FC878413

Overview
NameFC878413
Unique NameFC878413
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length918
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71BJ_ARATH (Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=CYP71B19 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.812e-21
Identity = 72/219 (32.88%), Postives = 107/219 (48.86%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLE---TDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIF 802
            +IG+LH   +   PH+S   LAE+ GP+  +  G VP  VVSS+E A++VL+THD    SRP ++  + +S    D+ F+P G  W+  RK  + EL   K+V SF+ + +EE N F+ +  +   ++    D+S  +F          A G  F E  D   K K    VF E E  L  F   DFF      GWL  +     K   ++   +D +F
Sbjct:   39 VIGNLHQIGE--LPHRSLQHLAERYGPVMLLHFGFVPITVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRDFKDIGFTPYGNEWKARRKFALRELFCLKKVQSFRHIREEECN-FLVKQLSESAVDRSPVDLSKSLFWLTASILFRVALGQNFHE-SDFIDKEKIEELVF-EAETALASFTCSDFFPV-AGLGWLVDWFSGQHKRLNDVFYKLDALF 251          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.072e-20
Identity = 79/263 (30.04%), Postives = 123/263 (46.77%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRV--KARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVW---PGWLTGYTPRVIKGSRNLLNAVDEIF----DKTSKRKQPLGTGAFLLHGNEDFIDVLRRVKKSDDLDV 916
            IIGHLHL      PH+ F KL+ + GPI  + LG VP VV S+ E AK+ LKTH+  F++RP     ++V+V      F P GP  +  +K+C++ELL  + ++ F  V  +E  +F+ RV  K   G   D          +            EDE + ++ + L +   +V EL+  F   DF    +W   P  L G+  R+ K        +D I     ++    K+  GT  F     +D +DVL  + + D  ++
Sbjct:   38 IIGHLHLV--SPIPHQDFYKLSLRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRP----GQNVAVQFLTYVFGPYGPSVKFIKKLCMSELLGGRMLDQFLPVRQQETKKFIKRVLQKGIAGEAVDFGGEFMRLSNNIISRMTMNQTSSEDEKQAEEMRMLVA---DVAELMGTFNVSDF----IWFLKPFDLQGFNKRIRKTRIRFDAVLDRIIKQREEERRNNKEIGGTRQF-----KDILDVLLDIGEDDSSEI 282          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.072e-20
Identity = 56/144 (38.89%), Postives = 84/144 (58.33%), Query Frame = 2
Query:  197 HKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSIL-SAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDED 625
            H     LA+K GP+ ++++G V  +V SS ++A+++ +THD +FA RPS L S K VS   +D+  SP G YWRQ RKI + ELLS K V SF+ + +EEV  F+  + ++ G   ++S  I          AAFG +    E+
Sbjct:   48 HHILRDLAKKYGPLMHLKIGEVSTIVASSPQIAEEIFRTHDILFADRPSNLESFKIVSYDFSDMVVSPYGNYWRQLRKISMMELLSQKSVQSFRSIREEEVLNFIKSIGSKEGTRINLSKEISLLIYGITTRAAFGEKNKNTEE 191          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.400e-20
Identity = 76/259 (29.34%), Postives = 123/259 (47.49%), Query Frame = 2
Query:  161 GHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARC-------GLETDMSDLIFAFCTD-FFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVKKSDDLD 913
            G LHL      P  +  +LA K GP+ ++++G++  VVVSS   A++VL+  D +FASRPS+L ++       DV F+P G YWR  RK+C  ELLS K V     V ++E    +  +KA         G +      +   CT+     AAFG     +  E    ++L ++ + + +   GF +GD F    +   +TG   R+ +    L    D +FDK   + +         H  +  ++VL R++   DL+
Sbjct:   71 GLLHLLRSH--PQVALRELASKYGPVMFLRMGQIDTVVVSSPAAAQEVLRDKDVMFASRPSLLVSEIFCYDNLDVGFAPYGAYWRMLRKLCTVELLSTKVVRQLAPVRNDETLTLVRNIKAASSGHGGGGGKKPVTLARLLTTCTNTITAKAAFGQACGVELQE----QFLTALDVGL-KFSGGFCFGDLFPSLRFIDAMTGLRSRLWRARGQL----DSVFDKIIAQCEE--------HQGDSLVNVLLRIRDQGDLE 310          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71BE_ARATH (Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=CYP71B14 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.949e-20
Identity = 59/152 (38.82%), Postives = 78/152 (51.32%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLE--TDMSDLIFAFCTDFFCLAAFGV 604
            IIG+LH      KP +S  KL+EK G +  ++ G V AVV S+ E  K VLKT D    SRP +     V+    D+ FSP   YWR+ RK+ V EL + KRV SF+ V  EEV  F+  +K    LE   +M   +        C   FG+
Sbjct:   38 IIGNLHQLGS--KPQRSLFKLSEKYGSLMSLKFGNVSAVVASTPETVKDVLKTFDAECCSRPYMTYPARVTYNFNDLAFSPYSKYWREVRKMTVIELYTAKRVKSFQNVRQEEVASFVDFIKQHASLEKTVNMKQKLVKLSGSVICKVGFGI 187          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.949e-20
Identity = 62/188 (32.98%), Postives = 93/188 (49.47%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLE--TDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQK-SKYLASVFIEVEELLTGFYYGDFF 709
            IIG+LH   +  KPH++  +L++  GP+  ++LG V  VV +S E  + VLKT+D    SRP +     ++    D+ FSP   YWRQ RK+ V EL + KRV SF+ + +EEV  F+   K     E   ++S  I        C   FG+       EG K       + ++  E+L      D+F
Sbjct:   38 IIGNLHQLGE--KPHRAMVELSKTYGPLMSLKLGSVTTVVATSVETVRDVLKTYDLECCSRPYMTYPARITYNLKDLVFSPYDKYWRQVRKLTVVELYTAKRVQSFRHIREEEVASFVRFNKQAASSEETVNLSQKILKMSGSVICRIGFGINL-----EGSKLENTYQEIIVQAFEVLGSLAAVDYF 218          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71AS_ARATH (Putative cytochrome P450 71A28 OS=Arabidopsis thaliana GN=CYP71A28 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.076e-20
Identity = 69/261 (26.44%), Postives = 122/261 (46.74%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVP----AVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRV--KARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLR-RVKKSDDLDV 916
            +IG+LH       PH+SF  L+ +L       L   P    +  +SS ++A  V+KTHD  FA+RP   +   +  G  DV FS  G YWRQ + +C   LL  + V SF+ V +EE+   + ++  ++   L  ++SDL+     D  C  A G ++  +E+       L  V     ELL  F  GD+     W   + G   ++ + S+  +  ++ +  +     +   T         DF+D+L  +++K+++ ++
Sbjct:   40 VIGYLHQL--SLHPHRSFRSLSLRLWSAHAPSLRSCPYPRFSKYISSSDVAHDVMKTHDLKFANRPKTKAVDIIINGGRDVAFSSYGEYWRQMKSLCTVHLLGRQMVRSFEKVREEEITSVIWKLEKQSSSSLPVNLSDLLLNMSNDVICRIAVGRKYSREENTSDFENQLRKVM----ELLGAFPVGDYIPGLAWIDKVRGLDRKMEEVSKTFVEFLERVVQEHVDEGENKET--------FDFVDILLIQLEKTNEFEL 286          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.548e-19
Identity = 51/114 (44.74%), Postives = 69/114 (60.53%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEV 496
            IIGHL L    + PHK+   LA+K GPIF I++G   AVVVS+ E+AK+   T+D   +S P ++SA  +    + +  +P GPYWRQ RKI ++E LSP RV     V   EV
Sbjct:   46 IIGHLPLLLGSKTPHKTLGDLADKYGPIFSIKIGAKNAVVVSNWEMAKECYTTNDIAVSSLPDLISANLLCYNRSMIVVAPYGPYWRQLRKILMSEFLSPSRVEQLHHVRVSEV 159          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.022e-19
Identity = 75/264 (28.41%), Postives = 121/264 (45.83%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLET--DMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWL----TGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFI----DVLRRVKKSDDLDV 916
            +IG+LH     R  H S  KL+ + GP+  ++ G VP  V SS E AK+VLKTHD    +RP +++    + G  D+ F+  G  WR+ +K    EL SPK+  SF+ + +EE +  + ++      +T  D+   +F++        AFG  F E +        L  +  E E  +    + DFF   +  GWL    +G   R+      L    +++ D+  K KQ        L  + D +    DV+ R +K   L +
Sbjct:   37 LIGNLHQL--GRLLHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNRPKLVANGLFTHGYKDIGFTQYGEEWREMKKFVGLELFSPKKHKSFRYIREEEGDLLVKKISNYAQTQTLVDLRKSLFSYTASIIFREAFGQNFRECDYINMDK--LEELVQETETNVCSLAFTDFFPRGL--GWLVDRISGQHSRMNIAFSKLTTFFEDVIDELLKTKQ--------LDDHSDLVTAMLDVINRPRKFGSLKI 286          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.883e-19
Identity = 71/231 (30.74%), Postives = 109/231 (47.19%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLET--DMSDLIFAFCTDFFCLAAFGVRFME----DEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWL----TGYTPRVIKGSRNLLNAVDEIFDKTSK 817
            IIG+LH     R  H SF KL+ + GP+  ++ G VP VV+SSKE AKQVLK+ D    SRP +++    +    D+ F+  G  WR+ +K+   EL +PK+   F+ + +EE +  + ++      +T  D+    F+F        +FG  F E    D D       L  +  E E  +  F + DFF   +  GWL    +G   R+ K    L      + D+  K
Sbjct:   39 IIGNLHQL--GRLLHSSFHKLSLEHGPVMLLRFGVVPMVVISSKEAAKQVLKSRDLETCSRPKLVANGLFTRNFKDIAFAQYGEDWREMKKLVGLELFNPKKHKFFRYIREEEGDLLVKKLSKSSQTQTLVDLRKAFFSFTAGIIFRVSFGQNFRECDFIDMDR------LEELVQESETNVFSFAFTDFFPTGL--GWLVDRISGQHSRIEKAFSKLTKFFQHVIDEELK 259          
The following BLAST results are available for this feature:
BLAST of FC878413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
C71BJ_ARATH4.812e-2132.88Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=C... [more]
C93A2_SOYBN1.072e-2030.04Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C71DC_CATRO1.072e-2038.89Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C99A2_ORYSJ1.400e-2029.34Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]
C71BE_ARATH6.949e-2038.82Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=C... [more]
C71B1_THLAR6.949e-2032.98Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
C71AS_ARATH9.076e-2026.44Putative cytochrome P450 71A28 OS=Arabidopsis thal... [more]
C82A2_SOYBN1.548e-1944.74Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
C71BU_ARATH2.022e-1928.41Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C71B8_ARATH5.883e-1930.74Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA49BF04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA49BF04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878413 ID=FC878413; Name=FC878413; organism=Citrus clementina; type=EST; length=918bp
AGGAAATTAAGTTGAGGGACTAATGGCCAACTTTAGCCCCGAAATCCTCT
TTCTGTCATTCGTTGTCTCGACGGCAATCCTCTACATGATTAATAATCGG
CGAAGGTCACTGCCAAATTCACCGTCACTGCCGTCACCACCAAACAAACT
TCCGATAATAGGTCACCTTCATCTCTTCTACAAAGAGCGCAAGCCACATA
AAAGTTTCGCTAAACTCGCAGAGAAGCTGGGTCCCATATTTTACATCCAG
CTCGGCCGAGTCCCCGCCGTTGTAGTCTCCTCTAAAGAGCTGGCCAAACA
AGTTCTCAAAACTCACGACCAGGTCTTCGCCAGCCGCCCAAGCATCCTCA
GCGCCAAGCACGTCTCCGTCGGCCCCGCTGACGTCACCTTCTCCCCCAAC
GGCCCTTACTGGCGCCAAGCTCGCAAGATCTGCGTCACCGAGTTACTCAG
CCCAAAACGAGTCAACTCTTTCAAAGTCGTCCTAGATGAGGAAGTGAACC
GGTTTATGAGCCGCGTGAAAGCCCGCTGTGGGTTAGAAACAGACATGAGT
GATCTTATTTTCGCCTTCTGTACTGATTTCTTTTGCCTTGCAGCATTTGG
GGTGAGGTTCATGGAAGATGAAGACGAAGGGCAAAAGAGTAAATACTTGG
CGAGTGTTTTCATAGAGGTTGAAGAGTTGCTGACAGGGTTTTATTATGGG
GATTTTTTCTCGGAGTGGGTTTGGCCCGGCTGGCTCACTGGGTACACACC
TAGGGTGATCAAGGGTTCTCGGAACTTGTTGAATGCTGTTGATGAGATTT
TCGATAAGACTTCCAAGAGGAAGCAGCCGCTGGGTACCGGCGCATTCTTA
TTGCACGGTAATGAAGATTTTATTGATGTTTTGCGTAGAGTCAAAAAAAG
CGACGATTTGGATGTGCC
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