FC878413

Overview
NameFC878413
Unique NameFC878413
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length918
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.356e-15
Identity = 72/262 (27.48%), Postives = 123/262 (46.95%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETD------MSDLIFAFCTDFFCLAAFGVRFMEDE----DEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVKKSDDL 910
            I+G+L+     R   + + + A+  GPI  + +G +  VVVSS ELAK+VLK HDQ  A R    S +  S    D+ ++  GP++ + RK+C  EL +PKR+ S + + ++EV   +  V   C L  +      +   + A   +     AFG RFM  E    ++G + K + S  +++   L+   +  +   W++P     +     +  R L  A+ E  + T  R++  G         + F+D L  +K   DL
Sbjct:   36 IVGNLYDIKPVR--FRCYYEWAQSYGPIISVWIGSILNVVVSSAELAKEVLKEHDQKLADRHRNRSTEAFSRNGQDLIWADYGPHYVKVRKVCTLELFTPKRLESLRPIREDEVTAMVESVFRDCNLPENRAKGLQLRKYLGAVAFNNITRLAFGKRFMNAEGVVDEQGLEFKAIVSNGLKLGASLSIAEHIPWL-RWMFPADEKAFAEHGARRDR-LTRAIME--EHTLARQKSSG-------AKQHFVDALLTLKDQYDL 284          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.356e-15
Identity = 77/267 (28.84%), Postives = 121/267 (45.32%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRP---SILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLE--TDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDE--------IFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVKKSDDLDV 916
            IIG++HL    R PH SFA L++  GPI  ++ G +  VVV+S E A++VL+T+DQ+ +SR    SI S  H  V  + V   P+   WR  RK+  T+L SP+R+ + K + + +V   +S +      E   D+S   F    +      F V       +  KS       I V E +      +FF    + G+L       ++G+R  L A  E          D     K    T +  +    DF+DVL  + + D+ ++
Sbjct:   47 IIGNIHLV--GRNPHHSFADLSKTYGPIMSLKFGSLNTVVVTSPEAAREVLRTYDQILSSRTPTNSIRSINHDKV--SVVWLPPSSSRWRLLRKLSATQLFSPQRIEATKTLRENKVKELVSFMSESSEREEAVDISRATFITALNIISNILFSVDL--GNYDSNKSGVFQDTVIGVMEAVGNPDAANFFP---FLGFLD------LQGNRKTLKACSERLFKVFRGFIDAKLAEKSLRDTNSKDVR-ERDFVDVLLDLTEGDEAEL 297          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.731e-15
Identity = 51/162 (31.48%), Postives = 81/162 (50.00%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMSDLIF------AFCTDFFCLAAFGVRFMEDE 622
            ++G+L+     R   + FA+ A+  GPI  +  G    V+VS+ ELAK+VLK HDQ+ A R    SA   S    D+ ++  GP++ + RK+C  EL SPKR+ + + + ++EV   +  V   C    ++   I           +     AFG RF+  E
Sbjct:   37 VVGNLYDIKPVR--FRCFAEWAQSYGPIISVWFGSTLNVIVSNSELAKEVLKEHDQLLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFSPKRLEALRPIREDEVTSMVDSVYNHCTSTENLGKGILLRKHLGVVAFNNITRLAFGKRFVNSE 196          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.148e-14
Identity = 58/232 (25.00%), Postives = 104/232 (44.83%), Query Frame = 2
Query:  194 PHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRV--KARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVL 883
            PH + AK+A+K GPI Y+++G    VV S+   AK  LKT D  F++RP    A H++    D+ F+P GP W+  RK+    +L  K + ++  V   E+   +  +   +  G    ++D++     +         R     ++G++     ++ +E+  +   F  GDF  +  W   L G    + KG + L    D++  K  +  +          G  DF+D +
Sbjct:   56 PHVALAKMAKKYGPIMYLKVGTCGMVVASTPNAAKAFLKTLDINFSNRPPNAGATHMAYNAQDMVFAPYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHMLKSMFDASHVGERIVVADMLTFAMANMIGQVMLSKRVF--VEKGKEVNEFKNMVVELMTVAGYFNIGDFIPQIAWMD-LQG----IEKGMKKLHKKFDDLLTKMFEEHEATSNER---KGKPDFLDFI 277          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.958e-14
Identity = 69/305 (22.62%), Postives = 135/305 (44.26%), Query Frame = 2
Query:   38 PEILFLSFVVSTAILYMIXXXXXXXXXXXXXXXXXXXXXIIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRV--KARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGW-LTGYTPRVIKGSRNLLNAVDEIFDKTSK---------RKQPLGTGAFLLHGNEDFIDVLRRVKKSDDLDV 916
            P+++ +S +VS  I Y                       IIGH+H+       H+SF  L+ + GP+F +  G V  VV S+   AKQ+L+T++  F  R    + K ++   + + F+P G YWR  +K+ + ELL  + +N+F+ +  +E ++ +  +  +AR     ++++ +     +   +   G        E ++++    V  +V E+   F   DF   W++    L G+  R+    +     V+ I  K  +         +K   G+G     G  DF+D+L    + ++ ++
Sbjct:    3 PQLVAVSVLVSALICYFFFRPYFHRYGKNLPPSPFFRLPIIGHMHMLGPLL--HQSFHNLSHRYGPLFSLNFGSVLCVVASTPHFAKQLLQTNELAFNCRIESTAVKKLTY-ESSLAFAPYGDYWRFIKKLSMNELLGSRSINNFQHLRAQETHQLLRLLSNRARAFEAVNITEELLKLTNNVISIMMVG--------EAEEAR---DVVRDVTEIFGEFNVSDFI--WLFKKMDLQGFGKRIEDLFQRFDTLVERIISKREQTRKDRRRNGKKGEQGSG----DGIRDFLDILLDCTEDENSEI 287          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.269e-13
Identity = 63/249 (25.30%), Postives = 117/249 (46.99%), Query Frame = 2
Query:  200 KSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARC------GLETDMSDLIFAFCTDFFCLAAFGVRFM----EDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVW-PGWLTGYTPRVIKGSRNLLNAVD-EIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVKKSDDL 910
            + F + AE+ GP+  +  G    VVVS+ ELAK+VLK +DQ  A RP   S +  S    D+ ++  GP++ + RK+C  EL +PKR+ + + + ++EV   +  V          G    + + +     +     AFG RFM    + +++G++ K + +  I++   L+        +E++W   WL      + K      + +  +I ++ +K  +  G         + F+D L  +K+  DL
Sbjct:   53 RCFQEWAERYGPVISVWFGSGLTVVVSTSELAKEVLKENDQQLADRPRNRSTQRFSRNGQDLIWADYGPHYIKVRKLCNLELFTPKRLEALRPIREDEVTAMVESVYRAATAPGNEGKPMVVRNHLSMVAFNNITRLAFGKRFMNANGDIDEQGREFKTIVNNGIKIGASLS-------VAEFIWYLRWLCPLNEELYKTHNERRDRLTMKIIEEHAKSLKESG-------AKQHFVDALFTLKQQYDL 287          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C75AK_ARATH (Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=CYP705A20 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.269e-13
Identity = 47/169 (27.81%), Postives = 83/169 (49.11%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRV--KARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLAS 655
            IIGHLH        HKS  +L+ K GP+ ++ +   P V+VSS  +A ++ K HD   +SR +    + + VG +    +P G YW+  +K+ VT+LL P+ +   + +  +E+ RF   +  KA      ++         +  C  + G  F E+  E ++ + L +
Sbjct:   48 IIGHLHHLLSSLA-HKSLQQLSSKYGPLLHLSIFNFPVVLVSSASVAYEIFKAHDLNISSRDNPPINESLLVGSSVFVGAPYGDYWKFMKKLLVTKLLGPQALERSRSIRADELERFYRSLLDKAMKKESVEIGKEATKLSINSICRMSMGRSFSEESGEAERVRGLVT 215          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.165e-13
Identity = 43/121 (35.54%), Postives = 63/121 (52.07%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRV 517
            IIG L L      PH S A +A K GPI Y++LG    VV S+ + A+  LKTHD  F++RP      +++    D+ F+  GP W+  RK+C   +L PK +  +  V   EV   +  +
Sbjct:   47 IIGALPLL--GTMPHVSLADMAVKYGPIMYLKLGSKGTVVASNPKAARAFLKTHDANFSNRPIDGGPTYLAYNAQDMVFAEYGPKWKLLRKLCSLHMLGPKALEDWAHVKVSEVGHMLKEM 165          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71A8_MENPI (Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.165e-13
Identity = 62/243 (25.51%), Postives = 102/243 (41.98%), Query Frame = 2
Query:  194 PHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKT--SKRKQPLGTGAFLLHGNEDFIDVLRRVKKSDDLDV 916
            PH +   +A K GPI  + LG V  V    +        +  ++   R S  +A  +            G YWRQ + ICV +LLS KRV SF+ V +EE    M ++    G   ++S +      D  C +A G ++   ++ G+K      +  E  ELL     GDF     W   + G+  RV +    +   +DE  +K    + + P           E+F+D+L  + +++   V
Sbjct:   69 PHHNLRSMARKHGPIMLLHLGSVRPVSSRRRPRGNHE-NSRSRLRRPRGSRSAALQLQGRVGGY-----GEYWRQLKTICVVQLLSNKRVQSFRSVREEETELLMKKIGDSSG-NVNLSHMFTQLTNDVVCRSAIGRKYGAGDENGEK---FLEILREFLELLGAISIGDFVPSLWWINRINGFDRRVDR----IAKEMDEFLEKVIHERLENPAA------KAEENFVDILLEIYRNNSAGV 291          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.693e-13
Identity = 44/135 (32.59%), Postives = 75/135 (55.56%), Query Frame = 2
Query:  158 IGHLHLFYKERKP--HKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLK-THDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMSD 553
            +GHLHL     KP  H+   + + + GPIF ++ G    VV++S  LA++     +D V +SRP  L+AK+V+     V  +P G +WR  R+IC  E+LS  R+ +F+ +  +E+ R ++R+        + +D
Sbjct:   38 VGHLHLM----KPPIHRLLQRYSNQYGPIFSLRFGSRRVVVITSPSLAQESFTGQNDIVLSSRPLQLTAKYVAYNHTTVGTAPYGDHWRNLRRICSQEILSSHRLINFQHIRKDEILRMLTRLSRYTQTSNESND 168          
The following BLAST results are available for this feature:
BLAST of FC878413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
C98A3_ARATH1.356e-1527.48Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C76C2_ARATH1.356e-1528.84Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C98A2_SOYBN6.731e-1531.48Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C75A2_SOLME1.148e-1425.00Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C93B1_GLYEC1.958e-1422.62Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C98A1_SORBI1.269e-1325.30Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C75AK_ARATH1.269e-1327.81Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=... [more]
C75A6_CAMME2.165e-1335.54Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
C71A8_MENPI2.165e-1325.51Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8... [more]
C81F1_ARATH3.693e-1332.59Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA49BF04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA49BF04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878413 ID=FC878413; Name=FC878413; organism=Citrus clementina; type=EST; length=918bp
AGGAAATTAAGTTGAGGGACTAATGGCCAACTTTAGCCCCGAAATCCTCT
TTCTGTCATTCGTTGTCTCGACGGCAATCCTCTACATGATTAATAATCGG
CGAAGGTCACTGCCAAATTCACCGTCACTGCCGTCACCACCAAACAAACT
TCCGATAATAGGTCACCTTCATCTCTTCTACAAAGAGCGCAAGCCACATA
AAAGTTTCGCTAAACTCGCAGAGAAGCTGGGTCCCATATTTTACATCCAG
CTCGGCCGAGTCCCCGCCGTTGTAGTCTCCTCTAAAGAGCTGGCCAAACA
AGTTCTCAAAACTCACGACCAGGTCTTCGCCAGCCGCCCAAGCATCCTCA
GCGCCAAGCACGTCTCCGTCGGCCCCGCTGACGTCACCTTCTCCCCCAAC
GGCCCTTACTGGCGCCAAGCTCGCAAGATCTGCGTCACCGAGTTACTCAG
CCCAAAACGAGTCAACTCTTTCAAAGTCGTCCTAGATGAGGAAGTGAACC
GGTTTATGAGCCGCGTGAAAGCCCGCTGTGGGTTAGAAACAGACATGAGT
GATCTTATTTTCGCCTTCTGTACTGATTTCTTTTGCCTTGCAGCATTTGG
GGTGAGGTTCATGGAAGATGAAGACGAAGGGCAAAAGAGTAAATACTTGG
CGAGTGTTTTCATAGAGGTTGAAGAGTTGCTGACAGGGTTTTATTATGGG
GATTTTTTCTCGGAGTGGGTTTGGCCCGGCTGGCTCACTGGGTACACACC
TAGGGTGATCAAGGGTTCTCGGAACTTGTTGAATGCTGTTGATGAGATTT
TCGATAAGACTTCCAAGAGGAAGCAGCCGCTGGGTACCGGCGCATTCTTA
TTGCACGGTAATGAAGATTTTATTGATGTTTTGCGTAGAGTCAAAAAAAG
CGACGATTTGGATGTGCC
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