FC878413

Overview
NameFC878413
Unique NameFC878413
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length918
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 6.715e-23
Identity = 70/219 (31.96%), Postives = 111/219 (50.68%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLET--DMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFD 805
            IIG+LH    +   HK    L++K GP+ +++LG  P VV+SS E A++ LKTHD    SRP  ++++  S    D+ F   G  WR+ RK+ V E  S K+V SFK + +EE +  + ++K     ++  D+S ++F          AFG  F +++   Q+S  +  +  E    +T F + DFF       W  G+     K   N+ N VD  F+
Sbjct:   41 IIGNLHQL--QGLLHKCLHDLSKKHGPVMHLRLGFAPMVVISSSEAAEEALKTHDLECCSRPITMASRVFSRNGKDIGFGVYGDEWRELRKLSVREFFSVKKVQSFKYIREEENDLMIKKLKELASKQSPVDLSKILFGLTASIIFRTAFGQSFFDNKHVDQES--IKELMFESLSNMT-FRFSDFFPT-AGLKWFIGFVSGQHKRLYNVFNRVDTFFN 253          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.770e-23
Identity = 69/256 (26.95%), Postives = 126/256 (49.22%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVK--ARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIF----DKTSKRKQPLGTGAFLLHGNEDFIDVLRRVKKSD 904
            +IG+LH       PH++ + L+ + GP+  ++ GRVP ++VSS ++A  V+KTHD  FA+RP   SA  +S G  D+ F+P G YWR  + +C   LLS K V S +   +EE+   M  ++  +      ++S LI    +D       G ++   E+     K +   F++   L      G++     W G +TG   ++ K ++   + ++++     D T+ ++ P            DF+D+L  +++ +
Sbjct:   41 VIGNLHQL--SLHPHRALSSLSARHGPLMLLRFGRVPVLIVSSADVAHDVMKTHDLKFANRPITKSAHKISNGGRDLVFAPYGEYWRNVKSLCTIHLLSNKMVQSSEKRREEEITLLMETLEEASLSSSSVNLSKLITNMVSDIMGKVVLGKKY-SGEEGTIDVKTITKSFLDAVGLSP---VGEYIPSLAWIGKITGSDGKLEKITKQFGDFIEKVLQEHEDTTADKETP------------DFVDMLLTIQRDE 278          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.770e-23
Identity = 73/249 (29.32%), Postives = 122/249 (49.00%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLET--DMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEI----FDKTSKRKQPLGTGAFLLHGNEDFIDVL 883
            +IG+LH       PH+S   L+ + GP+  +  GRVP +VVSS ++A  ++KTHD   A+RP +   + +  G  +V FSP G YWRQ + +CV  LL+ K V SF  V +EE +  M +V+      +  ++S L+    +D     +FG    +  +E   S +   V  ++ EL+ GF   ++     W   + G   R  + S+   + +D++     D T+K               +DF+D+L
Sbjct:   41 VIGNLHQL--SLHPHRSLRSLSHRYGPLMLLHFGRVPILVVSSSDVAHDLMKTHDLKVANRPRLKVIETILNGGREVVFSPYGDYWRQIKTVCVVHLLNKKMVQSFAKVREEERSVMMEKVEKASSDSSPLNLSKLLITLTSDVASRVSFG---KKHSNEASMSDFKNQV-RKITELVGGFPVSEYIPCLAWIDQIRGLYNRAEEVSKIFGDLMDKVVQEHLDATNK-------------PTKDFVDIL 270          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.145e-22
Identity = 80/252 (31.75%), Postives = 128/252 (50.79%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRP-SILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFM--------EDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVL 883
            IIGHLHL      PH+ F KL+ + GPI ++ LG VP VV S+ E AK+ LKTH+  F++RP + ++ + ++ G  D  F+P GPYW+  +K+C++ELL    ++ F  V   E  +F+ RV     L+  +S     F  +F  L+   V  M        EDE+E ++ + L     +  EL   F   DF S ++    L G+  R+ K    + +  D + D+  K+++          G  +F D+L
Sbjct:   40 IIGHLHLL--SPTPHQDFHKLSLRYGPIIHLFLGSVPCVVASTAEAAKEFLKTHEPAFSNRPANTVAVETLTYGFQDFLFAPYGPYWKFMKKLCMSELLGGHMLDQFLPVRQXETKKFIKRV-----LQKGISGEAVDFGGEFITLSNNIVSRMIVSQTSTTEDENEVEEMRKLVK---DAAELSGKFNISDFVS-FLKRFDLQGFNKRLEK----IRDCFDTVLDRIIKQREEERRNKNETVGKREFKDML 276          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.145e-22
Identity = 68/220 (30.91%), Postives = 108/220 (49.09%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLET--DMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDK 808
            IIG+LH  Y    PHK    L +  GP+  +QLG VP VV+SS + A++VLKTHD    SRP  +++K +S    D+ F+P G  WR  RK+ V EL S K+ NSF+ + +EE +  + ++      ++  ++   +F       C  AFG    E E   + S  +  +    E++   F + +FF      GW+        K    +   +D  F++
Sbjct:   40 IIGNLH--YLNGLPHKCLLNLWKIHGPVMQLQLGYVPLVVISSNQAAEEVLKTHDLDCCSRPETIASKTISYNFKDIGFAPYGEEWRALRKLAVIELFSLKKFNSFRYIREEENDLLVKKLSEASEKQSPVNLKKALFTLSASIVCRLAFGQNLHESEFIDEDS--MEDLASRSEKIQAKFAFSNFFP----GGWILDKITGQSKSLNEIFADLDGFFNQ 251          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.145e-22
Identity = 77/259 (29.73%), Postives = 119/259 (45.95%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRV--KARCGLETDMSDLIFAFCTDFFCLAAFGVRFME----DEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVKKSDDLD 913
            IIG+LH       PH  F  L++K GP+  +  G VP VV+SSKE A++ LKT D    SRP  ++ + +S    D+ F+P G  W+  RK+ V ELL+ K+  SF+ + +EE +  + ++   A      ++   +F       C  AFGV   +    DED       +A +  + E L+ G  + DFF      GWL        K   N+ + +D  F          G     +  N D +DV+  + K  + D
Sbjct:   41 IIGNLHNL--TGLPHTCFRNLSQKFGPVMLLHFGFVPVVVISSKEGAEEALKTQDLECCSRPETVATRMISYNFKDIGFAPYGEEWKALRKLVVMELLNTKKFQSFRYIREEENDLLIKKLTESALKKSPVNLKKTLFTLVASIVCRLAFGVNIHKCEFVDEDN------VADLVNKFEMLVAGVAFTDFFP---GVGWLVDRISGQNKTLNNVFSELDTFFQNVLDDHIKPGR---QVSENPDVVDVMLDLMKKQEKD 285          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71BG_ARATH (Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=CYP71B16 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.496e-22
Identity = 75/258 (29.07%), Postives = 121/258 (46.90%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRV--KARCGLETDMSDLIFAFCTDFFCLAAFGVRFME----DEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVKKSDDL 910
            +IG+LH   +   PH+SF +LAE+ G +  +  G VP  V+SS+E A++VL+THD    +RP ++ ++ +S G  D++F+P G  WR+ RK  V EL   K+V  F  +++EE N  + ++   A      D+S  +F          AFG  F +    DED+      +  +  E E     F   DFF      GWL  +     +   N+   +D +F +        G         +  +DV+ +  K D L
Sbjct:   39 VIGNLHQVGE--LPHRSFQRLAERTGHVMLLHFGFVPVTVISSREAAEEVLRTHDLKCCTRPKLVGSRLISRGFKDISFTPYGEEWRERRKFLVRELFCFKKVQYFGYIVEEECNLLVKKLTESAVGRPPVDLSKSLFWLAASILFRIAFGQSFHDNKFIDEDK------IDELIFETETAQASFTCSDFF-PIAGLGWLADWISGKHRWLNNVFFKLDALFQRVIDDHSDPGRWKDHKDIVDVMLDVMHKQGKDDSL 287          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.496e-22
Identity = 56/156 (35.90%), Postives = 86/156 (55.13%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEE----VNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRF 610
            ++G+LH       PH+S   L+ + GP+  +  G VP +V SS E A++++K  D  F++RP++   + +     DV F+P G YWRQ R ICV +LLS KRV SF+ V +EE    V + M   K       +++DL+     D FC  A G ++
Sbjct:   36 VLGNLHQL--GTFPHRSLQSLSRRYGPVMQLHFGSVPVLVASSPEAAREIMKNQDLNFSNRPNLSIPRRLLYDNHDVAFAPYGEYWRQIRSICVLQLLSNKRVQSFRRVREEETSIMVEKIMQLQKTTPTAAVNLTDLLTCLTNDVFCRIALGKKY 189          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.954e-22
Identity = 70/188 (37.23%), Postives = 104/188 (55.32%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGP-IFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVK--ARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFF 709
            IIGHLHL      P+ S A LA + GP +  ++LG VP VVVSS  +A+ VL+T+D VF+SRP  L +  +  G  D  F+P G ++R+ARK+    LL+  +V S +   +EEV   + RV+  A      DMS+L+ +F  +  C A  G +F  +E   +  + L  +      LL GF+  D+F
Sbjct:   77 IIGHLHLMGDI--PYVSLAALATRYGPDLMLLRLGAVPTVVVSSPRVAEAVLRTYDHVFSSRPRSLVSDIIMYGATDSCFAPYGDHFRKARKLVTVHLLNASKVRSQRPAREEEVRGALDRVRRAAAAREPVDMSELLHSFVNNLVCRAVSG-KFSMEEGRNRLFRELTDI---NAGLLGGFHIQDYF 258          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.333e-22
Identity = 66/226 (29.20%), Postives = 110/226 (48.67%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVK--ARCG--LETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKR 820
            +IG+LH        H+S   L+ + GP+  +  GR P ++VSS ++A  +LKT+D + A+RP       +  G  DV F+P G YW+Q + IC+  LLS K V S+K + ++E+   + +V+  + C      ++S L      D  C AA G ++   ED G   + +   F     L+  F  G++     W           I+G  + +  VD+ FD+  +R
Sbjct:   42 VIGNLHQL--SLNTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDILKTYDVICANRPKTKVIDKILRGGRDVAFAPYGEYWKQMKSICIQNLLSNKMVRSYKKIREDEIKLMIEKVENASSCSPPSPVNLSQLFMTLTNDIICRAALGRKYSSKED-GIDVENIVRAF---SALVGEFPIGEYIPSLSWID--------KIRGQDHKMEEVDKRFDEFLER 253          
The following BLAST results are available for this feature:
BLAST of FC878413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
C71B4_ARATH6.715e-2331.96Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C71AG_ARATH8.770e-2326.95Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]
C71AF_ARATH8.770e-2329.32Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]
C93A3_SOYBN1.145e-2231.75Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C71BN_ARATH1.145e-2230.91Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]
C71B7_ARATH1.145e-2229.73Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]
C71BG_ARATH1.496e-2229.07Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=C... [more]
C71A6_NEPRA1.496e-2235.90Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C71C4_MAIZE1.954e-2237.23Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C71AJ_ARATH3.333e-2229.20Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA49BF04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA49BF04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878413 ID=FC878413; Name=FC878413; organism=Citrus clementina; type=EST; length=918bp
AGGAAATTAAGTTGAGGGACTAATGGCCAACTTTAGCCCCGAAATCCTCT
TTCTGTCATTCGTTGTCTCGACGGCAATCCTCTACATGATTAATAATCGG
CGAAGGTCACTGCCAAATTCACCGTCACTGCCGTCACCACCAAACAAACT
TCCGATAATAGGTCACCTTCATCTCTTCTACAAAGAGCGCAAGCCACATA
AAAGTTTCGCTAAACTCGCAGAGAAGCTGGGTCCCATATTTTACATCCAG
CTCGGCCGAGTCCCCGCCGTTGTAGTCTCCTCTAAAGAGCTGGCCAAACA
AGTTCTCAAAACTCACGACCAGGTCTTCGCCAGCCGCCCAAGCATCCTCA
GCGCCAAGCACGTCTCCGTCGGCCCCGCTGACGTCACCTTCTCCCCCAAC
GGCCCTTACTGGCGCCAAGCTCGCAAGATCTGCGTCACCGAGTTACTCAG
CCCAAAACGAGTCAACTCTTTCAAAGTCGTCCTAGATGAGGAAGTGAACC
GGTTTATGAGCCGCGTGAAAGCCCGCTGTGGGTTAGAAACAGACATGAGT
GATCTTATTTTCGCCTTCTGTACTGATTTCTTTTGCCTTGCAGCATTTGG
GGTGAGGTTCATGGAAGATGAAGACGAAGGGCAAAAGAGTAAATACTTGG
CGAGTGTTTTCATAGAGGTTGAAGAGTTGCTGACAGGGTTTTATTATGGG
GATTTTTTCTCGGAGTGGGTTTGGCCCGGCTGGCTCACTGGGTACACACC
TAGGGTGATCAAGGGTTCTCGGAACTTGTTGAATGCTGTTGATGAGATTT
TCGATAAGACTTCCAAGAGGAAGCAGCCGCTGGGTACCGGCGCATTCTTA
TTGCACGGTAATGAAGATTTTATTGATGTTTTGCGTAGAGTCAAAAAAAG
CGACGATTTGGATGTGCC
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