYKLTNFYKHVIDDHLKTGQPQDHSDIV----SVMLDMINKPTKADSFKV 286          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.598e-24
Identity = 83/254 (32.68%), Postives = 127/254 (50.00%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGP--IFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVK----ARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVKK 898
            IIGHLHL      PH SF  L  K G   +  +Q+G VP +VVS+ + A+ VL+THD V ASRP    A  +     DV F+P G YWR ARK+  T LLS K V S +   +EEV   ++R++    A  G   DM++L+  + +DF C A  G    E   +  ++K    +      LL GF   D+F +      +  +   +   ++++    D +F++    +  L  G    H +EDF+ +L  ++K
Sbjct:   65 IIGHLHLIGSH--PHVSFRDLHAKYGHNGLMLVQVGAVPTIVVSTPQAAEAVLRTHDHVLASRPRNPVADIIRYNSTDVAFAPYGVYWRTARKVVNTHLLSAKMVFSKRREREEEVRLVVARIRDAAEASPGTALDMTELLGGYASDFVCRAVLG----ESHRKQGRNKLFRELTETSAALLGGFNVEDYFPKL---ADVDLFLRIICAKAKSVSKRWDSLFNELLS-EYALSGGKQGDHNSEDFVHLLLSLQK 308          
The following BLAST results are available for this feature:
BLAST of FC878413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
C71A3_SOLME7.665e-2730.71Cytochrome P450 71A3 (Fragment) OS=Solanum melonge... [more]
C71A2_SOLME1.708e-2631.13Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
C75A1_PINTA6.489e-2633.71Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]
C71D9_SOYBN6.489e-2631.56Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
C71DD_MENPI1.107e-2531.64Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]
C71AE_ARATH1.888e-2528.91Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
C84A1_ARATH3.221e-2530.97Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C71DA_SOYBN4.206e-2530.77Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C71BZ_ARATH7.175e-2531.30Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C71C1_MAIZE1.598e-2432.68Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA49BF04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA49BF04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878413 ID=FC878413; Name=FC878413; organism=Citrus clementina; type=EST; length=918bp
AGGAAATTAAGTTGAGGGACTAATGGCCAACTTTAGCCCCGAAATCCTCT
TTCTGTCATTCGTTGTCTCGACGGCAATCCTCTACATGATTAATAATCGG
CGAAGGTCACTGCCAAATTCACCGTCACTGCCGTCACCACCAAACAAACT
TCCGATAATAGGTCACCTTCATCTCTTCTACAAAGAGCGCAAGCCACATA
AAAGTTTCGCTAAACTCGCAGAGAAGCTGGGTCCCATATTTTACATCCAG
CTCGGCCGAGTCCCCGCCGTTGTAGTCTCCTCTAAAGAGCTGGCCAAACA
AGTTCTCAAAACTCACGACCAGGTCTTCGCCAGCCGCCCAAGCATCCTCA
GCGCCAAGCACGTCTCCGTCGGCCCCGCTGACGTCACCTTCTCCCCCAAC
GGCCCTTACTGGCGCCAAGCTCGCAAGATCTGCGTCACCGAGTTACTCAG
CCCAAAACGAGTCAACTCTTTCAAAGTCGTCCTAGATGAGGAAGTGAACC
GGTTTATGAGCCGCGTGAAAGCCCGCTGTGGGTTAGAAACAGACATGAGT
GATCTTATTTTCGCCTTCTGTACTGATTTCTTTTGCCTTGCAGCATTTGG
GGTGAGGTTCATGGAAGATGAAGACGAAGGGCAAAAGAGTAAATACTTGG
CGAGTGTTTTCATAGAGGTTGAAGAGTTGCTGACAGGGTTTTATTATGGG
GATTTTTTCTCGGAGTGGGTTTGGCCCGGCTGGCTCACTGGGTACACACC
TAGGGTGATCAAGGGTTCTCGGAACTTGTTGAATGCTGTTGATGAGATTT
TCGATAAGACTTCCAAGAGGAAGCAGCCGCTGGGTACCGGCGCATTCTTA
TTGCACGGTAATGAAGATTTTATTGATGTTTTGCGTAGAGTCAAAAAAAG
CGACGATTTGGATGTGCC
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