FC878485

Overview
NameFC878485
Unique NameFC878485
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878485 vs. ExPASy Swiss-Prot
Match: COGT3_ARATH (Cytokinin-O-glucosyltransferase 3 OS=Arabidopsis thaliana GN=UGT73C5 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.156e-11
Identity = 56/231 (24.24%), Postives = 101/231 (43.72%), Query Frame = 2
Query:   77 VKEVVANLTDESPDSPRLAGFVLDMFCTCMIEVADEFKVPSYLFFTSGAAFLGFMLRVQALHDEENTTITELKDSDAVLEVPGLVN-------SVPAKVWPSVVFNKEWAEVLNQQARTFRGTKGIMVNTFEELESHAVRSFSDGKSKTPPLYPMGPILNIKGENYDLGEGGADKKADI-----MAWLDDQPESSVVFLCFGSWGSFGEDQVKEIACALEQSGHRFLWSLR 733
            ++E V  L +E   +PR +  + D       ++A +F +P  LF   G     F L    +  +    +  LK    +  VP   +        VP + +   V   +W ++ +        + G++VN+F+ELE    + + + +S     + +GP+        D  E G   K+DI     + WLD +   SV+++C GS  +    Q+KE+   LE+S   F+W +R
Sbjct:  107 LEEPVQKLIEEM--NPRPSCLISDFCLPYTSKIAKKFNIPKILFHGMGC----FCLLCMHVLRKNREILDNLKSDKELFTVPDFPDRVEFTRTQVPVETY---VPAGDWKDIFDGMVEANETSYGVIVNSFQELEPAYAKDYKEVRSGKA--WTIGPVSLCNKVGADKAERG--NKSDIDQDECLKWLDSKKHGSVLYVCLGSICNLPLSQLKELGLGLEESQRPFIWVIR 324          
BLAST of FC878485 vs. ExPASy Swiss-Prot
Match: ANGT_GENTR (Anthocyanin 3'-O-beta-glucosyltransferase OS=Gentiana triflora PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.156e-11
Identity = 56/211 (26.54%), Postives = 95/211 (45.02%), Query Frame = 2
Query:  125 RLAGFVLDMFCTCMIEVADEFKVPSYLFFTSGAAFLGFMLRVQALHDEENTTITELKDSDAVLEVPGLVNSVPAKVWP---SVVFNKEWAEVLNQQARTFRGTKGIMVNTFEELESHAVRSFSDGKSKTPPLYPMGPILNIKGENYDLGEGGADKKADIMA-----WLDDQPESSVVFLCFGSWGSFGEDQVKEIACALEQSGHRFLWSLR 733
            R    V D+F     + A +F +P  LF   G++    +       ++    ++   D   V ++P  +    ++V     +   N    E+    + +     G++VN+F ELE   V    +   +    + +GP+     E  D+ E G  KK+DI A     WLD +   SVV++CFGS  +F   Q+ E+A  LE+SG  F+W +R
Sbjct:  112 RPQALVADLFFYWANDAAAKFGIPRLLFH--GSSSFAMIAAESVRRNKPYKNLSSDSDPFVVPDIPDKIILTKSQVPTPDETEENNTHITEMWKNISESENDCYGVIVNSFYELEPDYVDYCKNVLGRRA--WHIGPLSLCNNEGEDVAERG--KKSDIDAHECLNWLDSKNPDSVVYVCFGSMANFNAAQLHELAMGLEESGQEFIWVVR 316          
The following BLAST results are available for this feature:
BLAST of FC878485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
COGT3_ARATH3.156e-1124.24Cytokinin-O-glucosyltransferase 3 OS=Arabidopsis t... [more]
ANGT_GENTR3.156e-1126.54Anthocyanin 3'-O-beta-glucosyltransferase OS=Genti... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ5YP09RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ5YP09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878485 ID=FC878485; Name=FC878485; organism=Citrus clementina; type=EST; length=736bp
CGACGATCAACCCGACAAGGAATCCACTCCCCCAAAAAGATTCTTCGGTC
ATTTCGTCGAAAGCAAAAAACCCCACGTCAAAGAAGTTGTCGCTAATCTA
ACTGACGAGTCACCTGACTCGCCTCGACTCGCTGGGTTTGTTCTCGACAT
GTTCTGCACGTGCATGATTGAAGTCGCAGATGAATTTAAAGTTCCTAGTT
ATCTTTTCTTCACGTCGGGTGCAGCTTTTCTGGGTTTCATGCTTCGTGTT
CAAGCTCTTCACGATGAGGAAAATACGACAATTACTGAGTTGAAAGACTC
GGATGCTGTGTTGGAAGTGCCGGGTCTAGTCAACTCAGTTCCCGCTAAGG
TTTGGCCTTCCGTTGTATTTAATAAAGAGTGGGCCGAAGTTCTTAACCAG
CAAGCAAGAACGTTTAGAGGGACTAAGGGTATTATGGTAAATACGTTCGA
AGAGTTAGAATCACATGCGGTGAGGTCTTTTTCTGATGGTAAGAGTAAGA
CCCCGCCACTTTACCCCATGGGGCCAATTTTGAATATCAAAGGTGAGAAC
TACGATTTGGGGGAAGGTGGAGCCGACAAGAAAGCGGATATCATGGCATG
GCTTGATGATCAGCCTGAGTCTTCGGTGGTGTTCTTGTGCTTTGGGAGCT
GGGGAAGCTTTGGTGAGGACCAAGTGAAGGAGATCGCATGTGCGCTCGAG
CAGAGCGGACACCGATTCCTATGGTCCTTGCGTCGG
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