FC878413

Overview
NameFC878413
Unique NameFC878413
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length918
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.087e-24
Identity = 83/261 (31.80%), Postives = 137/261 (52.49%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRP-SILSAKHVSVGPAD--VTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRV--KARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDE--IFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVKKSDDLDV 916
            IIGHLHL      PH+ F KL+ + GPI  + LG VP VV S+ E AK+ LKTH+  F++RP   ++ K ++    D    F+P GPYW+  +K+C++ELLS + ++ F  V  +E  RF+SRV  K   G   D  D +     +         +  E++++ ++ K L S    + EL+  F   DF   ++ P  L G+  R IK +R+  + V +  I  +  +R++   TG       +D +DVL  + + ++ ++
Sbjct:   38 IIGHLHLV--SPIPHQDFYKLSTRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRPGQNVAVKGLAYDSQDFLFAFAPFGPYWKFMKKLCMSELLSGRMMDQFLPVRQQETKRFISRVFRKGVAGEAVDFGDELMTLSNNIVSRMTLSQKTSENDNQAEEMKKLVS---NIAELMGKFNVSDFI-WYLKPFDLQGFN-RKIKETRDRFDVVVDGIIKQRQEERRKNKETGT--AKQFKDMLDVLLDMHEDENAEI 289          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.087e-24
Identity = 74/226 (32.74%), Postives = 116/226 (51.33%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMSD-----LIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGW----LTGYTPRVIKGSRNLLNAVDEIFD 805
            IIG+LH F   R  HKS  K++++ GP+  +  G VP ++VSSKE A++VLKTHD    SRP  + +   +    D+ F+P G  WR+ RKI V+EL S K++ SF+ + ++E ++ + R  ++  LET  S      +IF F     C  +FG  F +  D     + +  + +E E  L    + DF       GW    ++G    V+K    L N  + + D
Sbjct:   37 IIGNLHQF--GRFLHKSLHKISQEYGPVMLLHFGVVPVIIVSSKEGAEEVLKTHDLETCSRPKTVGSGLFTYNFKDIGFAPYGENWREMRKIAVSELFSQKKLKSFRYIREDE-SQLLVRKVSKSALETPTSSVNLRKVIFTFAASIICRLSFGQNFCDFVD----METVEELVLESETNLGSLAFADFLP----AGWIIDRISGQHSTVMKAFSKLTNFFELVID 251          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.074e-24
Identity = 83/260 (31.92%), Postives = 123/260 (47.31%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLE--TDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEV----EELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRN----LLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVKKSD 904
            IIG+LH      KPH+S  KL+EK GP+ Y++LG+VP+VV S+ E  K VLKT D+   SR  +     +S    D+ F+P   YW+  RK+ V EL + KRV SF+ + +EEV  F+  +K    LE   +++  +        C   FG+       EG K   L + + EV     E+L  F   D+F        + G   R I G  N    +    D  FD   K     G         +D +D+L +V++ +
Sbjct:   38 IIGNLHQLGS--KPHRSMFKLSEKYGPLVYLKLGKVPSVVASTPETVKDVLKTFDKDCCSRAFLTYPARISYNLKDLAFAPYSKYWKAVRKMTVVELYTAKRVKSFRNIREEEVASFVEFIKHSASLEEIVNLNQTLVKLSGSVICRVGFGINL-----EGSK---LENTYEEVIHGTMEVLGSFAASDYFPV------IGGIIDR-ITGLHNKCEKVFKGTDSFFDHCIKHHLEDG------GSKDDIVDLLLKVERGE 274          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 7.932e-24
Identity = 78/252 (30.95%), Postives = 124/252 (49.21%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLE--TDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKT--SKRKQPLGTGAFLLHGNEDFIDVLRRVKK 898
            +IG+L L  ++  P + FA  A+K GPI   ++G    VV+SS ELAK++LKT D  FA RP     + +S G  D+  +   PY+R+ RK+ +  L SP RV +FK V +EE  R M ++          D+S+L+  F     C  AFG ++ ED   G++ K    +    + +L   ++ DFF    +   L+G T  + +        + E+ ++T   KR +P           E  ID+L  + K
Sbjct:   39 VIGNL-LQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQAFGKKYNED---GEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKRVKP---------ETESMIDLLMGIYK 277          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.932e-24
Identity = 73/234 (31.20%), Postives = 116/234 (49.57%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLET--DMSDLIFAFCTDFFCLAAFGVRFME----DEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGW----LTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQ 826
            IIG+LH   K    H+SF KL++  GP+ ++  G VP VVVS++E A++VLKTHD    +RP + + K  S    D+ F+  G  WR+ RK+ + EL S K++ +F+ + +EE    ++++       T  D+   +F++     C  AFG  F E    D D+      +  + +E E  L  F + DFF   +  GW    ++G    + K    L N    + D   K  Q
Sbjct:   37 IIGNLHQLGKSL--HRSFHKLSQNYGPVMFLHFGVVPVVVVSTREAAEEVLKTHDLETCTRPKLTATKLFSYNYKDIGFAQYGDDWREMRKLAMLELFSSKKLKAFRYIREEESEVLVNKLSKSAETRTMVDLRKALFSYTASIVCRLAFGQNFHECDFVDMDK------VEDLVLESETNLGSFAFTDFFPAGL--GWVIDRISGQHSELHKAFARLSNFFQHVIDDHLKPGQ 260          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.767e-23
Identity = 70/243 (28.81%), Postives = 114/243 (46.91%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVL 883
            +IG+LH     + PH+S   L+ + GP+  +  G VP +V S+ E A+ VLKTHD+VFASRP     + +     ++  +P G YWRQ + + V  LLS K V SF+ V  EE+   M  ++       ++S ++ +   D  C  A G ++    D          +   +   L  F  G +     W  W++G   R+ K +    N  D++ ++  +  +  G G        DF+DVL
Sbjct:   38 LIGNLHQL--SQHPHRSLCYLSHRYGPLMLLHFGSVPVIVASTAEAARDVLKTHDRVFASRPRSKIFEKLLYKSRNMASAPYGEYWRQMKSVSVLHLLSNKMVRSFQDVRQEEITLMMETIRKSSSKPVNLSKILSSLTNDVICRVALGRKYGVGTD-------FKELIDRLMRQLGTFTIGSYVPWLAWTDWVSGLEARLEKTA----NDFDKLLERIVQDHED-GDG-----DKTDFVDVL 261          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.937e-23
Identity = 75/253 (29.64%), Postives = 119/253 (47.04%), Query Frame = 2
Query:  161 GHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLET--DMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVKKSDDLD 913
            G LHL   +  P  +   LA K GP+ +++ G+V  VV+SS   A++VL+  D  FASRPS+L ++    G  D+ F+P G YWR  RK+C  ELLS K V     + D E    +  ++A  G +    ++ L+ +    F   AAFG         G+  +   +   E  +   GF +GD F    +   +TG   R+      L   +D +FDK   + +         +  +  ++VL R+K   +LD
Sbjct:   47 GLLHLLRSQ--PQVALRDLAGKYGPVMFLRTGQVDTVVISSPAAAQEVLRDKDVTFASRPSLLVSEIFCYGNLDIGFAPYGAYWRMLRKLCTVELLSTKMVRQLAPIRDGETLALVRNIEAAAGGKKPFTLATLLISCTNTFTAKAAFG-----QACGGELQEQFLTALDEALKFSNGFCFGDLFPSLRFIDAMTGLRSRL----ERLRLQLDTVFDKIVAQCES--------NPGDSLVNVLLRIKDQGELD 280          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.937e-23
Identity = 71/227 (31.28%), Postives = 115/227 (50.66%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLET--DMSDLIFAFCTDFFCLAAFGVRFME----DEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGW----LTGYTPRVIKGSRNLLNAVDEIFD 805
            IIG+LH   K    H+SF KL+++ GP+ +++ G VP VV S+KE A++VLKTHD    +RP + +    +    D+ F+  G  WR+ RK+ + EL S K++ +F+ + +EE    + +V      +T  D+   +F++     C  AFG  F E    D D+      +  + +E E  L  F + DFF   +  GW    ++G   R+ K    L N    + D
Sbjct:   37 IIGNLHQLGKSL--HRSFYKLSQEYGPVMFLRFGVVPVVVFSTKEAAEEVLKTHDLETCTRPKLSATGLFTYNFKDIGFAQYGEDWREMRKLAMLELFSSKKLKAFRYIREEESELLVKKVTESAQTQTLVDLRKALFSYTASIVCRLAFGQNFHECDFVDMDK------VEELVLESETNLGSFAFIDFFPAGL--GWAIDRISGQHSRLHKAFARLSNFFQHVID 253          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 3.937e-23
Identity = 68/226 (30.09%), Postives = 111/226 (49.12%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRV-KARCGLE---TDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKR 820
            +IG+LH        H+S   L+ + GP+  +  GR P ++VSS ++A  V+KTHD V A+RP       +  G  DV F+P G YWRQ + IC+  LL+ K V S++ + +EE+ R + ++ KA C       ++S ++     D  C  A G ++   +D G   + +   F     LL  F  G++     W           I+G  + +  VD+ FD+  +R
Sbjct:   41 VIGNLHQL--SLHTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDVMKTHDLVCANRPKTKVVDKILSGGRDVAFAPYGEYWRQMKSICIQNLLNNKMVRSYEKIREEEIKRMIEKLEKASCSSSPSPVNLSQILMTLTNDIICRVALGRKYSGKKD-GIDVENIVRTF---AALLGEFPVGEYIPSLSWID--------RIRGLDHKMEVVDKRFDEFLER 252          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.142e-23
Identity = 75/257 (29.18%), Postives = 117/257 (45.53%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRV--KARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKT-----SKRKQPLGTGAFLLHGNEDFIDVLRRVKKSD 904
            I+G++H       PH+S   L+ K GP+  + LG V  VVV S E A++VLK HD    +RP +   K        + F+  G Y+R  RK+CV EL S KR NSF+ + +EE++R ++     A  G   D++  +  F   F C  AFG+ F   +  G  ++    +F E   ++  F   D F  +   GW+      +    R     +D  + K       K+K             ED IDVL +++  +
Sbjct:   45 ILGNIHQLGS--LPHRSLRDLSLKYGPVITVYLGSVRTVVVHSPETAEEVLKLHDSECCTRPKLSITKSFFYDGLGLGFTKWGDYYRDVRKLCVLELFSVKRANSFRNIREEELSRLVNSFSDSASSGSSVDLTANLAKFVASFTCRMAFGLSF---QGSGMDNETFLELFTEANRVIGKFAAADIFPGF---GWILDRISGLDSSRRKSFQDLDTFYQKAIVDHREKKK---------TEDREDLIDVLLKLQSQE 284          
The following BLAST results are available for this feature:
BLAST of FC878413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
C93A1_SOYBN2.087e-2431.80Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C71B5_ARATH2.087e-2432.74Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
C71BD_ARATH6.074e-2431.92Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]
C83A1_ARATH7.932e-2430.95Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C71BM_ARATH7.932e-2431.20Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C71AN_ARATH1.767e-2328.81Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C99A3_ORYSJ3.937e-2329.64Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
C71BL_ARATH3.937e-2331.28Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]
C71AK_ARATH3.937e-2330.09Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C71B6_ARATH5.142e-2329.18Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA49BF04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA49BF04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878413 ID=FC878413; Name=FC878413; organism=Citrus clementina; type=EST; length=918bp
AGGAAATTAAGTTGAGGGACTAATGGCCAACTTTAGCCCCGAAATCCTCT
TTCTGTCATTCGTTGTCTCGACGGCAATCCTCTACATGATTAATAATCGG
CGAAGGTCACTGCCAAATTCACCGTCACTGCCGTCACCACCAAACAAACT
TCCGATAATAGGTCACCTTCATCTCTTCTACAAAGAGCGCAAGCCACATA
AAAGTTTCGCTAAACTCGCAGAGAAGCTGGGTCCCATATTTTACATCCAG
CTCGGCCGAGTCCCCGCCGTTGTAGTCTCCTCTAAAGAGCTGGCCAAACA
AGTTCTCAAAACTCACGACCAGGTCTTCGCCAGCCGCCCAAGCATCCTCA
GCGCCAAGCACGTCTCCGTCGGCCCCGCTGACGTCACCTTCTCCCCCAAC
GGCCCTTACTGGCGCCAAGCTCGCAAGATCTGCGTCACCGAGTTACTCAG
CCCAAAACGAGTCAACTCTTTCAAAGTCGTCCTAGATGAGGAAGTGAACC
GGTTTATGAGCCGCGTGAAAGCCCGCTGTGGGTTAGAAACAGACATGAGT
GATCTTATTTTCGCCTTCTGTACTGATTTCTTTTGCCTTGCAGCATTTGG
GGTGAGGTTCATGGAAGATGAAGACGAAGGGCAAAAGAGTAAATACTTGG
CGAGTGTTTTCATAGAGGTTGAAGAGTTGCTGACAGGGTTTTATTATGGG
GATTTTTTCTCGGAGTGGGTTTGGCCCGGCTGGCTCACTGGGTACACACC
TAGGGTGATCAAGGGTTCTCGGAACTTGTTGAATGCTGTTGATGAGATTT
TCGATAAGACTTCCAAGAGGAAGCAGCCGCTGGGTACCGGCGCATTCTTA
TTGCACGGTAATGAAGATTTTATTGATGTTTTGCGTAGAGTCAAAAAAAG
CGACGATTTGGATGTGCC
back to top